RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 LRRC10Q5BKY1 277 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 GFRALQ6UXV0 394 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 OR5AU1Q8NGC0 362 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 MRPL36Q9P0J6 103 aaKnown RBP9.07□□□□□ -0.96
RPAIN-212ENST00000573126 SERF1AO75920 110 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 PRR30Q53SZ7 412 aaPredicted RBP9.07□□□□□ -0.96
RPAIN-212ENST00000573126 CACNG8Q8WXS5 425 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 FAM167A-AS1Q96KT0 104 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 SLC25A2Q9BXI2 301 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 ARL2-SNX15V9GYD0 113 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 PSMB11A5LHX3 300 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 CA1P00915 261 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-212ENST00000573126 ATP5IP56385 69 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-212ENST00000573126 Q8NA96 180 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 TMEM167AQ8TBQ9 72 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 RNASE6Q93091 150 aaKnown RBP9.06□□□□□ -0.96
RPAIN-212ENST00000573126 DNAJC4Q9NNZ3 241 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 DYNLRB1Q9NP97 96 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 ZNF355PQ9NSJ1 428 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 SERTAD4Q9NUC0 356 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 NBASA2RRP1 2371 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 CSMD1Q96PZ7 3565 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 ENSAO43768 121 aaKnown RBP9.06□□□□□ -0.96
RPAIN-212ENST00000573126 COX7A2P2O60397 106 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 IGLV2-23P01705 113 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 LOXP28300 417 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-212ENST00000573126 SELENOTP62341 195 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 C19orf35Q6ZS72 473 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 LHFPL4Q7Z7J7 247 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 PDPNQ86YL7 162 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 TGIF2LXQ8IUE1 241 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 VSTM2AQ8TAG5 236 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 NOL4LQ96MY1 436 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-212ENST00000573126 C19orf24Q9BVV8 132 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 WASHC3Q9Y3C0 194 aa9.06□□□□□ -0.96
RPAIN-212ENST00000573126 TRAV9-1A0A075B6T8 112 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 A0A1W2PN81 502 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 A0A1W2PRE2 83 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 IGLV2-8P01709 118 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 RAB4BP61018 213 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 KIAA1644Q3SXP7 199 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 RUSC1-AS1Q66K80 236 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 HCP5Q6MZN7 132 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 BAGE3Q86Y29 109 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 BAGE2Q86Y30 109 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 PNKDQ8N490 385 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 ST6GALNAC6Q969X2 333 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 TMEM186Q96B77 213 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 NAT8BQ9UHF3 227 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 MALRD1Q5VYJ5 2156 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 LRBAP50851 2863 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 ABCA4P78363 2273 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 A0A1W2PPI3 338 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 USF2Q15853 346 aaPredicted RBP9.05□□□□□ -0.96
RPAIN-212ENST00000573126 IBA57Q5T440 356 aaKnown RBP9.05□□□□□ -0.96
RPAIN-212ENST00000573126 MRPL54Q6P161 138 aaKnown RBP9.05□□□□□ -0.96
RPAIN-212ENST00000573126 MISP3Q96FF7 219 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 NAGKQ9UJ70 344 aa9.05□□□□□ -0.96
RPAIN-212ENST00000573126 POLR3KQ9Y2Y1 108 aaPredicted RBP9.05□□□□□ -0.96
RPAIN-212ENST00000573126 IGKV1D-37A0A075B6S9 117 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 TRAV34A0A0B4J273 112 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 MOSP00540 346 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 PPOXP50336 477 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 C10orf113Q5VZT2 155 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 PATE2Q6UY27 113 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 Q6ZWC4 215 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 IGF2BP2-AS1Q96M15 143 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 NDUFAF3Q9BU61 184 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 MRPL32Q9BYC8 188 aaKnown RBP9.04□□□□□ -0.96
RPAIN-212ENST00000573126 IGHV3-21A0A0B4J1V1 117 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 IGHV1-8P0DP01 117 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 CX3CL1P78423 397 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 ZNF600Q6ZNG1 722 aa9.04□□□□□ -0.96
RPAIN-212ENST00000573126 SSBP3Q9BWW4 388 aaPredicted RBP9.04□□□□□ -0.96
RPAIN-212ENST00000573126 ZNF705FA8MVS1 300 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-212ENST00000573126 SHISA9B4DS77 424 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 E7EQL1 145 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 ISLRO14498 428 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 TNFRSF13BO14836 293 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-212ENST00000573126 ZNF705DP0CH99 300 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-212ENST00000573126 ZNF705BP0CI00 300 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-212ENST00000573126 RNF224P0DH78 156 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 PRSS33Q8NF86 280 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 FAM168AQ92567 244 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 HSPB9Q9BQS6 159 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 PAXXQ9BUH6 204 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 OSTCQ9NRP0 149 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 JKAMPQ9P055 326 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 AMMECR1Q9Y4X0 333 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-212ENST00000573126 TCRBV4S1A1TA0A5B7 111 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 LYNX1G3V0Z9 82 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 LYNX1P0DP58 116 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 ORM2P19652 201 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 CNTFRP26992 372 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 SUB1P53999 127 aaKnown RBP eCLIP9.03□□□□□ -0.96
RPAIN-212ENST00000573126 DLX6P56179 175 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 TPPP2P59282 170 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 VMA21Q3ZAQ7 101 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 TMEM155Q4W5P6 130 aa9.03□□□□□ -0.96
RPAIN-212ENST00000573126 TOMM20LQ6UXN7 152 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms