RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 LGALS9O00182 355 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 CCSO14618 274 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 TGOLN2O43493 480 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 SAP30O75446 220 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 SCGB2A1O75556 95 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 OR2C1O95371 312 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 IFNA10P01566 189 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 NPY1RP25929 384 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 GPR183P32249 361 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 ETFRF1Q6IPR1 90 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 OR9G4Q8NGQ1 327 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 MED28Q9H204 178 aa8.44□□□□□ -1.06
CHD3-216ENST00000573936 TENM3Q9P273 2699 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 OR2T8A6NH00 312 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 MPTX1A8MV57 137 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 GOSR2O14653 212 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 NUPL2O15504 423 aaKnown RBP8.43□□□□□ -1.06
CHD3-216ENST00000573936 SYNGR2O43760 224 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 GNG7O60262 68 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 SIX6O95475 246 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 OPRK1P41145 380 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 NKX2-1P43699 371 aaPredicted RBP8.43□□□□□ -1.06
CHD3-216ENST00000573936 RRAS2P62070 204 aaPredicted RBP8.43□□□□□ -1.06
CHD3-216ENST00000573936 RELQ04864 619 aaPredicted RBP8.43□□□□□ -1.06
CHD3-216ENST00000573936 EGFEM1PQ0D2K5 195 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 FCN2Q15485 313 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 IAH1Q2TAA2 248 aaPredicted RBP8.43□□□□□ -1.06
CHD3-216ENST00000573936 UBAC2Q8NBM4 344 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 SIGLEC8Q9NYZ4 499 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 MGAT4CQ9UBM8 478 aa8.43□□□□□ -1.06
CHD3-216ENST00000573936 WRBO00258 174 aa8.42□□□□□ -1.06
CHD3-216ENST00000573936 SLC25A4P12235 298 aa8.42□□□□□ -1.06
CHD3-216ENST00000573936 CXCL3P19876 107 aa8.42□□□□□ -1.06
CHD3-216ENST00000573936 RAB11AP62491 216 aa8.42□□□□□ -1.06
CHD3-216ENST00000573936 ID3Q02535 119 aa8.42□□□□□ -1.06
CHD3-216ENST00000573936 ZBTB8BQ8NAP8 495 aaPredicted RBP8.42□□□□□ -1.06
CHD3-216ENST00000573936 OR11H7Q8NGC8 314 aa8.42□□□□□ -1.06
CHD3-216ENST00000573936 OR4D5Q8NGN0 318 aa8.42□□□□□ -1.06
CHD3-216ENST00000573936 OR10C1Q96KK4 312 aa8.42□□□□□ -1.06
CHD3-216ENST00000573936 ZNF436Q9C0F3 470 aaPredicted RBP8.42□□□□□ -1.06
CHD3-216ENST00000573936 UFC1Q9Y3C8 167 aa8.42□□□□□ -1.06
CHD3-216ENST00000573936 TRAV30A0A087WSZ9 112 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 ZNF320A2RRD8 509 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 C5orf51A6NDU8 294 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 FAM25EA8MYX2 175 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
CHD3-216ENST00000573936 NDUFA4O00483 81 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 IFNA4P05014 189 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 CSN3P07498 182 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 IAPPP10997 89 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 BCAP31P51572 246 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 ELLP55199 621 aaPredicted RBP8.41□□□□□ -1.06
CHD3-216ENST00000573936 H2BFSP57053 126 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 GSG1LQ6UXU4 331 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 OR4X1Q8NH49 305 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 ZC4H2Q9NQZ6 224 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 AURKAIP1Q9NWT8 199 aaPredicted RBP8.41□□□□□ -1.06
CHD3-216ENST00000573936 GSKIPQ9P0R6 139 aa8.41□□□□□ -1.06
CHD3-216ENST00000573936 RYR3Q15413 4870 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 CLN5O75503 358 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 TMEM50AO95807 157 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 SCGB1D2O95969 90 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 IGHV3-48P01763 117 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 CTSGP08311 255 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 GPX4P36969 197 aaPredicted RBP8.4□□□□□ -1.06
CHD3-216ENST00000573936 POLR2GP62487 172 aaKnown RBP eCLIP8.4□□□□□ -1.06
CHD3-216ENST00000573936 DEFB121Q5J5C9 76 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 IL34Q6ZMJ4 242 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 TMEM116Q8NCL8 245 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 OR2K2Q8NGT1 345 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 CHAC2Q8WUX2 184 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 MARC2Q969Z3 335 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 WDR89Q96FK6 387 aaPredicted RBP8.4□□□□□ -1.06
CHD3-216ENST00000573936 C2orf50Q96LR7 162 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 CHRDL1Q9BU40 450 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 MAGT1Q9H0U3 335 aa8.4□□□□□ -1.06
CHD3-216ENST00000573936 FNDC4Q9H6D8 234 aaPredicted RBP8.4□□□□□ -1.06
CHD3-216ENST00000573936 STRAPQ9Y3F4 350 aaKnown RBP8.4□□□□□ -1.06
CHD3-216ENST00000573936 C2orf70A6NJV1 201 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 A8MWP6 167 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 IGLV1-51P01701 117 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 ADMP35318 185 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 TAS2R30P59541 319 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 KRTAP10-11P60412 298 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 CD69Q07108 199 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 IL15RAQ13261 267 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 MLANAQ16655 118 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 SPANXN5Q5MJ07 72 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 ZNF600Q6ZNG1 722 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 DYNLRB2Q8TF09 96 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 TMEM170AQ8WVE7 144 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 CACNG8Q8WXS5 425 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 SMIM8Q96KF7 97 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 RAB40CQ96S21 281 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 TECRQ9NZ01 308 aaKnown RBP8.39□□□□□ -1.07
CHD3-216ENST00000573936 PSENENQ9NZ42 101 aa8.39□□□□□ -1.07
CHD3-216ENST00000573936 MRPL27Q9P0M9 148 aaKnown RBP8.39□□□□□ -1.07
CHD3-216ENST00000573936 PAIP2BQ9ULR5 123 aaKnown RBP8.39□□□□□ -1.07
CHD3-216ENST00000573936 IGHV3-35A0A0C4DH35 117 aa8.38□□□□□ -1.07
CHD3-216ENST00000573936 C15orf62A8K5M9 175 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms