RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 LYNX1P0DP58 116 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 G6PCP35575 357 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 LINC00205P59089 165 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 CT45A1Q5HYN5 189 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 MALRD1Q5VYJ5 2156 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 PRR27Q6MZM9 219 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 ZNF295-AS1Q8N0V1 137 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.26□□□□□ -0.61
RNF43-202ENST00000577625 ZNF439Q8NDP4 499 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 CT45A3Q8NHU0 189 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 SGMS2Q8NHU3 365 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 LEAP2Q969E1 77 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 RNF114Q9Y508 228 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 MYO18BQ8IUG5 2567 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 TRAV9-1A0A075B6T8 112 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 A0A1W2PPR1 153 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 SYNGR2O43760 224 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 COL8A2P25067 703 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 RPL31P62899 125 aaKnown RBP11.26□□□□□ -0.61
RNF43-202ENST00000577625 ZNF430Q9H8G1 570 aaPredicted RBP11.26□□□□□ -0.61
RNF43-202ENST00000577625 RPUSD1Q9UJJ7 312 aaKnown RBP11.26□□□□□ -0.61
RNF43-202ENST00000577625 AKAP6Q13023 2319 aa11.25□□□□□ -0.61
RNF43-202ENST00000577625 H3BP45 60 aa11.25□□□□□ -0.61
RNF43-202ENST00000577625 C19orf84I3L1E1 186 aa11.25□□□□□ -0.61
RNF43-202ENST00000577625 M0R1X1 148 aa11.25□□□□□ -0.61
RNF43-202ENST00000577625 RBFOX2O43251 390 aaKnown RBP eCLIP11.25□□□□□ -0.611e-7■■■■■ 34.5
RNF43-202ENST00000577625 NDUFB3O43676 98 aa11.25□□□□□ -0.61
RNF43-202ENST00000577625 HBG1P69891 147 aa11.25□□□□□ -0.61
RNF43-202ENST00000577625 HBG2P69892 147 aa11.25□□□□□ -0.61
RNF43-202ENST00000577625 RPL39P5Q59GN2 51 aa11.25□□□□□ -0.61
RNF43-202ENST00000577625 LRRC10Q5BKY1 277 aa11.25□□□□□ -0.61
RNF43-202ENST00000577625 PRAMEF5Q5TYX0 476 aa11.25□□□□□ -0.61
RNF43-202ENST00000577625 RPP25LQ8N5L8 163 aaKnown RBP11.25□□□□□ -0.61
RNF43-202ENST00000577625 WDR61Q9GZS3 305 aaKnown RBP11.25□□□□□ -0.61
RNF43-202ENST00000577625 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
RNF43-202ENST00000577625 CTXND1A0A1B0GTU2 59 aa11.24□□□□□ -0.61
RNF43-202ENST00000577625 RAB29O14966 203 aa11.24□□□□□ -0.61
RNF43-202ENST00000577625 FAM103A1Q9BTL3 118 aaKnown RBP11.24□□□□□ -0.61
RNF43-202ENST00000577625 CHODLQ9H9P2 273 aa11.24□□□□□ -0.61
RNF43-202ENST00000577625 NRN1Q9NPD7 142 aa11.24□□□□□ -0.61
RNF43-202ENST00000577625 TBL2Q9Y4P3 447 aaKnown RBP11.24□□□□□ -0.61
RNF43-202ENST00000577625 TIMM9Q9Y5J7 89 aa11.24□□□□□ -0.61
RNF43-202ENST00000577625 TOX4O94842 621 aa11.24□□□□□ -0.61
RNF43-202ENST00000577625 FSTL3O95633 263 aa11.24□□□□□ -0.61
RNF43-202ENST00000577625 REG1AP05451 166 aa11.24□□□□□ -0.61
RNF43-202ENST00000577625 PSG1P11464 419 aa11.24□□□□□ -0.61
RNF43-202ENST00000577625 C1orf229Q6ZS94 237 aaPredicted RBP11.24□□□□□ -0.61
RNF43-202ENST00000577625 H1FXQ92522 213 aaKnown RBP11.24□□□□□ -0.61
RNF43-202ENST00000577625 ZNF714Q96N38 554 aa11.24□□□□□ -0.61
RNF43-202ENST00000577625 SAA2-SAA4A0A096LPE2 208 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 FCGR3BO75015 233 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 SAA2P0DJI9 122 aaPredicted RBP11.23□□□□□ -0.61
RNF43-202ENST00000577625 CCL3L1P16619 93 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 IGFBP2P18065 325 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 CBLN1P23435 193 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 KIR2DS2P43631 304 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 TMEM200BQ69YZ2 307 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 H2BFWTQ7Z2G1 175 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 DTX2Q86UW9 622 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 NIT1Q86X76 327 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 DDB2Q92466 427 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 SFRP2Q96HF1 295 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 UHRF2Q96PU4 802 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.23□□□□□ -0.61
RNF43-202ENST00000577625 IGKV1D-33P01593 117 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 IGKV1-33P01594 117 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 PRRX1P54821 245 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 SLC25A48Q6ZT89 311 aaKnown RBP11.23□□□□□ -0.61
RNF43-202ENST00000577625 ZNF596Q8TC21 504 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 S1PR3Q99500 378 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 RAB1BQ9H0U4 201 aa11.23□□□□□ -0.61
RNF43-202ENST00000577625 MDFIC2A0A1B0GVS7 189 aa11.22□□□□□ -0.61
RNF43-202ENST00000577625 LY6HO94772 140 aa11.22□□□□□ -0.61
RNF43-202ENST00000577625 GATAD1Q8WUU5 269 aa11.22□□□□□ -0.61
RNF43-202ENST00000577625 TAF15Q92804 592 aaKnown RBP eCLIP11.22□□□□□ -0.614e-7■■■■□ 23.8
RNF43-202ENST00000577625 PSENENQ9NZ42 101 aa11.22□□□□□ -0.61
RNF43-202ENST00000577625 ZNF462Q96JM2 2506 aa11.22□□□□□ -0.61
RNF43-202ENST00000577625 F2Z2F3 143 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 PDE6DO43924 150 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 PAGE4O60829 102 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 IAPPP10997 89 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 NPPCP23582 126 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 AMTP48728 403 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 THBS3P49746 956 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 ARL16Q0P5N6 197 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 PMCHL1Q16048 86 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 OR4A47Q6IF82 309 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 OR4F17Q8NGA8 305 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 ADTRPQ96IZ2 230 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 SLC25A22Q9H936 323 aa11.21□□□□□ -0.61
RNF43-202ENST00000577625 TET2Q6N021 2002 aaPredicted RBP11.21□□□□□ -0.61
RNF43-202ENST00000577625 FAM90A9PA6NNJ1 464 aa11.21□□□□□ -0.62
RNF43-202ENST00000577625 C11orf94C9JXX5 98 aa11.21□□□□□ -0.62
RNF43-202ENST00000577625 DLX6P56179 175 aa11.21□□□□□ -0.62
RNF43-202ENST00000577625 KCNS1Q96KK3 526 aa11.21□□□□□ -0.62
RNF43-202ENST00000577625 MEGF9Q9H1U4 602 aa11.21□□□□□ -0.62
RNF43-202ENST00000577625 TRBV9A0A0B4J1U6 114 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 C17orf112F2Z3M2 114 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 CORTO00230 105 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 HLA-DRB5Q30154 266 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms