RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 TUBGCP6Q96RT7 1819 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 TAL2Q16559 108 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 DPM3Q9P2X0 92 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 A0A096LPF7 62 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 LOC101059948A0A1B0GTJ6 334 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 A0A1W2PPI3 338 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 C9orf153Q5TBE3 101 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 KLK8O60259 260 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 TFF3Q07654 80 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 SRXN1Q9BYN0 137 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 ZNF98A6NK75 572 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 PCNX1Q96RV3 2341 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 SRSF1Q07955 248 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 HOGA1Q86XE5 327 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 TSC2P49815 1807 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 A6NNC1 897 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 OR5P3Q8WZ94 311 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 FOCADQ5VW36 1801 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 TRAV12-2A0A075B6T6 113 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 PFN2P35080 140 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 MED12LQ86YW9 2145 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 A0A1W2PQD3 144 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 FAM57AQ8TBR7 257 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 LINC00477Q96M19 166 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 PEBP1P30086 187 aaKnown RBP13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 CXCL10P02778 98 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 SSBP2P81877 361 aaPredicted RBP13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 TIMM17AQ99595 171 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 RGPD4Q7Z3J3 1758 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 F5H768 121 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 IGKCP01834 107 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 TMEM91Q6ZNR0 172 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 TJP1Q07157 1748 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 ANK1P16157 1881 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 PLXNB2O15031 1838 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 ORMDL2Q53FV1 153 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 PLXND1Q9Y4D7 1925 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 TIMM23BQ5SRD1 257 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 SMRP1Q8NCR6 262 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 KLHL30-AS1Q8NEE0 82 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 C5orf30Q96GV9 206 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 C14orf132Q9NPU4 83 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 NRXN3Q9Y4C0 1643 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 ITGBL1O95965 494 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 C9orf62Q8N4C0 152 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 ZIC1Q15915 447 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 ZIC4Q8N9L1 334 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 DKK4Q9UBT3 224 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 DMKNQ6E0U4 476 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 LINC00299Q6ZSB3 139 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 NEU4Q8WWR8 484 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 SPXQ9BT56 116 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 EGR2P11161 476 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 UCP3P55916 312 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 ZNF876PQ49A33 203 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 GAS1P54826 345 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 RND3P61587 244 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 NDPQ00604 133 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 J3QW42 95 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 MMP23AO75900 390 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 TMEM222Q9H0R3 208 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 PLAC1Q9HBJ0 212 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 DOCK1Q14185 1865 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 IGHV3-16A0A0C4DH30 117 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 OR10W1Q8NGF6 305 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 FAM216BQ8N7L0 139 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 FMC1Q96HJ9 113 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 CXCL2P19875 107 aa13.33□□□□□ -0.27
CACNA1A-202ENST00000573710 SPATA25Q9BR10 227 aa13.33□□□□□ -0.27
CACNA1A-202ENST00000573710 IGKV2-40A0A087WW87 121 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 LOC102723996A0A087X1L8 192 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 IGKV2D-40P01614 121 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 RHOGP84095 191 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 PPP1R32Q7Z5V6 425 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 TMEM52Q8NDY8 209 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 MRPL32Q9BYC8 188 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 LOC285556D6RIA3 1793 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 TIMM23O14925 209 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 MAPK1IP1LQ8NDC0 245 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 SCAND1P57086 179 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 C8orf82Q6P1X6 216 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 A0A1B0GW15 77 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 ZNF729A6NN14 1252 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 IGKV1D-16P01601 117 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 TFF1P04155 84 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 UMODP07911 640 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 UBE2BP63146 152 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 RBM3P98179 157 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 SS18Q15532 418 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 C8orf31Q8N9H6 132 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 TNRC6AQ8NDV7 1962 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 FCN3O75636 299 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 ZP1P60852 638 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 DNAJC30Q96LL9 226 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 ACACAQ13085 2346 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 FAM27BQ5VT28 67 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 CENPVL1A0A0U1RR11 272 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 ASCL2Q99929 193 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 TRPM7Q96QT4 1865 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms