RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 TUBA4BQ9H853 241 aa18.72■□□□□ 0.59
CDC42EP4-205ENST00000580315 RBPMS2Q6ZRY4 209 aaKnown RBP18.71■□□□□ 0.59
CDC42EP4-205ENST00000580315 TMEM61Q8N0U2 210 aa18.71■□□□□ 0.59
CDC42EP4-205ENST00000580315 CENPSQ8N2Z9 138 aa18.71■□□□□ 0.59
CDC42EP4-205ENST00000580315 WDR89Q96FK6 387 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP4-205ENST00000580315 CITED4Q96RK1 184 aa18.71■□□□□ 0.59
CDC42EP4-205ENST00000580315 NEURL2Q9BR09 285 aa18.71■□□□□ 0.59
CDC42EP4-205ENST00000580315 HIPK2Q9H2X6 1198 aa18.71■□□□□ 0.59
CDC42EP4-205ENST00000580315 C19orf73Q9NVV2 129 aa18.71■□□□□ 0.59
CDC42EP4-205ENST00000580315 TRAV25A0A0B4J276 109 aa18.7■□□□□ 0.58
CDC42EP4-205ENST00000580315 LCE6AA0A183 80 aa18.7■□□□□ 0.58
CDC42EP4-205ENST00000580315 DUXBA0A1W2PPF3 345 aa18.7■□□□□ 0.58
CDC42EP4-205ENST00000580315 CENPXA8MT69 81 aa18.7■□□□□ 0.58
CDC42EP4-205ENST00000580315 K7EMT4 169 aa18.7■□□□□ 0.58
CDC42EP4-205ENST00000580315 YIF1AO95070 293 aa18.7■□□□□ 0.58
CDC42EP4-205ENST00000580315 OPRK1P41145 380 aa18.7■□□□□ 0.58
CDC42EP4-205ENST00000580315 SMCO1Q147U7 214 aa18.7■□□□□ 0.58
CDC42EP4-205ENST00000580315 BSXQ3C1V8 233 aa18.7■□□□□ 0.58
CDC42EP4-205ENST00000580315 NMSQ5H8A3 153 aa18.7■□□□□ 0.58
CDC42EP4-205ENST00000580315 C15orf62A8K5M9 175 aa18.69■□□□□ 0.58
CDC42EP4-205ENST00000580315 SCGB2A1O75556 95 aa18.69■□□□□ 0.58
CDC42EP4-205ENST00000580315 SLC16A13Q7RTY0 426 aa18.69■□□□□ 0.58
CDC42EP4-205ENST00000580315 SELENOKQ9Y6D0 94 aa18.69■□□□□ 0.58
CDC42EP4-205ENST00000580315 BIRC6Q9NR09 4857 aa18.68■□□□□ 0.58
CDC42EP4-205ENST00000580315 A0A1B0GU03 582 aa18.68■□□□□ 0.58
CDC42EP4-205ENST00000580315 RPS10-NUDT3A0A1W2PQS6 291 aa18.68■□□□□ 0.58
CDC42EP4-205ENST00000580315 NXPH3O95157 252 aa18.68■□□□□ 0.58
CDC42EP4-205ENST00000580315 ANKRD55Q3KP44 614 aa18.68■□□□□ 0.58
CDC42EP4-205ENST00000580315 NOXA1Q86UR1 476 aa18.68■□□□□ 0.58
CDC42EP4-205ENST00000580315 SLC24A4Q8NFF2 622 aa18.68■□□□□ 0.58
CDC42EP4-205ENST00000580315 C7orf50Q9BRJ6 194 aaKnown RBP18.68■□□□□ 0.58
CDC42EP4-205ENST00000580315 CSMD3Q7Z407 3707 aa18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 IGHV3OR16-8A0A075B7F1 116 aa18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 LINC00854A0A1B0GVQ3 168 aa18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 SCAF4O95104 1147 aaKnown RBP18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 SFT2D2O95562 160 aa18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 UBE2MP61081 183 aaKnown RBP18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 TNFRSF9Q07011 255 aa18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 C2orf83Q53S99 150 aa18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 LAMTOR1Q6IAA8 161 aa18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 LRTM2Q8N967 370 aa18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 OR1S1Q8NH92 325 aa18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 SDHCQ99643 169 aaPredicted RBP18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 TM2D3Q9BRN9 247 aa18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 HSPB7Q9UBY9 170 aa18.67■□□□□ 0.58
CDC42EP4-205ENST00000580315 LYSTQ99698 3801 aa18.66■□□□□ 0.58
CDC42EP4-205ENST00000580315 ZNF207O43670 478 aaKnown RBP18.66■□□□□ 0.58
CDC42EP4-205ENST00000580315 NDUFB6O95139 128 aa18.66■□□□□ 0.58
CDC42EP4-205ENST00000580315 CD7P09564 240 aa18.66■□□□□ 0.58
CDC42EP4-205ENST00000580315 IL7P13232 177 aa18.66■□□□□ 0.58
CDC42EP4-205ENST00000580315 PPP1R1AQ13522 171 aa18.66■□□□□ 0.58
CDC42EP4-205ENST00000580315 ZFAND6Q6FIF0 208 aa18.66■□□□□ 0.58
CDC42EP4-205ENST00000580315 OR52B4Q8NGK2 314 aa18.66■□□□□ 0.58
CDC42EP4-205ENST00000580315 RNASEH2CQ8TDP1 164 aaKnown RBP18.66■□□□□ 0.58
CDC42EP4-205ENST00000580315 STARD9Q9P2P6 4700 aa18.66■□□□□ 0.58
CDC42EP4-205ENST00000580315 TMEM50AO95807 157 aa18.65■□□□□ 0.58
CDC42EP4-205ENST00000580315 OR4X1Q8NH49 305 aa18.65■□□□□ 0.58
CDC42EP4-205ENST00000580315 OR10C1Q96KK4 312 aa18.65■□□□□ 0.58
CDC42EP4-205ENST00000580315 GINS3Q9BRX5 216 aa18.65■□□□□ 0.58
CDC42EP4-205ENST00000580315 FNDC4Q9H6D8 234 aaPredicted RBP18.65■□□□□ 0.58
CDC42EP4-205ENST00000580315 OR11H12B2RN74 326 aa18.64■□□□□ 0.57
CDC42EP4-205ENST00000580315 CLN5O75503 358 aa18.64■□□□□ 0.57
CDC42EP4-205ENST00000580315 NPY1RP25929 384 aa18.64■□□□□ 0.57
CDC42EP4-205ENST00000580315 ZNF600Q6ZNG1 722 aa18.64■□□□□ 0.57
CDC42EP4-205ENST00000580315 DTD1Q8TEA8 209 aa18.64■□□□□ 0.57
CDC42EP4-205ENST00000580315 SMPXQ9UHP9 88 aa18.64■□□□□ 0.57
CDC42EP4-205ENST00000580315 TMED3Q9Y3Q3 217 aa18.64■□□□□ 0.57
CDC42EP4-205ENST00000580315 U3KQ87 197 aa18.64■□□□□ 0.57
CDC42EP4-205ENST00000580315 TRAV14DV4A0A0A6YYC5 116 aa18.63■□□□□ 0.57
CDC42EP4-205ENST00000580315 IGHV7-4-1A0A0J9YVY3 117 aa18.63■□□□□ 0.57
CDC42EP4-205ENST00000580315 IFNA10P01566 189 aa18.63■□□□□ 0.57
CDC42EP4-205ENST00000580315 SLC25A4P12235 298 aa18.63■□□□□ 0.57
CDC42EP4-205ENST00000580315 ETFRF1Q6IPR1 90 aa18.63■□□□□ 0.57
CDC42EP4-205ENST00000580315 TMEM116Q8NCL8 245 aa18.63■□□□□ 0.57
CDC42EP4-205ENST00000580315 SPAG8Q99932 426 aaPredicted RBP18.63■□□□□ 0.57
CDC42EP4-205ENST00000580315 RBKSQ9H477 322 aa18.63■□□□□ 0.57
CDC42EP4-205ENST00000580315 EDA2RQ9HAV5 297 aa18.63■□□□□ 0.57
CDC42EP4-205ENST00000580315 DNAH1Q9P2D7 4330 aa18.63■□□□□ 0.57
CDC42EP4-205ENST00000580315 TRAV30A0A087WSZ9 112 aa18.62■□□□□ 0.57
CDC42EP4-205ENST00000580315 TSPAN4O14817 238 aa18.62■□□□□ 0.57
CDC42EP4-205ENST00000580315 SLC25A6P12236 298 aa18.62■□□□□ 0.57
CDC42EP4-205ENST00000580315 BMI1P35226 326 aa18.62■□□□□ 0.57
CDC42EP4-205ENST00000580315 MLANAQ16655 118 aa18.62■□□□□ 0.57
CDC42EP4-205ENST00000580315 TOMM20LQ6UXN7 152 aa18.62■□□□□ 0.57
CDC42EP4-205ENST00000580315 DEFB125Q8N687 156 aa18.62■□□□□ 0.57
CDC42EP4-205ENST00000580315 ZNF414Q96IQ9 312 aa18.62■□□□□ 0.57
CDC42EP4-205ENST00000580315 ATP5IP56385 69 aaPredicted RBP18.61■□□□□ 0.57
CDC42EP4-205ENST00000580315 CNPY1Q3B7I2 92 aa18.61■□□□□ 0.57
CDC42EP4-205ENST00000580315 RHPN1-AS1Q9BWJ2 59 aa18.61■□□□□ 0.57
CDC42EP4-205ENST00000580315 PUS1Q9Y606 427 aaKnown RBP eCLIP18.61■□□□□ 0.57
CDC42EP4-205ENST00000580315 HAGHQ16775 308 aa18.6■□□□□ 0.57
CDC42EP4-205ENST00000580315 LINC00299Q6ZSB3 139 aa18.6■□□□□ 0.57
CDC42EP4-205ENST00000580315 SRD5A3Q9H8P0 318 aa18.6■□□□□ 0.57
CDC42EP4-205ENST00000580315 MRPL36Q9P0J6 103 aaKnown RBP18.6■□□□□ 0.57
CDC42EP4-205ENST00000580315 C9orf170A2RU37 121 aa18.59■□□□□ 0.57
CDC42EP4-205ENST00000580315 FAM90A26D6RGX4 464 aa18.59■□□□□ 0.57
CDC42EP4-205ENST00000580315 CHEK1O14757 476 aa18.59■□□□□ 0.57
CDC42EP4-205ENST00000580315 PITX3O75364 302 aa18.59■□□□□ 0.57
CDC42EP4-205ENST00000580315 HOXB5P09067 269 aa18.59■□□□□ 0.57
CDC42EP4-205ENST00000580315 TMEM170AQ8WVE7 144 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms