RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 HTR2BP41595 481 aa20.86■□□□□ 0.93
SCARF1-207ENST00000573867 GUCA2BQ16661 112 aa20.86■□□□□ 0.93
SCARF1-207ENST00000573867 DAZ1Q9NQZ3 744 aaKnown RBP20.86■□□□□ 0.93
SCARF1-207ENST00000573867 DUXBA0A1W2PPF3 345 aa20.85■□□□□ 0.93
SCARF1-207ENST00000573867 A8MZ25 164 aa20.85■□□□□ 0.93
SCARF1-207ENST00000573867 CORTO00230 105 aa20.85■□□□□ 0.93
SCARF1-207ENST00000573867 PITX3O75364 302 aa20.85■□□□□ 0.93
SCARF1-207ENST00000573867 C2orf83Q53S99 150 aa20.85■□□□□ 0.93
SCARF1-207ENST00000573867 GTSCR1Q86UQ5 136 aa20.85■□□□□ 0.93
SCARF1-207ENST00000573867 DUSP18Q8NEJ0 188 aa20.85■□□□□ 0.93
SCARF1-207ENST00000573867 SLC24A4Q8NFF2 622 aa20.85■□□□□ 0.93
SCARF1-207ENST00000573867 C7orf50Q9BRJ6 194 aaKnown RBP20.85■□□□□ 0.93
SCARF1-207ENST00000573867 RBKSQ9H477 322 aa20.85■□□□□ 0.93
SCARF1-207ENST00000573867 A0A1B0GU03 582 aa20.84■□□□□ 0.93
SCARF1-207ENST00000573867 TMEM50AO95807 157 aa20.84■□□□□ 0.93
SCARF1-207ENST00000573867 NHLRC4P0CG21 123 aaPredicted RBP20.84■□□□□ 0.93
SCARF1-207ENST00000573867 OPRK1P41145 380 aa20.84■□□□□ 0.93
SCARF1-207ENST00000573867 CD81P60033 236 aa20.84■□□□□ 0.93
SCARF1-207ENST00000573867 RELQ04864 619 aaPredicted RBP20.84■□□□□ 0.93
SCARF1-207ENST00000573867 WFDC10AQ9H1F0 79 aa20.84■□□□□ 0.93
SCARF1-207ENST00000573867 C9orf170A2RU37 121 aa20.83■□□□□ 0.93
SCARF1-207ENST00000573867 C15orf62A8K5M9 175 aa20.83■□□□□ 0.93
SCARF1-207ENST00000573867 K7EMT4 169 aa20.83■□□□□ 0.93
SCARF1-207ENST00000573867 SCAF4O95104 1147 aaKnown RBP20.83■□□□□ 0.93
SCARF1-207ENST00000573867 NPBWR1P48145 328 aa20.83■□□□□ 0.93
SCARF1-207ENST00000573867 UBE2MP61081 183 aaKnown RBP20.83■□□□□ 0.93
SCARF1-207ENST00000573867 OR10C1Q96KK4 312 aa20.83■□□□□ 0.93
SCARF1-207ENST00000573867 NEURL2Q9BR09 285 aa20.83■□□□□ 0.93
SCARF1-207ENST00000573867 ANXA7P20073 488 aaKnown RBP20.82■□□□□ 0.92
SCARF1-207ENST00000573867 OR1S1Q8NH92 325 aa20.82■□□□□ 0.92
SCARF1-207ENST00000573867 DTD1Q8TEA8 209 aa20.82■□□□□ 0.92
SCARF1-207ENST00000573867 CENPXA8MT69 81 aa20.81■□□□□ 0.92
SCARF1-207ENST00000573867 YIF1AO95070 293 aa20.81■□□□□ 0.92
SCARF1-207ENST00000573867 HOXB5P09067 269 aa20.81■□□□□ 0.92
SCARF1-207ENST00000573867 NPY1RP25929 384 aa20.81■□□□□ 0.92
SCARF1-207ENST00000573867 TOMM20LQ6UXN7 152 aa20.81■□□□□ 0.92
SCARF1-207ENST00000573867 OR4X1Q8NH49 305 aa20.81■□□□□ 0.92
SCARF1-207ENST00000573867 CACFD1Q9UGQ2 172 aa20.81■□□□□ 0.92
SCARF1-207ENST00000573867 CLN5O75503 358 aa20.8■□□□□ 0.92
SCARF1-207ENST00000573867 RNASEH2CQ8TDP1 164 aaKnown RBP20.8■□□□□ 0.92
SCARF1-207ENST00000573867 HIPK2Q9H2X6 1198 aa20.8■□□□□ 0.92
SCARF1-207ENST00000573867 ZFAND3Q9H8U3 227 aa20.8■□□□□ 0.92
SCARF1-207ENST00000573867 SMPXQ9UHP9 88 aa20.8■□□□□ 0.92
SCARF1-207ENST00000573867 TMED3Q9Y3Q3 217 aa20.8■□□□□ 0.92
SCARF1-207ENST00000573867 IGHV3-49A0A0A0MS15 119 aa20.79■□□□□ 0.92
SCARF1-207ENST00000573867 LYRM1O43325 122 aa20.79■□□□□ 0.92
SCARF1-207ENST00000573867 OR4E1P0C645 316 aa20.79■□□□□ 0.92
SCARF1-207ENST00000573867 SLC25A6P12236 298 aa20.79■□□□□ 0.92
SCARF1-207ENST00000573867 DHRS2Q13268 280 aa20.79■□□□□ 0.92
SCARF1-207ENST00000573867 GGNBP1Q5YKI7 109 aa20.79■□□□□ 0.92
SCARF1-207ENST00000573867 PRSS54Q6PEW0 395 aa20.79■□□□□ 0.92
SCARF1-207ENST00000573867 LINC00299Q6ZSB3 139 aa20.79■□□□□ 0.92
SCARF1-207ENST00000573867 DEFB125Q8N687 156 aa20.79■□□□□ 0.92
SCARF1-207ENST00000573867 U3KQK5 164 aa20.79■□□□□ 0.92
SCARF1-207ENST00000573867 TRAV25A0A0B4J276 109 aa20.78■□□□□ 0.92
SCARF1-207ENST00000573867 PIGBOS1A0A0B4J2F0 54 aa20.78■□□□□ 0.92
SCARF1-207ENST00000573867 IGHV7-4-1A0A0J9YVY3 117 aa20.78■□□□□ 0.92
SCARF1-207ENST00000573867 ADAP1O75689 374 aa20.78■□□□□ 0.92
SCARF1-207ENST00000573867 ZNF600Q6ZNG1 722 aa20.78■□□□□ 0.92
SCARF1-207ENST00000573867 CCDC32Q9BV29 185 aa20.78■□□□□ 0.92
SCARF1-207ENST00000573867 PUS1Q9Y606 427 aaKnown RBP eCLIP20.78■□□□□ 0.92
SCARF1-207ENST00000573867 IGKV1-17P01599 117 aa20.77■□□□□ 0.92
SCARF1-207ENST00000573867 LYG2Q86SG7 212 aa20.77■□□□□ 0.92
SCARF1-207ENST00000573867 RPS10-NUDT3A0A1W2PQS6 291 aa20.76■□□□□ 0.91
SCARF1-207ENST00000573867 MPTX1A8MV57 137 aa20.76■□□□□ 0.91
SCARF1-207ENST00000573867 CHEK1O14757 476 aa20.76■□□□□ 0.91
SCARF1-207ENST00000573867 IFNA10P01566 189 aa20.76■□□□□ 0.91
SCARF1-207ENST00000573867 RND2P52198 227 aa20.76■□□□□ 0.91
SCARF1-207ENST00000573867 TIGITQ495A1 244 aa20.76■□□□□ 0.91
SCARF1-207ENST00000573867 RBPMS2Q6ZRY4 209 aaKnown RBP20.76■□□□□ 0.91
SCARF1-207ENST00000573867 RHPN1-AS1Q9BWJ2 59 aa20.76■□□□□ 0.91
SCARF1-207ENST00000573867 C20orf85Q9H1P6 137 aa20.76■□□□□ 0.91
SCARF1-207ENST00000573867 U3KQ87 197 aa20.76■□□□□ 0.91
SCARF1-207ENST00000573867 TENM3Q9P273 2699 aa20.75■□□□□ 0.91
SCARF1-207ENST00000573867 IGHV3OR16-13A0A075B7E8 117 aa20.75■□□□□ 0.91
SCARF1-207ENST00000573867 IGHV3-74A0A0B4J1X5 117 aa20.75■□□□□ 0.91
SCARF1-207ENST00000573867 OR11H12B2RN74 326 aa20.75■□□□□ 0.91
SCARF1-207ENST00000573867 APOHP02749 345 aaPredicted RBP20.75■□□□□ 0.91
SCARF1-207ENST00000573867 IAPPP10997 89 aa20.75■□□□□ 0.91
SCARF1-207ENST00000573867 LINC00322Q6ZN03 302 aaPredicted RBP20.75■□□□□ 0.91
SCARF1-207ENST00000573867 TMEM116Q8NCL8 245 aa20.75■□□□□ 0.91
SCARF1-207ENST00000573867 OR52B4Q8NGK2 314 aa20.75■□□□□ 0.91
SCARF1-207ENST00000573867 RNF2Q99496 336 aa20.75■□□□□ 0.91
SCARF1-207ENST00000573867 TUBA4BQ9H853 241 aa20.75■□□□□ 0.91
SCARF1-207ENST00000573867 TSPAN4O14817 238 aa20.74■□□□□ 0.91
SCARF1-207ENST00000573867 IGLC1P0CG04 106 aa20.74■□□□□ 0.91
SCARF1-207ENST00000573867 TM2D3Q9BRN9 247 aa20.74■□□□□ 0.91
SCARF1-207ENST00000573867 MAGT1Q9H0U3 335 aa20.74■□□□□ 0.91
SCARF1-207ENST00000573867 PTTG2Q9NZH5 202 aa20.74■□□□□ 0.91
SCARF1-207ENST00000573867 STAB2Q8WWQ8 2551 aa20.73■□□□□ 0.91
SCARF1-207ENST00000573867 TRAV14DV4A0A0A6YYC5 116 aa20.73■□□□□ 0.91
SCARF1-207ENST00000573867 RBMY1BA6NDE4 496 aaKnown RBP20.73■□□□□ 0.91
SCARF1-207ENST00000573867 RBMY1EA6NEQ0 496 aaKnown RBP20.73■□□□□ 0.91
SCARF1-207ENST00000573867 FAM90A26D6RGX4 464 aa20.73■□□□□ 0.91
SCARF1-207ENST00000573867 RBMY1DP0C7P1 496 aaKnown RBP20.73■□□□□ 0.91
SCARF1-207ENST00000573867 SLC25A4P12235 298 aa20.73■□□□□ 0.91
SCARF1-207ENST00000573867 HAGHQ16775 308 aa20.73■□□□□ 0.91
SCARF1-207ENST00000573867 C4orf46Q504U0 113 aa20.73■□□□□ 0.91
SCARF1-207ENST00000573867 SPAG8Q99932 426 aaPredicted RBP20.73■□□□□ 0.91
SCARF1-207ENST00000573867 TBC1D24Q9ULP9 559 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms