RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PRCDQ00LT1 54 aa8.53□□□□□ -1.04
CTNS-208ENST00000574218 TNP2Q05952 138 aa8.53□□□□□ -1.04
CTNS-208ENST00000574218 H2BFWTQ7Z2G1 175 aa8.53□□□□□ -1.04
CTNS-208ENST00000574218 OR5AP2Q8NGF4 316 aa8.53□□□□□ -1.04
CTNS-208ENST00000574218 RAB40CQ96S21 281 aa8.53□□□□□ -1.04
CTNS-208ENST00000574218 NIPSNAP3BQ9BS92 247 aa8.53□□□□□ -1.04
CTNS-208ENST00000574218 NDUFB11Q9NX14 153 aa8.53□□□□□ -1.04
CTNS-208ENST00000574218 EHFQ9NZC4 300 aa8.53□□□□□ -1.04
CTNS-208ENST00000574218 LRP1BQ9NZR2 4599 aa8.53□□□□□ -1.04
CTNS-208ENST00000574218 IGHV3OR16-12A0A075B7B8 117 aa8.52□□□□□ -1.05
CTNS-208ENST00000574218 SMIM9A6NGZ8 99 aa8.52□□□□□ -1.05
CTNS-208ENST00000574218 DBX1A6NMT0 343 aa8.52□□□□□ -1.05
CTNS-208ENST00000574218 CORTO00230 105 aa8.52□□□□□ -1.05
CTNS-208ENST00000574218 GNRHRP30968 328 aa8.52□□□□□ -1.05
CTNS-208ENST00000574218 AP2S1P53680 142 aaPredicted RBP8.52□□□□□ -1.05
CTNS-208ENST00000574218 FAM3BP58499 235 aaPredicted RBP8.52□□□□□ -1.05
CTNS-208ENST00000574218 C4orf48Q5BLP8 95 aa8.52□□□□□ -1.05
CTNS-208ENST00000574218 DCANP1Q8TF63 244 aa8.52□□□□□ -1.05
CTNS-208ENST00000574218 RRP15Q9Y3B9 282 aaKnown RBP8.52□□□□□ -1.05
CTNS-208ENST00000574218 RFNGQ9Y644 331 aa8.52□□□□□ -1.05
CTNS-208ENST00000574218 A0A1B0GU03 582 aa8.51□□□□□ -1.05
CTNS-208ENST00000574218 GPR31O00270 319 aa8.51□□□□□ -1.05
CTNS-208ENST00000574218 TMEM50AO95807 157 aa8.51□□□□□ -1.05
CTNS-208ENST00000574218 CRYBB3P26998 211 aa8.51□□□□□ -1.05
CTNS-208ENST00000574218 SUB1P53999 127 aaKnown RBP eCLIP8.51□□□□□ -1.05
CTNS-208ENST00000574218 HSPE1P61604 102 aaKnown RBP8.51□□□□□ -1.05
CTNS-208ENST00000574218 TBCEQ15813 527 aaPredicted RBP8.51□□□□□ -1.05
CTNS-208ENST00000574218 C6orf223Q8N319 242 aa8.51□□□□□ -1.05
CTNS-208ENST00000574218 SLC35G3Q8N808 338 aa8.51□□□□□ -1.05
CTNS-208ENST00000574218 NEU1Q99519 415 aa8.51□□□□□ -1.05
CTNS-208ENST00000574218 ZNF2Q9BSG1 426 aaPredicted RBP8.51□□□□□ -1.05
CTNS-208ENST00000574218 DIABLOQ9NR28 239 aa8.51□□□□□ -1.05
CTNS-208ENST00000574218 A0A0A6YYH2 397 aa8.5□□□□□ -1.05
CTNS-208ENST00000574218 MEIS3P1A6NDR6 274 aa8.5□□□□□ -1.05
CTNS-208ENST00000574218 A6NJ64 397 aa8.5□□□□□ -1.05
CTNS-208ENST00000574218 PPP5CP53041 499 aa8.5□□□□□ -1.05
CTNS-208ENST00000574218 FAM222AQ5U5X8 452 aa8.5□□□□□ -1.05
CTNS-208ENST00000574218 SFXN4Q6P4A7 337 aa8.5□□□□□ -1.05
CTNS-208ENST00000574218 C15orf53Q8NAA6 179 aa8.5□□□□□ -1.05
CTNS-208ENST00000574218 PDCD10Q9BUL8 212 aa8.5□□□□□ -1.05
CTNS-208ENST00000574218 BLOC1S6Q9UL45 172 aa8.5□□□□□ -1.05
CTNS-208ENST00000574218 EBAG9O00559 213 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 CLN5O75503 358 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 OPRK1P41145 380 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 SCAND1P57086 179 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 PHLDA2Q53GA4 152 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 SPINK9Q5DT21 86 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 TMEM88Q6PEY1 159 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 GSG1LQ6UXU4 331 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 OR5H2Q8NGV7 314 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 YTHDF1Q9BYJ9 559 aaKnown RBP8.49□□□□□ -1.05
CTNS-208ENST00000574218 AUNIPQ9H7T9 357 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 ENY2Q9NPA8 101 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 DKK2Q9UBU2 259 aa8.49□□□□□ -1.05
CTNS-208ENST00000574218 DMBT1Q9UGM3 2413 aaPredicted RBP8.49□□□□□ -1.05
CTNS-208ENST00000574218 TRAV30A0A087WSZ9 112 aa8.48□□□□□ -1.05
CTNS-208ENST00000574218 H3BMM0 161 aa8.48□□□□□ -1.05
CTNS-208ENST00000574218 HNRNPCP07910 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
CTNS-208ENST00000574218 HOXA1P49639 335 aaPredicted RBP8.48□□□□□ -1.05
CTNS-208ENST00000574218 TAS2R46P59540 309 aa8.48□□□□□ -1.05
CTNS-208ENST00000574218 DAD1P61803 113 aa8.48□□□□□ -1.05
CTNS-208ENST00000574218 OXA1LQ15070 435 aa8.48□□□□□ -1.05
CTNS-208ENST00000574218 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
CTNS-208ENST00000574218 ZNF705AQ6ZN79 300 aaPredicted RBP8.48□□□□□ -1.05
CTNS-208ENST00000574218 OR6F1Q8NGZ6 308 aa8.48□□□□□ -1.05
CTNS-208ENST00000574218 C7orf50Q9BRJ6 194 aaKnown RBP8.48□□□□□ -1.05
CTNS-208ENST00000574218 SEPSECSQ9HD40 501 aaKnown RBP8.48□□□□□ -1.05
CTNS-208ENST00000574218 FAM212BQ9NTI7 297 aaPredicted RBP8.48□□□□□ -1.05
CTNS-208ENST00000574218 GOLT1BQ9Y3E0 138 aa8.48□□□□□ -1.05
CTNS-208ENST00000574218 APOBP04114 4563 aaKnown RBP8.47□□□□□ -1.05
CTNS-208ENST00000574218 NBDYA0A0U1RRE5 68 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 ZNF705FA8MVS1 300 aaPredicted RBP8.47□□□□□ -1.05
CTNS-208ENST00000574218 FAM90A26D6RGX4 464 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 IGKV3-20P01619 116 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 HBE1P02100 147 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 PMP2P02689 132 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 ZNF705DP0CH99 300 aaPredicted RBP8.47□□□□□ -1.05
CTNS-208ENST00000574218 ZNF705BP0CI00 300 aaPredicted RBP8.47□□□□□ -1.05
CTNS-208ENST00000574218 HLA-DRB4P13762 266 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 RFX2P48378 723 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 FXYD7P58549 80 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 IDNKQ5T6J7 187 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 LPCAT3Q6P1A2 487 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 C16orf54Q6UWD8 224 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 DHRS11Q6UWP2 260 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 SPATA12Q7Z6I5 190 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 Q8WTZ3 238 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 MRGPRFQ96AM1 343 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 SEC22AQ96IW7 307 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 FXYD6Q9H0Q3 95 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 NRN1Q9NPD7 142 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 TXNL4BQ9NX01 149 aaKnown RBP8.47□□□□□ -1.05
CTNS-208ENST00000574218 SSR3Q9UNL2 185 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 HLA-DRB4X5D2U9 266 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 HERC1Q15751 4861 aa8.47□□□□□ -1.05
CTNS-208ENST00000574218 LOC102723971A0A1B0GUV8 181 aa8.46□□□□□ -1.06
CTNS-208ENST00000574218 RPS10-NUDT3A0A1W2PQS6 291 aa8.46□□□□□ -1.06
CTNS-208ENST00000574218 GSTZ1O43708 216 aaPredicted RBP8.46□□□□□ -1.06
CTNS-208ENST00000574218 AQP4P55087 323 aa8.46□□□□□ -1.06
CTNS-208ENST00000574218 TSPAN5P62079 268 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms