RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 COQ8AQ8NI60 647 aa12.38□□□□□ -0.43
RARA-209ENST00000579727 TMEM190Q8WZ59 177 aa12.38□□□□□ -0.43
RARA-209ENST00000579727 ZNF414Q96IQ9 312 aa12.38□□□□□ -0.43
RARA-209ENST00000579727 SEC22CQ9BRL7 303 aa12.38□□□□□ -0.43
RARA-209ENST00000579727 C20orf24Q9BUV8 137 aa12.38□□□□□ -0.43
RARA-209ENST00000579727 ZNF436Q9C0F3 470 aaPredicted RBP12.38□□□□□ -0.43
RARA-209ENST00000579727 MAGT1Q9H0U3 335 aa12.38□□□□□ -0.43
RARA-209ENST00000579727 PIGBOS1A0A0B4J2F0 54 aa12.37□□□□□ -0.43
RARA-209ENST00000579727 A8MWP6 167 aa12.37□□□□□ -0.43
RARA-209ENST00000579727 CORTO00230 105 aa12.37□□□□□ -0.43
RARA-209ENST00000579727 NUPL2O15504 423 aaKnown RBP12.37□□□□□ -0.43
RARA-209ENST00000579727 IFNA10P01566 189 aa12.37□□□□□ -0.43
RARA-209ENST00000579727 CBLN1P23435 193 aa12.37□□□□□ -0.43
RARA-209ENST00000579727 ASAH1Q13510 395 aa12.37□□□□□ -0.43
RARA-209ENST00000579727 CD300EQ496F6 205 aaPredicted RBP12.37□□□□□ -0.43
RARA-209ENST00000579727 MZT2BQ6NZ67 158 aa12.37□□□□□ -0.43
RARA-209ENST00000579727 DUSP18Q8NEJ0 188 aa12.37□□□□□ -0.43
RARA-209ENST00000579727 SIGLEC8Q9NYZ4 499 aa12.37□□□□□ -0.43
RARA-209ENST00000579727 NDUFA4O00483 81 aa12.36□□□□□ -0.43
RARA-209ENST00000579727 YIF1AO95070 293 aa12.36□□□□□ -0.43
RARA-209ENST00000579727 C2orf83Q53S99 150 aa12.36□□□□□ -0.43
RARA-209ENST00000579727 BTNL8Q6UX41 500 aa12.36□□□□□ -0.43
RARA-209ENST00000579727 UXS1Q8NBZ7 420 aa12.36□□□□□ -0.43
RARA-209ENST00000579727 ATP6V0BQ99437 205 aa12.36□□□□□ -0.43
RARA-209ENST00000579727 TXN2Q99757 166 aa12.36□□□□□ -0.43
RARA-209ENST00000579727 MLXQ9UH92 298 aa12.36□□□□□ -0.43
RARA-209ENST00000579727 UFC1Q9Y3C8 167 aa12.36□□□□□ -0.43
RARA-209ENST00000579727 LSM4Q9Y4Z0 139 aaKnown RBP12.36□□□□□ -0.43
RARA-209ENST00000579727 CCSO14618 274 aa12.35□□□□□ -0.43
RARA-209ENST00000579727 H2AFB2P0C5Z0 115 aa12.35□□□□□ -0.43
RARA-209ENST00000579727 FCGR2BP31994 310 aaPredicted RBP12.35□□□□□ -0.43
RARA-209ENST00000579727 NPBWR1P48145 328 aa12.35□□□□□ -0.43
RARA-209ENST00000579727 DEFB114Q30KQ6 69 aa12.35□□□□□ -0.43
RARA-209ENST00000579727 LCN12Q6JVE5 192 aa12.35□□□□□ -0.43
RARA-209ENST00000579727 PALMDQ9NP74 551 aa12.35□□□□□ -0.43
RARA-209ENST00000579727 GAR1Q9NY12 217 aaKnown RBP12.35□□□□□ -0.43
RARA-209ENST00000579727 PAIP2BQ9ULR5 123 aaKnown RBP12.35□□□□□ -0.43
RARA-209ENST00000579727 COL7A1Q02388 2944 aa12.35□□□□□ -0.43
RARA-209ENST00000579727 SORL1Q92673 2214 aa12.34□□□□□ -0.43
RARA-209ENST00000579727 WRBO00258 174 aa12.34□□□□□ -0.43
RARA-209ENST00000579727 TMEM50AO95807 157 aa12.34□□□□□ -0.43
RARA-209ENST00000579727 IFNA21P01568 189 aa12.34□□□□□ -0.43
RARA-209ENST00000579727 SLC25A6P12236 298 aa12.34□□□□□ -0.43
RARA-209ENST00000579727 RELQ04864 619 aaPredicted RBP12.34□□□□□ -0.43
RARA-209ENST00000579727 ENKURQ8TC29 256 aa12.34□□□□□ -0.43
RARA-209ENST00000579727 MITD1Q8WV92 249 aa12.34□□□□□ -0.43
RARA-209ENST00000579727 WDR89Q96FK6 387 aaPredicted RBP12.34□□□□□ -0.43
RARA-209ENST00000579727 CACFD1Q9UGQ2 172 aa12.34□□□□□ -0.43
RARA-209ENST00000579727 IGHV3-49A0A0A0MS15 119 aa12.33□□□□□ -0.44
RARA-209ENST00000579727 RPS10-NUDT3A0A1W2PQS6 291 aa12.33□□□□□ -0.44
RARA-209ENST00000579727 H3BP45 60 aa12.33□□□□□ -0.44
RARA-209ENST00000579727 CLN5O75503 358 aa12.33□□□□□ -0.44
RARA-209ENST00000579727 SCGB1D2O95969 90 aa12.33□□□□□ -0.44
RARA-209ENST00000579727 RND2P52198 227 aa12.33□□□□□ -0.44
RARA-209ENST00000579727 GUCA2BQ16661 112 aa12.33□□□□□ -0.44
RARA-209ENST00000579727 TMEM61Q8N0U2 210 aa12.33□□□□□ -0.44
RARA-209ENST00000579727 RNASEH2CQ8TDP1 164 aaKnown RBP12.33□□□□□ -0.44
RARA-209ENST00000579727 OR10C1Q96KK4 312 aa12.33□□□□□ -0.44
RARA-209ENST00000579727 DAZ1Q9NQZ3 744 aaKnown RBP12.33□□□□□ -0.44
RARA-209ENST00000579727 C15orf62A8K5M9 175 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 FAM90A26D6RGX4 464 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 SYNGR2O43760 224 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 SCAF4O95104 1147 aaKnown RBP12.32□□□□□ -0.44
RARA-209ENST00000579727 IFNA4P05014 189 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 POLR2GP62487 172 aaKnown RBP eCLIP12.32□□□□□ -0.44
RARA-209ENST00000579727 IAH1Q2TAA2 248 aaPredicted RBP12.32□□□□□ -0.44
RARA-209ENST00000579727 TIGITQ495A1 244 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 PRSS54Q6PEW0 395 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 OR4D5Q8NGN0 318 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 OR2K2Q8NGT1 345 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 OR4X1Q8NH49 305 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 ZNF431Q8TF32 576 aaPredicted RBP12.32□□□□□ -0.44
RARA-209ENST00000579727 ACY3Q96HD9 319 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 TECRQ9NZ01 308 aaKnown RBP12.32□□□□□ -0.44
RARA-209ENST00000579727 MRPL27Q9P0M9 148 aaKnown RBP12.32□□□□□ -0.44
RARA-209ENST00000579727 PUS1Q9Y606 427 aaKnown RBP eCLIP12.32□□□□□ -0.44
RARA-209ENST00000579727 SMAD5-AS1Q9Y6J3 95 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 U3KQ87 197 aa12.32□□□□□ -0.44
RARA-209ENST00000579727 TENM3Q9P273 2699 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 IGHV3OR16-13A0A075B7E8 117 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 IGHV3-74A0A0B4J1X5 117 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 ZNF785A8K8V0 405 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 MED6O75586 246 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 C8orf88P0DMB2 117 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 ELLP55199 621 aaPredicted RBP12.31□□□□□ -0.44
RARA-209ENST00000579727 CD69Q07108 199 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 TOMM20LQ6UXN7 152 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 ZNF600Q6ZNG1 722 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 SLC16A13Q7RTY0 426 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 NRARPQ7Z6K4 114 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 Q8N1Y9 231 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 GSKIPQ9P0R6 139 aa12.31□□□□□ -0.44
RARA-209ENST00000579727 FAM25EA8MYX2 175 aa12.3□□□□□ -0.44
RARA-209ENST00000579727 SSSCA1O60232 199 aa12.3□□□□□ -0.44
RARA-209ENST00000579727 NKX2-1P43699 371 aaPredicted RBP12.3□□□□□ -0.44
RARA-209ENST00000579727 CD81P60033 236 aa12.3□□□□□ -0.44
RARA-209ENST00000579727 DCTN2Q13561 401 aaKnown RBP12.3□□□□□ -0.44
RARA-209ENST00000579727 GTSCR1Q86UQ5 136 aa12.3□□□□□ -0.44
RARA-209ENST00000579727 NOXA1Q86UR1 476 aa12.3□□□□□ -0.44
RARA-209ENST00000579727 C12orf45Q8N5I9 185 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms