RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 RBKSQ9H477 322 aa14.61□□□□□ -0.07
SS18-208ENST00000577751 UFC1Q9Y3C8 167 aa14.61□□□□□ -0.07
SS18-208ENST00000577751 GNG7O60262 68 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 TCRBP04435 133 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 HOXB5P09067 269 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 NPBWR1P48145 328 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 ZNF846Q147U1 533 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 GGNBP1Q5YKI7 109 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 Q8N1Y9 231 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 UXS1Q8NBZ7 420 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 RNASEH2CQ8TDP1 164 aaKnown RBP14.6□□□□□ -0.07
SS18-208ENST00000577751 DTD1Q8TEA8 209 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 MARC2Q969Z3 335 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 B9D2Q9BPU9 175 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 C20orf85Q9H1P6 137 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 MRPL36Q9P0J6 103 aaKnown RBP14.6□□□□□ -0.07
SS18-208ENST00000577751 MRPL27Q9P0M9 148 aaKnown RBP14.6□□□□□ -0.07
SS18-208ENST00000577751 TBC1D24Q9ULP9 559 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 SMAD5-AS1Q9Y6J3 95 aa14.6□□□□□ -0.07
SS18-208ENST00000577751 ZNF785A8K8V0 405 aa14.59□□□□□ -0.07
SS18-208ENST00000577751 FAM90A26D6RGX4 464 aa14.59□□□□□ -0.07
SS18-208ENST00000577751 K7EMT4 169 aa14.59□□□□□ -0.07
SS18-208ENST00000577751 TMEM50AO95807 157 aa14.59□□□□□ -0.07
SS18-208ENST00000577751 NPY1RP25929 384 aa14.59□□□□□ -0.07
SS18-208ENST00000577751 OPRK1P41145 380 aa14.59□□□□□ -0.07
SS18-208ENST00000577751 RELQ04864 619 aaPredicted RBP14.59□□□□□ -0.07
SS18-208ENST00000577751 C4orf46Q504U0 113 aa14.59□□□□□ -0.07
SS18-208ENST00000577751 COQ8AQ8NI60 647 aa14.59□□□□□ -0.07
SS18-208ENST00000577751 DYNLRB2Q8TF09 96 aa14.59□□□□□ -0.07
SS18-208ENST00000577751 MLXQ9UH92 298 aa14.59□□□□□ -0.07
SS18-208ENST00000577751 U3KQ87 197 aa14.59□□□□□ -0.07
SS18-208ENST00000577751 ADAP1O75689 374 aa14.58□□□□□ -0.08
SS18-208ENST00000577751 UPK1BO75841 260 aa14.58□□□□□ -0.08
SS18-208ENST00000577751 NOXA1Q86UR1 476 aa14.58□□□□□ -0.08
SS18-208ENST00000577751 OR4X1Q8NH49 305 aa14.58□□□□□ -0.08
SS18-208ENST00000577751 OR10C1Q96KK4 312 aa14.58□□□□□ -0.08
SS18-208ENST00000577751 DAZ1Q9NQZ3 744 aaKnown RBP14.58□□□□□ -0.08
SS18-208ENST00000577751 C15orf62A8K5M9 175 aa14.57□□□□□ -0.08
SS18-208ENST00000577751 CLN5O75503 358 aa14.57□□□□□ -0.08
SS18-208ENST00000577751 ATP5IP56385 69 aaPredicted RBP14.57□□□□□ -0.08
SS18-208ENST00000577751 ASAH1Q13510 395 aa14.57□□□□□ -0.08
SS18-208ENST00000577751 MITD1Q8WV92 249 aa14.57□□□□□ -0.08
SS18-208ENST00000577751 RPS10-NUDT3A0A1W2PQS6 291 aa14.56□□□□□ -0.08
SS18-208ENST00000577751 IFNA10P01566 189 aa14.56□□□□□ -0.08
SS18-208ENST00000577751 IFITM3Q01628 133 aa14.56□□□□□ -0.08
SS18-208ENST00000577751 MZT2BQ6NZ67 158 aa14.56□□□□□ -0.08
SS18-208ENST00000577751 OR52B4Q8NGK2 314 aa14.56□□□□□ -0.08
SS18-208ENST00000577751 TRAV6A0A075B6T7 132 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 IGHV3OR16-8A0A075B7F1 116 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 FAM240BA0A1B0GVZ2 78 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 MPTX1A8MV57 137 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 SLC25A4P12235 298 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 CD69Q07108 199 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 PRSS54Q6PEW0 395 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 BTNL8Q6UX41 500 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 TMEM61Q8N0U2 210 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 TMEM116Q8NCL8 245 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 C20orf24Q9BUV8 137 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 NUDT15Q9NV35 164 aa14.55□□□□□ -0.08
SS18-208ENST00000577751 TRAV30A0A087WSZ9 112 aa14.54□□□□□ -0.08
SS18-208ENST00000577751 A8MZ25 164 aa14.54□□□□□ -0.08
SS18-208ENST00000577751 MED6O75586 246 aa14.54□□□□□ -0.08
SS18-208ENST00000577751 IFNA21P01568 189 aa14.54□□□□□ -0.08
SS18-208ENST00000577751 ID3Q02535 119 aa14.54□□□□□ -0.08
SS18-208ENST00000577751 TOMM20LQ6UXN7 152 aa14.54□□□□□ -0.08
SS18-208ENST00000577751 ZNF600Q6ZNG1 722 aa14.54□□□□□ -0.08
SS18-208ENST00000577751 WDR89Q96FK6 387 aaPredicted RBP14.54□□□□□ -0.08
SS18-208ENST00000577751 SELENOKQ9Y6D0 94 aa14.54□□□□□ -0.08
SS18-208ENST00000577751 TRAV25A0A0B4J276 109 aa14.53□□□□□ -0.08
SS18-208ENST00000577751 ZNF207O43670 478 aaKnown RBP14.53□□□□□ -0.08
SS18-208ENST00000577751 SYNGR2O43760 224 aa14.53□□□□□ -0.08
SS18-208ENST00000577751 YIF1AO95070 293 aa14.53□□□□□ -0.08
SS18-208ENST00000577751 IGKV1-17P01599 117 aa14.53□□□□□ -0.08
SS18-208ENST00000577751 H2AFB2P0C5Z0 115 aa14.53□□□□□ -0.08
SS18-208ENST00000577751 ETFRF1Q6IPR1 90 aa14.53□□□□□ -0.08
SS18-208ENST00000577751 GTSCR1Q86UQ5 136 aa14.53□□□□□ -0.08
SS18-208ENST00000577751 ZFAND3Q9H8U3 227 aa14.53□□□□□ -0.08
SS18-208ENST00000577751 IGLC1P0CG04 106 aa14.52□□□□□ -0.09
SS18-208ENST00000577751 IGHV4-30-4P0DP06 118 aa14.52□□□□□ -0.09
SS18-208ENST00000577751 IAPPP10997 89 aa14.52□□□□□ -0.09
SS18-208ENST00000577751 RND2P52198 227 aa14.52□□□□□ -0.09
SS18-208ENST00000577751 OR4D5Q8NGN0 318 aa14.52□□□□□ -0.09
SS18-208ENST00000577751 CIB3Q96Q77 187 aaPredicted RBP14.52□□□□□ -0.09
SS18-208ENST00000577751 MAGT1Q9H0U3 335 aa14.52□□□□□ -0.09
SS18-208ENST00000577751 C19orf73Q9NVV2 129 aa14.52□□□□□ -0.09
SS18-208ENST00000577751 SMPXQ9UHP9 88 aa14.52□□□□□ -0.09
SS18-208ENST00000577751 PUS1Q9Y606 427 aaKnown RBP eCLIP14.52□□□□□ -0.09
SS18-208ENST00000577751 TRAV14DV4A0A0A6YYC5 116 aa14.51□□□□□ -0.09
SS18-208ENST00000577751 IGHV7-4-1A0A0J9YVY3 117 aa14.51□□□□□ -0.09
SS18-208ENST00000577751 FRMD6-AS1P0C7T7 363 aa14.51□□□□□ -0.09
SS18-208ENST00000577751 GUCA2BQ16661 112 aa14.51□□□□□ -0.09
SS18-208ENST00000577751 OR1S2Q8NGQ3 325 aa14.51□□□□□ -0.09
SS18-208ENST00000577751 ZNF431Q8TF32 576 aaPredicted RBP14.51□□□□□ -0.09
SS18-208ENST00000577751 WRBO00258 174 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 CHEK1O14757 476 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 SCGB2A1O75556 95 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 IFNA4P05014 189 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 CD7P09564 240 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 NHLRC4P0CG21 123 aaPredicted RBP14.5□□□□□ -0.09
SS18-208ENST00000577751 GPX4P36969 197 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms