RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 SLC24A4Q8NFF2 622 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 TXN2Q99757 166 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 ASCL2Q99929 193 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 RBKSQ9H477 322 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 DAZ1Q9NQZ3 744 aaKnown RBP6.48□□□□□ -1.37
SMG6-216ENST00000575176 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.48□□□□□ -1.37
SMG6-216ENST00000575176 TECRQ9NZ01 308 aaKnown RBP6.48□□□□□ -1.37
SMG6-216ENST00000575176 IGKV1D-37A0A075B6S9 117 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 C9orf170A2RU37 121 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 RBMY1BA6NDE4 496 aaKnown RBP6.47□□□□□ -1.37
SMG6-216ENST00000575176 RBMY1EA6NEQ0 496 aaKnown RBP6.47□□□□□ -1.37
SMG6-216ENST00000575176 NAP1L6A6NFF2 107 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 K7EMT4 169 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 CLN5O75503 358 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 ADAP1O75689 374 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 TMEM50AO95807 157 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 IFNA17P01571 189 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 APOHP02749 345 aaPredicted RBP6.47□□□□□ -1.37
SMG6-216ENST00000575176 RBMY1DP0C7P1 496 aaKnown RBP6.47□□□□□ -1.37
SMG6-216ENST00000575176 SLC25A6P12236 298 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 ANXA7P20073 488 aaKnown RBP6.47□□□□□ -1.37
SMG6-216ENST00000575176 MFAP4P55083 255 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 SRPXP78539 464 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 DEFB121Q5J5C9 76 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 ZNF57Q68EA5 555 aaPredicted RBP6.47□□□□□ -1.37
SMG6-216ENST00000575176 TOMM20LQ6UXN7 152 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 LGI3Q8N145 548 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 TMEM116Q8NCL8 245 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 OR4X1Q8NH49 305 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 MARC2Q969Z3 335 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 PINX1Q96BK5 328 aaKnown RBP6.47□□□□□ -1.37
SMG6-216ENST00000575176 SCGB3A2Q96PL1 93 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 C7orf50Q9BRJ6 194 aaKnown RBP6.47□□□□□ -1.37
SMG6-216ENST00000575176 VSIRQ9H7M9 311 aa6.47□□□□□ -1.37
SMG6-216ENST00000575176 MRPL27Q9P0M9 148 aaKnown RBP6.47□□□□□ -1.37
SMG6-216ENST00000575176 AGRNO00468 2067 aa6.46□□□□□ -1.37
SMG6-216ENST00000575176 IGKV1OR2-108A0A075B7D4 117 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 IGHV7-4-1A0A0J9YVY3 117 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 CORTO00230 105 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 CHEK1O14757 476 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 TSPAN4O14817 238 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 LYRM1O43325 122 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 ZNF207O43670 478 aaKnown RBP6.46□□□□□ -1.38
SMG6-216ENST00000575176 VAMP1P23763 118 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 NPY1RP25929 384 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 HTR2BP41595 481 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 CD81P60033 236 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 ERHP84090 104 aaKnown RBP6.46□□□□□ -1.38
SMG6-216ENST00000575176 FAM106AQ4KMX7 169 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 Q56UQ5 140 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 GGNBP1Q5YKI7 109 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 TRIQKQ629K1 86 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 UBAC2Q8NBM4 344 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 OR52B4Q8NGK2 314 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 OR4D5Q8NGN0 318 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 DTD1Q8TEA8 209 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 RNF2Q99496 336 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 NEURL2Q9BR09 285 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 CCDC32Q9BV29 185 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 C20orf85Q9H1P6 137 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 PTTG2Q9NZH5 202 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 SMPXQ9UHP9 88 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 UFC1Q9Y3C8 167 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 U3KQE9 123 aa6.46□□□□□ -1.38
SMG6-216ENST00000575176 TRAV25A0A0B4J276 109 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 LINC00854A0A1B0GVQ3 168 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 ZNF320A2RRD8 509 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 PMS2P5A8MQ11 134 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 FAM90A26D6RGX4 464 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 CYB5BO43169 146 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 OR4E1P0C645 316 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 NHLRC4P0CG21 123 aaPredicted RBP6.45□□□□□ -1.38
SMG6-216ENST00000575176 OPRK1P41145 380 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 RND2P52198 227 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 HAGHQ16775 308 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 TATDN3Q17R31 274 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 TIGITQ495A1 244 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 LYG2Q86SG7 212 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 DEFB125Q8N687 156 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 STPG3Q8N7X2 389 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 RNASE11Q8TAA1 199 aaKnown RBP6.45□□□□□ -1.38
SMG6-216ENST00000575176 RNASEH2CQ8TDP1 164 aaKnown RBP6.45□□□□□ -1.38
SMG6-216ENST00000575176 DYNLRB2Q8TF09 96 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 MITD1Q8WV92 249 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 ST8SIA2Q92186 375 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 C11orf1Q9H5F2 150 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 EDA2RQ9HAV5 297 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 PALMDQ9NP74 551 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 RCL1Q9Y2P8 373 aaKnown RBP6.45□□□□□ -1.38
SMG6-216ENST00000575176 KCNIP3Q9Y2W7 256 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 TMED3Q9Y3Q3 217 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 PUS1Q9Y606 427 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMG6-216ENST00000575176 U3KQK5 164 aa6.45□□□□□ -1.38
SMG6-216ENST00000575176 IGHV3-49A0A0A0MS15 119 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 CEBPZOSA8MTT3 80 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 NUPL2O15504 423 aaKnown RBP6.44□□□□□ -1.38
SMG6-216ENST00000575176 GNG7O60262 68 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 ANXA3P12429 323 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 CRYBB3P26998 211 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 SNCAP37840 140 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms