RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	KCNIP2	Q9NS61	270 aa		4.18	□□□□□ -1.74
TOM1L1-222	ENST00000575909	WASHC3	Q9Y3C0	194 aa		4.18	□□□□□ -1.74
TOM1L1-222	ENST00000575909	LOXHD1	Q8IVV2	1947 aa		4.18	□□□□□ -1.74
TOM1L1-222	ENST00000575909	ANKAR	Q7Z5J8	1434 aa		4.18	□□□□□ -1.74
TOM1L1-222	ENST00000575909	MAP2	P11137	1827 aa	Known RBP	4.18	□□□□□ -1.74
TOM1L1-222	ENST00000575909	PLXNC1	O60486	1568 aa		4.18	□□□□□ -1.74
TOM1L1-222	ENST00000575909	IQGAP2	Q13576	1575 aa		4.18	□□□□□ -1.74
TOM1L1-222	ENST00000575909	PHLPP1	O60346	1717 aa		4.18	□□□□□ -1.74
TOM1L1-222	ENST00000575909	SIGLEC1	Q9BZZ2	1709 aa		4.18	□□□□□ -1.74
TOM1L1-222	ENST00000575909	IQSEC2	Q5JU85	1478 aa		4.18	□□□□□ -1.74
TOM1L1-222	ENST00000575909	LRRC9	Q6ZRR7	1453 aa		4.18	□□□□□ -1.74
TOM1L1-222	ENST00000575909	ADGRB3	O60242	1522 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	IGHV2-26	A0A0B4J1V2	119 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	TMEM250	H0YL14	139 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909		K7EP34	96 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	SLC37A4	O43826	429 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	SS18L1	O75177	396 aa	Predicted RBP	4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	CYB5A	P00167	134 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	HLA-DRB1	P01911	266 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	GABRG2	P18507	467 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	CXCL2	P19875	107 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	CRYGS	P22914	178 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	OPRK1	P41145	380 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	CXCL5	P42830	114 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	CA7	P43166	264 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	PPIC	P45877	212 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	FOXA1	P55317	472 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	RBM11	P57052	281 aa	Known RBP	4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	TMEM258	P61165	79 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	RPS24	P62847	133 aa	Known RBP	4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	SEC11A	P67812	179 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	PLGLB1	Q02325	96 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	SLC38A11	Q08AI6	406 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	ENDOG	Q14249	297 aa	Known RBP	4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	MSMO1	Q15800	293 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	RRN3P1	Q2M238	152 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909		Q6ZRU5	148 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	FNDC9	Q8TBE3	224 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	TMEM158	Q8WZ71	300 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	ADAT1	Q9BUB4	502 aa	Known RBP	4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	NAA60	Q9H7X0	242 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	TMEM106B	Q9NUM4	274 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	ZNF222	Q9UK12	451 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	ENPP4	Q9Y6X5	453 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	SAMD9	Q5K651	1589 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	KNDC1	Q76NI1	1749 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	NKTR	P30414	1462 aa	Known RBP	4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	MROH1	Q8NDA8	1641 aa		4.17	□□□□□ -1.74
TOM1L1-222	ENST00000575909	TRIP11	Q15643	1979 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	LTBP1	Q14766	1721 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	MYO5C	Q9NQX4	1742 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	RGS12	O14924	1447 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909		A0A1W2PP18	115 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	NCBP2L	A6PVI3	153 aa	Known RBP	4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909		H7C1H1	209 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909		M0R1X1	148 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	PIR	O00625	290 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	KLF7	O75840	302 aa	Predicted RBP	4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	ZNF705D	P0CH99	300 aa	Predicted RBP	4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	ZNF705B	P0CI00	300 aa	Predicted RBP	4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	SDC2	P34741	201 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	SRP14	P37108	136 aa	Known RBP	4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	HES3	Q5TGS1	186 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909		Q6AWC8	147 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	XAF1	Q6GPH4	301 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	HRCT1	Q6UXD1	115 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	MKX	Q8IYA7	352 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	OR10AC1	Q8NH08	325 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	OR51H1	Q8NH63	302 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	NMNAT3	Q96T66	252 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	SDF2	Q99470	211 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	NPVF	Q9HCQ7	196 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	TMEM242	Q9NWH2	141 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	CACFD1	Q9UGQ2	172 aa		4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	ZNF646	O15015	1829 aa	Predicted RBP	4.16	□□□□□ -1.74
TOM1L1-222	ENST00000575909	SBF1	O95248	1867 aa		4.15	□□□□□ -1.74
TOM1L1-222	ENST00000575909	IGLV11-55	A0A075B6I3	123 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TRGV10	A0A0A0MS01	117 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TRBV6-6	A0A0A6YYG2	114 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TRDV1	A0A1B0GX56	115 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	C7orf77	A4D0Y5	90 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	C5orf63	A6NC05	138 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909		J3QQQ9	107 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TAX1BP3	O14907	124 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	UQCRQ	O14949	82 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	APOM	O95445	188 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	NAPSA	O96009	420 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	PGA3	P0DJD8	388 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	ASIP	P42127	132 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	INPP1	P49441	399 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	MTPN	P58546	118 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	HERVK_113	P61574	105 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	HLA-DRB3	P79483	266 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909		Q0VG73	95 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	RSPO1	Q2MKA7	263 aa	Predicted RBP	4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	UNQ5815/PRO19632	Q6UWF5	114 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TMEM14EP	Q6UXP3	125 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms