RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 WT1-ASQ06250 92 aa8.43□□□□□ -1.06
USP43-205ENST00000574408 C16orf82Q7Z2V1 217 aa8.43□□□□□ -1.06
USP43-205ENST00000574408 TMEM144Q7Z5S9 345 aa8.43□□□□□ -1.06
USP43-205ENST00000574408 HIST1H2BLQ99880 126 aa8.43□□□□□ -1.06
USP43-205ENST00000574408 CGB1A6NKQ9 187 aa8.43□□□□□ -1.06
USP43-205ENST00000574408 FNDC10F2Z333 226 aa8.43□□□□□ -1.06
USP43-205ENST00000574408 C19orf84I3L1E1 186 aa8.43□□□□□ -1.06
USP43-205ENST00000574408 TGOLN2O43493 480 aa8.43□□□□□ -1.06
USP43-205ENST00000574408 ARL14EPLP0DKL9 152 aa8.43□□□□□ -1.06
USP43-205ENST00000574408 REC114Q7Z4M0 266 aa8.43□□□□□ -1.06
USP43-205ENST00000574408 LY6G5BQ8NDX9 201 aa8.43□□□□□ -1.06
USP43-205ENST00000574408 SSBP3Q9BWW4 388 aaPredicted RBP8.43□□□□□ -1.06
USP43-205ENST00000574408 AMMECR1Q9Y4X0 333 aaPredicted RBP8.43□□□□□ -1.06
USP43-205ENST00000574408 ACTL6BO94805 426 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 OR10J1P30954 320 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 CD69Q07108 199 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 SPATA31B1PQ5VZV4 182 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 HIST3H2BBQ8N257 126 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 ACY3Q96HD9 319 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 LOC105371242A0A075B767 164 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 IGKV1OR2-108A0A075B7D4 117 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 C11orf94C9JXX5 98 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 TMEM250H0YL14 139 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 EREGO14944 169 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 REG1AP05451 166 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 STAG3L2P0CL84 134 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 STAG3L3P0CL85 134 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 GATA2P23769 480 aaPredicted RBP8.42□□□□□ -1.06
USP43-205ENST00000574408 GPR6P46095 362 aaPredicted RBP8.42□□□□□ -1.06
USP43-205ENST00000574408 SDF2L1Q9HCN8 221 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 SEPSECSQ9HD40 501 aaKnown RBP8.42□□□□□ -1.06
USP43-205ENST00000574408 A0A087WWC5 75 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 A0A1W2PPI3 338 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 KRTDAPP60985 99 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 RHOBP62745 196 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 PRR20EP86478 221 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 PRR20CP86479 221 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 PRR20DP86480 221 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 PRR20BP86481 221 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 PRR20AP86496 221 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 PNRC1Q12796 327 aaPredicted RBP8.42□□□□□ -1.06
USP43-205ENST00000574408 TNXAQ16473 311 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 ETFRF1Q6IPR1 90 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 BAGE3Q86Y29 109 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 BAGE2Q86Y30 109 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 ZNF664Q8N3J9 261 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 OR2T6Q8NHC8 308 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 SLC35E1Q96K37 410 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 SLC45A2Q9UMX9 530 aa8.42□□□□□ -1.06
USP43-205ENST00000574408 INS-IGF2F8WCM5 200 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 APELAP0DMC3 54 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 NTF3P20783 257 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 OR5I1Q13606 314 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 MRGPRG-AS1Q2M3A8 158 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 MMD2Q8IY49 270 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 TEX45Q8NA69 505 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 PARLQ9H300 379 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 PRDM13Q9H4Q3 707 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 TACC2O95359 2948 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 H0Y8G0 127 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 IGHV3-48P01763 117 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 LINC00869P0C866 280 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 ATP5G3P48201 142 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 GNB1P62873 340 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 KLRD1Q13241 179 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 PSG5Q15238 335 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 OR4X1Q8NH49 305 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 BTF3L4Q96K17 158 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 MS4A10Q96PG2 267 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 SERTAD4Q9NUC0 356 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 A0A1W2PRD5 423 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 A0A1W2PRF3 423 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 A0A1W2PRM7 423 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 CXorf1O96002 111 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 RPL27AP46776 148 aaKnown RBP8.41□□□□□ -1.06
USP43-205ENST00000574408 SUB1P53999 127 aaKnown RBP eCLIP8.41□□□□□ -1.06
USP43-205ENST00000574408 TMEM249Q2WGJ8 235 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 LDLRAD2Q5SZI1 272 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 OR51G1Q8NGK1 321 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 VN1R17PQ8TDU5 208 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 NAT8Q9UHE5 227 aa8.41□□□□□ -1.06
USP43-205ENST00000574408 B4DEV8 164 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 FOLR2P14207 255 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 S100A7P31151 101 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 TMEM241Q24JQ0 296 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 HCP5Q6MZN7 132 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 CYP2G1PQ6ZSU1 146 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 CACNG8Q8WXS5 425 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 TBX15Q96SF7 602 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 IMMP2LQ96T52 175 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 FBXL15Q9H469 300 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 SIGLEC9Q9Y336 463 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 HILPDAQ9Y5L2 63 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 CFAP46Q8IYW2 2715 aa8.4□□□□□ -1.06
USP43-205ENST00000574408 TMEM8BA6NDV4 472 aa8.4□□□□□ -1.07
USP43-205ENST00000574408 TIMM23O14925 209 aa8.4□□□□□ -1.07
USP43-205ENST00000574408 TCF21O43680 179 aa8.4□□□□□ -1.07
USP43-205ENST00000574408 HTR1DP28221 377 aa8.4□□□□□ -1.07
USP43-205ENST00000574408 TAS2R60P59551 318 aa8.4□□□□□ -1.07
USP43-205ENST00000574408 DMRTA1Q5VZB9 504 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms