RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 H1FXQ92522 213 aaKnown RBP13.08□□□□□ -0.32
USP43-204ENST00000573955 RSG1Q9BU20 258 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.08□□□□□ -0.32
USP43-204ENST00000573955 PXMP4Q9Y6I8 212 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 ARFGEF3Q5TH69 2177 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 PPIAL4EA0A075B759 164 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 TRAV26-1A0A087WT03 109 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 SAA2-SAA4A0A096LPE2 208 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 PPIAL4DF5H284 164 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 FCN3O75636 299 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 MT-CO2P00403 227 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 SAA2P0DJI9 122 aaPredicted RBP13.08□□□□□ -0.32
USP43-204ENST00000573955 PPIAL4FP0DN26 164 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 RPL15P61313 204 aaKnown RBP13.08□□□□□ -0.32
USP43-204ENST00000573955 LCN2P80188 198 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 CYP2G1PQ6ZSU1 146 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 TMEM144Q7Z5S9 345 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 ANAPC16Q96DE5 110 aa13.08□□□□□ -0.32
USP43-204ENST00000573955 HCFC1P51610 2035 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 TRAV38-1A0A0B4J264 116 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 GRIFINA4D1Z8 144 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 TMEM178BH3BS89 294 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 OR9G9P0C7N8 305 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 CCL3L1P16619 93 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 FFAR4Q5NUL3 377 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 GNPNAT1Q96EK6 184 aaPredicted RBP13.07□□□□□ -0.32
USP43-204ENST00000573955 QTRT1Q9BXR0 403 aaKnown RBP13.07□□□□□ -0.32
USP43-204ENST00000573955 CRYBG3Q68DQ2 2970 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 LYNX1G3V0Z9 82 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 IFNA5P01569 189 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 LYNX1P0DP58 116 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 UQCRFS1P47985 274 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 RAB9AP51151 201 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 ADORA2A-AS1P86434 159 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 PRORYQ9H606 182 aa13.07□□□□□ -0.32
USP43-204ENST00000573955 CEBPZOSA8MTT3 80 aa13.06□□□□□ -0.32
USP43-204ENST00000573955 ESDP10768 282 aa13.06□□□□□ -0.32
USP43-204ENST00000573955 RPL31P62899 125 aaKnown RBP13.06□□□□□ -0.32
USP43-204ENST00000573955 FER1L6-AS1Q8NA97 138 aa13.06□□□□□ -0.32
USP43-204ENST00000573955 S1PR3Q99500 378 aa13.06□□□□□ -0.32
USP43-204ENST00000573955 IDI2-AS1Q9NZ38 188 aa13.06□□□□□ -0.32
USP43-204ENST00000573955 FBXL7Q9UJT9 491 aa13.06□□□□□ -0.32
USP43-204ENST00000573955 OR2T8A6NH00 312 aa13.06□□□□□ -0.32
USP43-204ENST00000573955 RAB29O14966 203 aa13.06□□□□□ -0.32
USP43-204ENST00000573955 RPL23P62829 140 aaKnown RBP13.06□□□□□ -0.32
USP43-204ENST00000573955 OR4C12Q96R67 309 aa13.06□□□□□ -0.32
USP43-204ENST00000573955 TRAV1-1A0A0B4J248 108 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 A0A0U1RQK1 487 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 UBE2L5PA0A1B0GUS4 154 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 TAX1BP3O14907 124 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 SERF1AO75920 110 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 IL3RAP26951 378 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 CEACAM3P40198 252 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 ZNF525Q8N782 197 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 SIGLECL1Q8N7X8 197 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 Q8N976 141 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 TRAV3A0A0B4J244 114 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 PLA2G5P39877 138 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 SSX8Q7RTT4 187 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 SCGB1C1Q8TD33 95 aa13.05□□□□□ -0.32
USP43-204ENST00000573955 hADV38S2A0JD32 116 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 HBG1P69891 147 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 HBG2P69892 147 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 SLC38A11Q08AI6 406 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 PPIAL4CA0A0B4J2A2 164 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 ADMP35318 185 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 ZNF787Q6DD87 383 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 ZNF479Q96JC4 524 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 MS4A5Q9H3V2 200 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 VSIRQ9H7M9 311 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 CTSZQ9UBR2 303 aa13.04□□□□□ -0.32
USP43-204ENST00000573955 MUC15Q8N387 334 aa13.03□□□□□ -0.32
USP43-204ENST00000573955 FAM103A1Q9BTL3 118 aaKnown RBP13.03□□□□□ -0.32
USP43-204ENST00000573955 TP53TG3Q9ULZ0 132 aa13.03□□□□□ -0.32
USP43-204ENST00000573955 USP9XQ93008 2570 aaPredicted RBP13.03□□□□□ -0.32
USP43-204ENST00000573955 ERVK-16P61578 105 aa13.03□□□□□ -0.32
USP43-204ENST00000573955 OR4A16Q8NH70 328 aa13.03□□□□□ -0.32
USP43-204ENST00000573955 RAB9BQ9NP90 201 aa13.03□□□□□ -0.32
USP43-204ENST00000573955 CENPEQ02224 2701 aa13.03□□□□□ -0.32
USP43-204ENST00000573955 ZNF462Q96JM2 2506 aa13.02□□□□□ -0.32
USP43-204ENST00000573955 KBTBD11O94819 623 aa13.02□□□□□ -0.32
USP43-204ENST00000573955 AZU1P20160 251 aa13.02□□□□□ -0.32
USP43-204ENST00000573955 LINC00310P59036 64 aa13.02□□□□□ -0.32
USP43-204ENST00000573955 FAM78BQ5VT40 261 aa13.02□□□□□ -0.32
USP43-204ENST00000573955 TMEM200BQ69YZ2 307 aa13.02□□□□□ -0.32
USP43-204ENST00000573955 TMEM14EPQ6UXP3 125 aa13.02□□□□□ -0.32
USP43-204ENST00000573955 ZNF439Q8NDP4 499 aa13.02□□□□□ -0.32
USP43-204ENST00000573955 UHRF2Q96PU4 802 aa13.02□□□□□ -0.32
USP43-204ENST00000573955 RPUSD1Q9UJJ7 312 aaKnown RBP13.02□□□□□ -0.32
USP43-204ENST00000573955 LINC00312Q9Y6C7 94 aa13.02□□□□□ -0.32
USP43-204ENST00000573955 NDUFB3O43676 98 aa13.02□□□□□ -0.33
USP43-204ENST00000573955 BAGE3Q86Y29 109 aa13.02□□□□□ -0.33
USP43-204ENST00000573955 BAGE2Q86Y30 109 aa13.02□□□□□ -0.33
USP43-204ENST00000573955 TMEM140Q9NV12 185 aa13.02□□□□□ -0.33
USP43-204ENST00000573955 CRISP2P16562 243 aa13.01□□□□□ -0.33
USP43-204ENST00000573955 CKS1BP61024 79 aa13.01□□□□□ -0.33
USP43-204ENST00000573955 OR1B1Q8NGR6 318 aa13.01□□□□□ -0.33
USP43-204ENST00000573955 DDB2Q92466 427 aa13.01□□□□□ -0.33
USP43-204ENST00000573955 ZNF714Q96N38 554 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms