RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 CD109Q6YHK3 1445 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 TRAV7A0A075B6U4 112 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 IGKV1-9A0A0C4DH69 117 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 A0A1W2PNM2 257 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 ARL5CA6NH57 179 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 TMEM212A6NML5 194 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 G3V3Q6 166 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 C19orf84I3L1E1 186 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 TAX1BP3O14907 124 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 RTL8CO15255 209 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 ARPC5O15511 151 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 GGCTO75223 188 aaKnown RBP1.17□□□□□ -2.22
CHD3-217ENST00000574022 FAM107AO95990 144 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 TRGC2P03986 189 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 IGKV1-16P04430 117 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 HMGN1P05114 100 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 KRTAP10-9P60411 292 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 UBE2BP63146 152 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 EIF5AP63241 154 aaKnown RBP1.17□□□□□ -2.22
CHD3-217ENST00000574022 SUPT4H1P63272 117 aaKnown RBP1.17□□□□□ -2.22
CHD3-217ENST00000574022 FOXF1Q12946 379 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 KISS1Q15726 138 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 KHDC3LQ587J8 217 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 PABPC1L2AQ5JQF8 200 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 FKBP1CQ5VVH2 108 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 IGFL1Q6UW32 110 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 LYZL1Q6UWQ5 148 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 TCF24Q7RTU0 167 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 ANGPTL5Q86XS5 388 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 DYNAPQ8N1N2 210 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 RPP25LQ8N5L8 163 aaKnown RBP1.17□□□□□ -2.22
CHD3-217ENST00000574022 SIGLECL1Q8N7X8 197 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 OR52R1Q8NGF1 315 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 OR4C16Q8NGL9 310 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 OR8D4Q8NGM9 314 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 OR5J2Q8NH18 312 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 PFN4Q8NHR9 129 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 THEM6Q8WUY1 208 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 C11orf40Q8WZ69 217 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 SLAMF6Q96DU3 332 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 HIST1H2BLQ99880 126 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 ZNF471Q9BX82 626 aaPredicted RBP1.17□□□□□ -2.22
CHD3-217ENST00000574022 FAM107BQ9H098 131 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 TMEM133Q9H2Q1 129 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 GSKIPQ9P0R6 139 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 OR52A1Q9UKL2 312 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 HHLA3Q9XRX5 114 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 VIRMAQ69YN4 1812 aaKnown RBP1.17□□□□□ -2.22
CHD3-217ENST00000574022 DENND4CQ5VZ89 1909 aa1.17□□□□□ -2.22
CHD3-217ENST00000574022 RIC1Q4ADV7 1423 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 KDM5BQ9UGL1 1544 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 IGKV2-24A0A0C4DH68 120 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 A0A0D9SEW6 157 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 TRDV1A0A1B0GX56 115 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 TLCD2A6NGC4 264 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 H7C2G1 150 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 J3KT08 172 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 TMEM256-PLSCR3K7ERE1 68 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 KPNA4O00629 521 aaPredicted RBP1.16□□□□□ -2.22
CHD3-217ENST00000574022 TCL1BO95988 128 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 IGLV6-57P01721 117 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 OR10J4P0C629 311 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 DEFA4P12838 97 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 NFYBP25208 207 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 HINT1P49773 126 aaPredicted RBP1.16□□□□□ -2.22
CHD3-217ENST00000574022 INSL3P51460 131 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 POLR2HP52434 150 aaKnown RBP1.16□□□□□ -2.22
CHD3-217ENST00000574022 GTF2A1P52655 376 aaPredicted RBP1.16□□□□□ -2.22
CHD3-217ENST00000574022 IGFBP7Q16270 282 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 RTL8BQ17RB0 113 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 FAM27BQ5VT28 67 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 AGTRAPQ6RW13 159 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 DPPA3Q6W0C5 159 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 DHFR2Q86XF0 187 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 TMEM86AQ8N2M4 240 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 OR9Q1Q8NGQ5 310 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 PPTC7Q8NI37 304 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 STAG3L4Q8TBR4 150 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 WFDC5Q8TCV5 224 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 DCANP1Q8TF63 244 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 BORCS5Q969J3 196 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 TMEM106AQ96A25 262 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 ADAT3Q96EY9 351 aaPredicted RBP1.16□□□□□ -2.22
CHD3-217ENST00000574022 CCDC115Q96NT0 180 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 YPEL2Q96QA6 119 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 GPX7Q96SL4 187 aaPredicted RBP1.16□□□□□ -2.22
CHD3-217ENST00000574022 HSPB9Q9BQS6 159 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 DOHHQ9BU89 302 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 RTL8AQ9BWD3 113 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 LAMTOR2Q9Y2Q5 125 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 NUBP2Q9Y5Y2 271 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 ARAP1Q96P48 1450 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 PEG3Q9GZU2 1588 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 PIK3C2AO00443 1686 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 CCDC88AQ3V6T2 1871 aa1.16□□□□□ -2.22
CHD3-217ENST00000574022 ARID1AO14497 2285 aa1.15□□□□□ -2.22
CHD3-217ENST00000574022 MYH7BA7E2Y1 1941 aa1.15□□□□□ -2.22
CHD3-217ENST00000574022 TRGV10A0A0A0MS01 117 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 TRBV10-2A0A0K0K1G8 114 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 MEIS3P1A6NDR6 274 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms