RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	C2orf83	Q53S99	150 aa		10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	BTNL8	Q6UX41	500 aa		10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TMEM61	Q8N0U2	210 aa		10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	CENPS	Q8N2Z9	138 aa		10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	WDR89	Q96FK6	387 aa	Predicted RBP	10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	ASCL2	Q99929	193 aa		10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	NEURL2	Q9BR09	285 aa		10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	HIPK2	Q9H2X6	1198 aa		10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	HEYL	Q9NQ87	328 aa	Predicted RBP	10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	HSPB7	Q9UBY9	170 aa		10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	CENPX	A8MT69	81 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	CEBPZOS	A8MTT3	80 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	IGHV3-48	P01763	117 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	IL7	P13232	177 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	VAMP1	P23763	118 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	OPRK1	P41145	380 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	CD81	P60033	236 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	PPP1R1A	Q13522	171 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	GUCA2B	Q16661	112 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	ANKRD55	Q3KP44	614 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	NOXA1	Q86UR1	476 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SLC24A4	Q8NFF2	622 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	OR4X1	Q8NH49	305 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	C20orf24	Q9BUV8	137 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TMED3	Q9Y3Q3	217 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501		U3KQ87	197 aa		10.25	□□□□□ -0.77
CSNK1D-208	ENST00000578501	LCE6A	A0A183	80 aa		10.24	□□□□□ -0.77
CSNK1D-208	ENST00000578501	PITX3	O75364	302 aa		10.24	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TMEM50A	O95807	157 aa		10.24	□□□□□ -0.77
CSNK1D-208	ENST00000578501	ATP5I	P56385	69 aa	Predicted RBP	10.24	□□□□□ -0.77
CSNK1D-208	ENST00000578501	CNPY1	Q3B7I2	92 aa		10.24	□□□□□ -0.77
CSNK1D-208	ENST00000578501	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.24	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TUBA4B	Q9H853	241 aa		10.24	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SMPX	Q9UHP9	88 aa		10.24	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TRAV30	A0A087WSZ9	112 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	FAM90A26	D6RGX4	464 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TSPAN4	O14817	238 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	CLN5	O75503	358 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SCGB2A1	O75556	95 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	YIF1A	O95070	293 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	CD7	P09564	240 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SLC25A4	P12235	298 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	BTC	P35070	178 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	LAMTOR1	Q6IAA8	161 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	ZNF600	Q6ZNG1	722 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SLC16A13	Q7RTY0	426 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	DTD1	Q8TEA8	209 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SPAG8	Q99932	426 aa	Predicted RBP	10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TM2D3	Q9BRN9	247 aa		10.23	□□□□□ -0.77
CSNK1D-208	ENST00000578501	IGHV3OR16-8	A0A075B7F1	116 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TRAV14DV4	A0A0A6YYC5	116 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	IGHV7-4-1	A0A0J9YVY3	117 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501		A6NHS1	94 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	OR11H12	B2RN74	326 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SCAF4	O95104	1147 aa	Known RBP	10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	NXPH3	O95157	252 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	NPY1R	P25929	384 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	MLANA	Q16655	118 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	ETFRF1	Q6IPR1	90 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TOMM20L	Q6UXN7	152 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TMEM116	Q8NCL8	245 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	OR52B4	Q8NGK2	314 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	OR1S1	Q8NH92	325 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TMEM170A	Q8WVE7	144 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	GINS3	Q9BRX5	216 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	CCDC32	Q9BV29	185 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	RBKS	Q9H477	322 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	ZMAT4	Q9H898	229 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	MRPL36	Q9P0J6	103 aa	Known RBP	10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TENM2	Q9NT68	2774 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	BIRC6	Q9NR09	4857 aa		10.22	□□□□□ -0.77
CSNK1D-208	ENST00000578501	LINC00854	A0A1B0GVQ3	168 aa		10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	C9orf170	A2RU37	121 aa		10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	CHEK1	O14757	476 aa		10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	PLA2G10	O15496	165 aa		10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	ZNF207	O43670	478 aa	Known RBP	10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	IFNA10	P01566	189 aa		10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	LYL1	P12980	280 aa		10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	PRSS54	Q6PEW0	395 aa		10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	RHPN1-AS1	Q9BWJ2	59 aa		10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	KRTAP17-1	Q9BYP8	105 aa		10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	ZFAND3	Q9H8U3	227 aa		10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SELENOK	Q9Y6D0	94 aa		10.21	□□□□□ -0.77
CSNK1D-208	ENST00000578501	MED6	O75586	246 aa		10.2	□□□□□ -0.78
CSNK1D-208	ENST00000578501	IGKV1-17	P01599	117 aa		10.2	□□□□□ -0.78
CSNK1D-208	ENST00000578501	CD5	P06127	495 aa		10.2	□□□□□ -0.78
CSNK1D-208	ENST00000578501	OR4E1	P0C645	316 aa		10.2	□□□□□ -0.78
CSNK1D-208	ENST00000578501	BMI1	P35226	326 aa		10.2	□□□□□ -0.78
CSNK1D-208	ENST00000578501	DHRS2	Q13268	280 aa		10.2	□□□□□ -0.78
CSNK1D-208	ENST00000578501	HAGH	Q16775	308 aa		10.2	□□□□□ -0.78
CSNK1D-208	ENST00000578501	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.2	□□□□□ -0.78
CSNK1D-208	ENST00000578501	LYG2	Q86SG7	212 aa		10.2	□□□□□ -0.78
CSNK1D-208	ENST00000578501	DEFB125	Q8N687	156 aa		10.2	□□□□□ -0.78
CSNK1D-208	ENST00000578501	OR1S2	Q8NGQ3	325 aa		10.2	□□□□□ -0.78
CSNK1D-208	ENST00000578501	COQ8A	Q8NI60	647 aa		10.2	□□□□□ -0.78

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