RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 OR11H1Q8NG94 326 aa13.19□□□□□ -0.3
NUP88-210ENST00000574867 RAX2Q96IS3 184 aa13.19□□□□□ -0.3
NUP88-210ENST00000574867 ANK2Q01484 3957 aa13.18□□□□□ -0.3
NUP88-210ENST00000574867 LINC01619G3V211 115 aa13.18□□□□□ -0.3
NUP88-210ENST00000574867 CCL24O00175 119 aa13.18□□□□□ -0.3
NUP88-210ENST00000574867 PF4P02776 101 aa13.18□□□□□ -0.3
NUP88-210ENST00000574867 GPX4P36969 197 aaPredicted RBP13.18□□□□□ -0.3
NUP88-210ENST00000574867 FGL1Q08830 312 aa13.18□□□□□ -0.3
NUP88-210ENST00000574867 PRSS54Q6PEW0 395 aa13.18□□□□□ -0.3
NUP88-210ENST00000574867 CLEC19AQ6UXS0 136 aa13.18□□□□□ -0.3
NUP88-210ENST00000574867 SLC16A13Q7RTY0 426 aa13.18□□□□□ -0.3
NUP88-210ENST00000574867 OR1N2Q8NGR9 330 aa13.18□□□□□ -0.3
NUP88-210ENST00000574867 CACNG8Q8WXS5 425 aa13.18□□□□□ -0.3
NUP88-210ENST00000574867 DPF1Q92782 380 aa13.18□□□□□ -0.3
NUP88-210ENST00000574867 BSCL2Q96G97 398 aaPredicted RBP13.18□□□□□ -0.3
NUP88-210ENST00000574867 IGHV4OR15-8A0A075B7B6 117 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 A0A087WW49 117 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 GPR183P32249 361 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 NPBWR1P48145 328 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 Q56UQ5 140 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 ACSM6Q6P461 480 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 OR5AC2Q9NZP5 309 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 PRSS46E5RG02 174 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 H0YIZ8 118 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 SCGB2A1O75556 95 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 ZP3P21754 424 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 ARL3P36405 182 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 P2RY1P47900 373 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 SPSB3Q6PJ21 355 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 UBAC2Q8NBM4 344 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 OR4X1Q8NH49 305 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 THAP6Q8TBB0 222 aa13.17□□□□□ -0.3
NUP88-210ENST00000574867 F8W735 103 aaPredicted RBP13.16□□□□□ -0.3
NUP88-210ENST00000574867 TSPAN15O95858 294 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 CLEC3BP05452 202 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 METTL15P1P0C7V9 234 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 STX12Q86Y82 276 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 TMEM116Q8NCL8 245 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 SLC35E1Q96K37 410 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 OR2T8A6NH00 312 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 PMS2P5A8MQ11 134 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 BMPR1BO00238 502 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 TGOLN2O43493 480 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 GNG7O60262 68 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 IGHV3-48P01763 117 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 OR8G2PQ6IF36 304 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 OR10P1Q8NGE3 313 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 DCUN1D4Q92564 292 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 DUX3Q96PT4 197 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 MBD2Q9UBB5 411 aa13.16□□□□□ -0.3
NUP88-210ENST00000574867 PPP5D1E7EU14 171 aa13.15□□□□□ -0.3
NUP88-210ENST00000574867 GGCTO75223 188 aaKnown RBP13.15□□□□□ -0.3
NUP88-210ENST00000574867 LYL1P12980 280 aa13.15□□□□□ -0.3
NUP88-210ENST00000574867 TMEM252Q8N6L7 170 aa13.15□□□□□ -0.3
NUP88-210ENST00000574867 OR2T35Q8NGX2 323 aa13.15□□□□□ -0.3
NUP88-210ENST00000574867 RNF126Q9BV68 326 aa13.15□□□□□ -0.3
NUP88-210ENST00000574867 SLC25A31Q9H0C2 315 aa13.15□□□□□ -0.3
NUP88-210ENST00000574867 TRAV14DV4A0A0A6YYC5 116 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 FAM24AA6NFZ4 105 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 NUPL2O15504 423 aaKnown RBP13.14□□□□□ -0.31
NUP88-210ENST00000574867 CLN5O75503 358 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 HOXD3P31249 432 aaPredicted RBP13.14□□□□□ -0.31
NUP88-210ENST00000574867 SULT1A1P50225 295 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 RND2P52198 227 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 MLANAQ16655 118 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 RPEL1Q2QD12 228 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 CHAC2Q8WUX2 184 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 TRAV30A0A087WSZ9 112 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 DLK1P80370 383 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 ACOT7LQ6ZUV0 252 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 GGACTQ9BVM4 153 aa13.14□□□□□ -0.31
NUP88-210ENST00000574867 MRPL36Q9P0J6 103 aaKnown RBP13.14□□□□□ -0.31
NUP88-210ENST00000574867 hCG_2014768A0A024R1R8 64 aa13.13□□□□□ -0.31
NUP88-210ENST00000574867 IGSF23A1L1A6 192 aa13.13□□□□□ -0.31
NUP88-210ENST00000574867 FNDC10F2Z333 226 aa13.13□□□□□ -0.31
NUP88-210ENST00000574867 HBG1P69891 147 aa13.13□□□□□ -0.31
NUP88-210ENST00000574867 HBG2P69892 147 aa13.13□□□□□ -0.31
NUP88-210ENST00000574867 BAXQ07812 192 aa13.13□□□□□ -0.31
NUP88-210ENST00000574867 GAMTQ14353 236 aa13.13□□□□□ -0.31
NUP88-210ENST00000574867 ACY3Q96HD9 319 aa13.13□□□□□ -0.31
NUP88-210ENST00000574867 CCNKO75909 580 aa13.12□□□□□ -0.31
NUP88-210ENST00000574867 CTSGP08311 255 aa13.12□□□□□ -0.31
NUP88-210ENST00000574867 LINC00482Q8N8I6 264 aa13.12□□□□□ -0.31
NUP88-210ENST00000574867 CST7O76096 145 aa13.12□□□□□ -0.31
NUP88-210ENST00000574867 SLURP1P55000 103 aa13.12□□□□□ -0.31
NUP88-210ENST00000574867 EWSR1Q01844 656 aaKnown RBP eCLIP13.12□□□□□ -0.31
NUP88-210ENST00000574867 RELQ04864 619 aaPredicted RBP13.12□□□□□ -0.31
NUP88-210ENST00000574867 SLC38A11Q08AI6 406 aa13.12□□□□□ -0.31
NUP88-210ENST00000574867 PRR31Q5SQ13 230 aa13.12□□□□□ -0.31
NUP88-210ENST00000574867 HAPLN4Q86UW8 402 aa13.12□□□□□ -0.31
NUP88-210ENST00000574867 NPIPB3Q92617 1050 aa13.12□□□□□ -0.31
NUP88-210ENST00000574867 CHRDL1Q9BU40 450 aa13.12□□□□□ -0.31
NUP88-210ENST00000574867 S100A11P31949 105 aa13.11□□□□□ -0.31
NUP88-210ENST00000574867 ADMP35318 185 aa13.11□□□□□ -0.31
NUP88-210ENST00000574867 C1QL4Q86Z23 238 aa13.11□□□□□ -0.31
NUP88-210ENST00000574867 OR1S2Q8NGQ3 325 aa13.11□□□□□ -0.31
NUP88-210ENST00000574867 ZC4H2Q9NQZ6 224 aa13.11□□□□□ -0.31
NUP88-210ENST00000574867 IGLC1P0CG04 106 aa13.11□□□□□ -0.31
NUP88-210ENST00000574867 OR10J1P30954 320 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms