RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 YIF1AO95070 293 aa12.28□□□□□ -0.44
CDK5RAP3-206ENST00000578018 IGKV1-5P01602 117 aa12.28□□□□□ -0.44
CDK5RAP3-206ENST00000578018 PGAM2P15259 253 aa12.28□□□□□ -0.44
CDK5RAP3-206ENST00000578018 ATF4P18848 351 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-206ENST00000578018 SPINK9Q5DT21 86 aa12.28□□□□□ -0.44
CDK5RAP3-206ENST00000578018 APRG1Q8IVJ8 170 aa12.28□□□□□ -0.44
CDK5RAP3-206ENST00000578018 MARCH1Q8TCQ1 289 aa12.28□□□□□ -0.44
CDK5RAP3-206ENST00000578018 PINX1Q96BK5 328 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-206ENST00000578018 CCDC32Q9BV29 185 aa12.28□□□□□ -0.44
CDK5RAP3-206ENST00000578018 GPR132Q9UNW8 380 aa12.28□□□□□ -0.44
CDK5RAP3-206ENST00000578018 GNG7O60262 68 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 P0C879 139 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 IL7P13232 177 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 PI3P19957 117 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 PPP5CP53041 499 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 PIGPP57054 158 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 ERHP84090 104 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 ZNF124Q15973 351 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 TRIQKQ629K1 86 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 FAM90A2PQ658T7 463 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 SCGB3A2Q96PL1 93 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 TP53RKQ96S44 253 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 MCUBQ9NWR8 336 aa12.27□□□□□ -0.45
CDK5RAP3-206ENST00000578018 IGHV3OR16-13A0A075B7E8 117 aa12.26□□□□□ -0.45
CDK5RAP3-206ENST00000578018 TRAV14DV4A0A0A6YYC5 116 aa12.26□□□□□ -0.45
CDK5RAP3-206ENST00000578018 IGHV3-74A0A0B4J1X5 117 aa12.26□□□□□ -0.45
CDK5RAP3-206ENST00000578018 NAP1L6A6NFF2 107 aa12.26□□□□□ -0.45
CDK5RAP3-206ENST00000578018 B3GALNT1O75752 331 aa12.26□□□□□ -0.45
CDK5RAP3-206ENST00000578018 TFPI2P48307 235 aa12.26□□□□□ -0.45
CDK5RAP3-206ENST00000578018 CCDC71LQ8N9Z2 235 aa12.26□□□□□ -0.45
CDK5RAP3-206ENST00000578018 C7orf50Q9BRJ6 194 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-206ENST00000578018 RTBDNQ9BSG5 229 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-206ENST00000578018 IGKV3-7A0A075B6H7 116 aa12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 A0A0B4J293 547 aa12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 INS-IGF2F8WCM5 200 aa12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 INPP1P49441 399 aa12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 AKR1C2P52895 323 aa12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 CEMP1Q6PRD7 247 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 TOMM20LQ6UXN7 152 aa12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 SLC35G3Q8N808 338 aa12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 SLC25A21Q9BQT8 299 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 GINS3Q9BRX5 216 aa12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 WDR12Q9GZL7 423 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 ZFAND3Q9H8U3 227 aa12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 C14orf166Q9Y224 244 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 KMT2AQ03164 3969 aa12.25□□□□□ -0.45
CDK5RAP3-206ENST00000578018 ST8SIA3O43173 380 aa12.24□□□□□ -0.45
CDK5RAP3-206ENST00000578018 NPBWR1P48145 328 aa12.24□□□□□ -0.45
CDK5RAP3-206ENST00000578018 CMC4P56277 68 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-206ENST00000578018 ZNF846Q147U1 533 aa12.24□□□□□ -0.45
CDK5RAP3-206ENST00000578018 PVRIGQ6DKI7 326 aa12.24□□□□□ -0.45
CDK5RAP3-206ENST00000578018 GBGT1Q8N5D6 347 aa12.24□□□□□ -0.45
CDK5RAP3-206ENST00000578018 TMEM217Q8N7C4 229 aa12.24□□□□□ -0.45
CDK5RAP3-206ENST00000578018 ST8SIA2Q92186 375 aa12.24□□□□□ -0.45
CDK5RAP3-206ENST00000578018 VSIRQ9H7M9 311 aa12.24□□□□□ -0.45
CDK5RAP3-206ENST00000578018 COPZ2Q9P299 210 aa12.24□□□□□ -0.45
CDK5RAP3-206ENST00000578018 FRAS1Q86XX4 4008 aa12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 C3orf85A0A1B0GTC6 90 aa12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 CENPXA8MT69 81 aa12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 LY6G6CO95867 125 aa12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 APOHP02749 345 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 CD5P06127 495 aa12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 RNASE2P10153 161 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 SNCAP37840 140 aa12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 ZNF600Q6ZNG1 722 aa12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 TCF24Q7RTU0 167 aa12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 DUSP18Q8NEJ0 188 aa12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 PUS1Q9Y606 427 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDK5RAP3-206ENST00000578018 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 MPTX1A8MV57 137 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 CORTO00230 105 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 PLA2G10O15496 165 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 ATG12O94817 140 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 IFNA17P01571 189 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 UCP1P25874 307 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 TRIM16LQ309B1 348 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 SP6Q3SY56 376 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 LILRB2Q8N423 598 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 GATAD1Q8WUU5 269 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 PDCD10Q9BUL8 212 aa12.22□□□□□ -0.45
CDK5RAP3-206ENST00000578018 A0A1B0GU03 582 aa12.21□□□□□ -0.45
CDK5RAP3-206ENST00000578018 CRYM-AS1A6NIL9 109 aa12.21□□□□□ -0.45
CDK5RAP3-206ENST00000578018 TMEM50AO95807 157 aa12.21□□□□□ -0.45
CDK5RAP3-206ENST00000578018 HOXA1P49639 335 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-206ENST00000578018 PAFAH1B2P68402 229 aa12.21□□□□□ -0.45
CDK5RAP3-206ENST00000578018 RBMS2Q15434 407 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-206ENST00000578018 TMEM230Q96A57 120 aa12.21□□□□□ -0.45
CDK5RAP3-206ENST00000578018 MS4A6AQ9H2W1 248 aa12.21□□□□□ -0.45
CDK5RAP3-206ENST00000578018 FNDC4Q9H6D8 234 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-206ENST00000578018 NAA60Q9H7X0 242 aa12.21□□□□□ -0.45
CDK5RAP3-206ENST00000578018 MRPL36Q9P0J6 103 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-206ENST00000578018 AGRNO00468 2067 aa12.2□□□□□ -0.46
CDK5RAP3-206ENST00000578018 TRAV2A0A0B4J234 112 aa12.2□□□□□ -0.46
CDK5RAP3-206ENST00000578018 IGHV3-66A0A0C4DH42 116 aa12.2□□□□□ -0.46
CDK5RAP3-206ENST00000578018 TEX13DA0A0J9YY54 714 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-206ENST00000578018 DFFBO76075 338 aa12.2□□□□□ -0.46
CDK5RAP3-206ENST00000578018 BTCP35070 178 aa12.2□□□□□ -0.46
CDK5RAP3-206ENST00000578018 SUB1P53999 127 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDK5RAP3-206ENST00000578018 DHODHQ02127 395 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms