RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 TRIQKQ629K1 86 aa15.12■□□□□ 0.01
NUP88-204ENST00000572290 DEFB125Q8N687 156 aa15.12■□□□□ 0.01
NUP88-204ENST00000572290 OR52B4Q8NGK2 314 aa15.12■□□□□ 0.01
NUP88-204ENST00000572290 PIGBOS1A0A0B4J2F0 54 aa15.11■□□□□ 0.01
NUP88-204ENST00000572290 OPRK1P41145 380 aa15.11■□□□□ 0.01
NUP88-204ENST00000572290 BAK1Q16611 211 aa15.11■□□□□ 0.01
NUP88-204ENST00000572290 HAGHQ16775 308 aa15.11■□□□□ 0.01
NUP88-204ENST00000572290 NMSQ5H8A3 153 aa15.11■□□□□ 0.01
NUP88-204ENST00000572290 LAMTOR1Q6IAA8 161 aa15.11■□□□□ 0.01
NUP88-204ENST00000572290 WFDC10AQ9H1F0 79 aa15.11■□□□□ 0.01
NUP88-204ENST00000572290 NXPH3O95157 252 aa15.1■□□□□ 0.01
NUP88-204ENST00000572290 TMEM50AO95807 157 aa15.1■□□□□ 0.01
NUP88-204ENST00000572290 VAMP1P23763 118 aa15.1■□□□□ 0.01
NUP88-204ENST00000572290 SMCO1Q147U7 214 aa15.1■□□□□ 0.01
NUP88-204ENST00000572290 OR10C1Q96KK4 312 aa15.1■□□□□ 0.01
NUP88-204ENST00000572290 HIPK2Q9H2X6 1198 aa15.1■□□□□ 0.01
NUP88-204ENST00000572290 FNDC4Q9H6D8 234 aaPredicted RBP15.1■□□□□ 0.01
NUP88-204ENST00000572290 SMPXQ9UHP9 88 aa15.1■□□□□ 0.01
NUP88-204ENST00000572290 TSPAN4O14817 238 aa15.09■□□□□ 0.01
NUP88-204ENST00000572290 MLANAQ16655 118 aa15.09■□□□□ 0.01
NUP88-204ENST00000572290 C2orf83Q53S99 150 aa15.09■□□□□ 0.01
NUP88-204ENST00000572290 LINC00322Q6ZN03 302 aaPredicted RBP15.09■□□□□ 0.01
NUP88-204ENST00000572290 SLC24A4Q8NFF2 622 aa15.09■□□□□ 0.01
NUP88-204ENST00000572290 SPAG8Q99932 426 aaPredicted RBP15.09■□□□□ 0.01
NUP88-204ENST00000572290 SRD5A3Q9H8P0 318 aa15.09■□□□□ 0.01
NUP88-204ENST00000572290 TRAV14DV4A0A0A6YYC5 116 aa15.08■□□□□ 0
NUP88-204ENST00000572290 IGHV7-4-1A0A0J9YVY3 117 aa15.08■□□□□ 0
NUP88-204ENST00000572290 DUXBA0A1W2PPF3 345 aa15.08■□□□□ 0
NUP88-204ENST00000572290 RPS10-NUDT3A0A1W2PQS6 291 aa15.08■□□□□ 0
NUP88-204ENST00000572290 NAP1L6A6NFF2 107 aa15.08■□□□□ 0
NUP88-204ENST00000572290 CLN5O75503 358 aa15.08■□□□□ 0
NUP88-204ENST00000572290 TNFRSF9Q07011 255 aa15.08■□□□□ 0
NUP88-204ENST00000572290 RBMS2Q15434 407 aaKnown RBP15.08■□□□□ 0
NUP88-204ENST00000572290 TOMM20LQ6UXN7 152 aa15.08■□□□□ 0
NUP88-204ENST00000572290 ZNF600Q6ZNG1 722 aa15.08■□□□□ 0
NUP88-204ENST00000572290 CENPSQ8N2Z9 138 aa15.08■□□□□ 0
NUP88-204ENST00000572290 TMEM116Q8NCL8 245 aa15.08■□□□□ 0
NUP88-204ENST00000572290 OR4X1Q8NH49 305 aa15.08■□□□□ 0
NUP88-204ENST00000572290 SDHCQ99643 169 aaPredicted RBP15.08■□□□□ 0
NUP88-204ENST00000572290 SPATA25Q9BR10 227 aa15.08■□□□□ 0
NUP88-204ENST00000572290 GINS3Q9BRX5 216 aa15.08■□□□□ 0
NUP88-204ENST00000572290 MRPL36Q9P0J6 103 aaKnown RBP15.08■□□□□ 0
NUP88-204ENST00000572290 HSPB7Q9UBY9 170 aa15.08■□□□□ 0
NUP88-204ENST00000572290 A0A1B0GU03 582 aa15.07■□□□□ 0
NUP88-204ENST00000572290 SCGB2A1O75556 95 aa15.07■□□□□ 0
NUP88-204ENST00000572290 SFT2D2O95562 160 aa15.07■□□□□ 0
NUP88-204ENST00000572290 PPP1R1AQ13522 171 aa15.07■□□□□ 0
NUP88-204ENST00000572290 NOXA1Q86UR1 476 aa15.07■□□□□ 0
NUP88-204ENST00000572290 LRTM2Q8N967 370 aa15.07■□□□□ 0
NUP88-204ENST00000572290 OR1S1Q8NH92 325 aa15.07■□□□□ 0
NUP88-204ENST00000572290 RNASEH2CQ8TDP1 164 aaKnown RBP15.07■□□□□ 0
NUP88-204ENST00000572290 RHPN1-AS1Q9BWJ2 59 aa15.07■□□□□ 0
NUP88-204ENST00000572290 PUS1Q9Y606 427 aaKnown RBP eCLIP15.07■□□□□ 0
NUP88-204ENST00000572290 IGHV3-49A0A0A0MS15 119 aa15.06■□□□□ 0
NUP88-204ENST00000572290 LINC00854A0A1B0GVQ3 168 aa15.06■□□□□ 0
NUP88-204ENST00000572290 RBMY1BA6NDE4 496 aaKnown RBP15.06■□□□□ 0
NUP88-204ENST00000572290 RBMY1EA6NEQ0 496 aaKnown RBP15.06■□□□□ 0
NUP88-204ENST00000572290 CHEK1O14757 476 aa15.06■□□□□ 0
NUP88-204ENST00000572290 RBMY1DP0C7P1 496 aaKnown RBP15.06■□□□□ 0
NUP88-204ENST00000572290 NPY1RP25929 384 aa15.06■□□□□ 0
NUP88-204ENST00000572290 DTD1Q8TEA8 209 aa15.06■□□□□ 0
NUP88-204ENST00000572290 RBKSQ9H477 322 aa15.06■□□□□ 0
NUP88-204ENST00000572290 IFNA10P01566 189 aa15.05■□□□□ -0
NUP88-204ENST00000572290 SLC25A4P12235 298 aa15.05■□□□□ -0
NUP88-204ENST00000572290 TMEM170AQ8WVE7 144 aa15.05■□□□□ -0
NUP88-204ENST00000572290 RNF2Q99496 336 aa15.05■□□□□ -0
NUP88-204ENST00000572290 ZFAND3Q9H8U3 227 aa15.05■□□□□ -0
NUP88-204ENST00000572290 U3KQ87 197 aa15.05■□□□□ -0
NUP88-204ENST00000572290 TRAV30A0A087WSZ9 112 aa15.04■□□□□ -0
NUP88-204ENST00000572290 OR4C46A6NHA9 309 aa15.04■□□□□ -0
NUP88-204ENST00000572290 CENPXA8MT69 81 aa15.04■□□□□ -0
NUP88-204ENST00000572290 NDUFB6O95139 128 aa15.04■□□□□ -0
NUP88-204ENST00000572290 IL7P13232 177 aa15.04■□□□□ -0
NUP88-204ENST00000572290 BMI1P35226 326 aa15.04■□□□□ -0
NUP88-204ENST00000572290 UBE2MP61081 183 aaKnown RBP15.04■□□□□ -0
NUP88-204ENST00000572290 C7orf50Q9BRJ6 194 aaKnown RBP15.04■□□□□ -0
NUP88-204ENST00000572290 TMED3Q9Y3Q3 217 aa15.04■□□□□ -0
NUP88-204ENST00000572290 IGHV3OR16-13A0A075B7E8 117 aa15.03■□□□□ -0
NUP88-204ENST00000572290 IGHV3-74A0A0B4J1X5 117 aa15.03■□□□□ -0
NUP88-204ENST00000572290 PITX3O75364 302 aa15.03■□□□□ -0
NUP88-204ENST00000572290 ETFRF1Q6IPR1 90 aa15.03■□□□□ -0
NUP88-204ENST00000572290 PRSS54Q6PEW0 395 aa15.03■□□□□ -0
NUP88-204ENST00000572290 IGKV1-17P01599 117 aa15.02■□□□□ -0
NUP88-204ENST00000572290 SLC25A6P12236 298 aa15.02■□□□□ -0
NUP88-204ENST00000572290 RND2P52198 227 aa15.02■□□□□ -0
NUP88-204ENST00000572290 TIGITQ495A1 244 aa15.02■□□□□ -0
NUP88-204ENST00000572290 OR1S2Q8NGQ3 325 aa15.02■□□□□ -0
NUP88-204ENST00000572290 UBQLN2Q9UHD9 624 aa15.02■□□□□ -0
NUP88-204ENST00000572290 FLVCR2Q9UPI3 526 aa15.02■□□□□ -0
NUP88-204ENST00000572290 HOXB5P09067 269 aa15.01□□□□□ -0.01
NUP88-204ENST00000572290 IGLC1P0CG04 106 aa15.01□□□□□ -0.01
NUP88-204ENST00000572290 ATP5IP56385 69 aaPredicted RBP15.01□□□□□ -0.01
NUP88-204ENST00000572290 ST8SIA2Q92186 375 aa15.01□□□□□ -0.01
NUP88-204ENST00000572290 CITED4Q96RK1 184 aa15.01□□□□□ -0.01
NUP88-204ENST00000572290 VSIRQ9H7M9 311 aa15.01□□□□□ -0.01
NUP88-204ENST00000572290 LOC102724200A0A096LPH7 203 aaPredicted RBP15□□□□□ -0.01
NUP88-204ENST00000572290 C9orf170A2RU37 121 aa15□□□□□ -0.01
NUP88-204ENST00000572290 FAM90A26D6RGX4 464 aa15□□□□□ -0.01
NUP88-204ENST00000572290 APOHP02749 345 aaPredicted RBP15□□□□□ -0.01
NUP88-204ENST00000572290 CD5P06127 495 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms