RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 SNRNP40Q96DI7 357 aaKnown RBP11.27□□□□□ -0.61
TRPV1-206ENST00000571088 ZNF414Q96IQ9 312 aa11.27□□□□□ -0.61
TRPV1-206ENST00000571088 C18orf15Q96N68 181 aa11.27□□□□□ -0.61
TRPV1-206ENST00000571088 JKAMPQ9P055 326 aa11.27□□□□□ -0.61
TRPV1-206ENST00000571088 HIGD1AQ9Y241 93 aa11.27□□□□□ -0.61
TRPV1-206ENST00000571088 NOTCH3Q9UM47 2321 aa11.27□□□□□ -0.61
TRPV1-206ENST00000571088 PTPRSQ13332 1948 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 CACNA1BQ00975 2339 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 LOC107984156A0A0G2JMH3 177 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 A0A1W2PRE2 83 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 MOSP00540 346 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 ANOS1P23352 680 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 HIST1H1AQ02539 215 aaPredicted RBP11.26□□□□□ -0.61
TRPV1-206ENST00000571088 ARL17AQ8IVW1 177 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 RAB1CQ92928 201 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 MGST2Q99735 147 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 MCRIP2Q9BUT9 160 aaKnown RBP11.26□□□□□ -0.61
TRPV1-206ENST00000571088 RNF7Q9UBF6 113 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 NTN3O00634 580 aaPredicted RBP11.26□□□□□ -0.61
TRPV1-206ENST00000571088 REG1AP05451 166 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 PYYP10082 97 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 RPL11P62913 178 aaKnown RBP11.26□□□□□ -0.61
TRPV1-206ENST00000571088 SMAGPQ0VAQ4 97 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 CCL13Q99616 98 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 SLC25A33Q9BSK2 321 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 IGHV3-72A0A0B4J1Y9 119 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 GNG5P63218 68 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 ZADH2Q8N4Q0 377 aa11.26□□□□□ -0.61
TRPV1-206ENST00000571088 RPP21Q9H633 154 aaKnown RBP11.26□□□□□ -0.61
TRPV1-206ENST00000571088 H3BVH4 76 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 IGKV1-39P01597 117 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 IGKV1D-39P04432 117 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 NTF4P34130 210 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 FAM214BQ7L5A3 538 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 IFI27L2Q9H2X8 130 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 TRBV6-6A0A0A6YYG2 114 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 PINLYPA6NC86 204 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 C15orf62A8K5M9 175 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 F2Z2F3 143 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 TWIST1Q15672 202 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 OR2T8A6NH00 312 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 CEACAM8P31997 349 aaPredicted RBP11.25□□□□□ -0.61
TRPV1-206ENST00000571088 PSG7Q13046 419 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 ACP7Q6ZNF0 438 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 Q6ZSR3 168 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 WFDC3Q8IUB2 231 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 OR9G1Q8NH87 305 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 RNASE8Q8TDE3 154 aaKnown RBP11.25□□□□□ -0.61
TRPV1-206ENST00000571088 RPEQ96AT9 228 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 GPR82Q96P67 336 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 PROK2Q9HC23 129 aa11.25□□□□□ -0.61
TRPV1-206ENST00000571088 TMEM189A5PLL7 270 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 HOXA4Q00056 320 aaPredicted RBP11.24□□□□□ -0.61
TRPV1-206ENST00000571088 FOXF2Q12947 444 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 LYRM7Q5U5X0 104 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 MYOZ3Q8TDC0 251 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 SCRT1Q9BWW7 348 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 A0A1B0GUT8 65 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 SLC25A17O43808 307 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 PSPNO60542 156 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 COX7A1P24310 79 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 COLCA1Q6ZS62 124 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 HIST1H4GQ99525 98 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 GP6Q9HCN6 339 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 RPL7P18124 248 aaKnown RBP11.24□□□□□ -0.61
TRPV1-206ENST00000571088 DUTP33316 252 aaKnown RBP11.24□□□□□ -0.61
TRPV1-206ENST00000571088 KIR2DL2P43627 348 aaPredicted RBP11.24□□□□□ -0.61
TRPV1-206ENST00000571088 RBPMS2Q6ZRY4 209 aaKnown RBP11.24□□□□□ -0.61
TRPV1-206ENST00000571088 C5orf30Q96GV9 206 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 SLC25A10Q9UBX3 287 aaPredicted RBP11.24□□□□□ -0.61
TRPV1-206ENST00000571088 CCL25O15444 150 aa11.24□□□□□ -0.61
TRPV1-206ENST00000571088 PEAR1Q5VY43 1037 aaPredicted RBP11.23□□□□□ -0.61
TRPV1-206ENST00000571088 GCSAMQ8N6F7 178 aa11.23□□□□□ -0.61
TRPV1-206ENST00000571088 RIF1Q5UIP0 2472 aaKnown RBP11.23□□□□□ -0.61
TRPV1-206ENST00000571088 ITLN1Q8WWA0 313 aa11.23□□□□□ -0.61
TRPV1-206ENST00000571088 NGBQ9NPG2 151 aa11.23□□□□□ -0.61
TRPV1-206ENST00000571088 TRAV5A0A0B4J249 113 aa11.23□□□□□ -0.61
TRPV1-206ENST00000571088 TRAV8-6A0A0B4J262 113 aa11.23□□□□□ -0.61
TRPV1-206ENST00000571088 AREGP15514 252 aa11.23□□□□□ -0.61
TRPV1-206ENST00000571088 CD40P25942 277 aa11.23□□□□□ -0.61
TRPV1-206ENST00000571088 RPL27AP46776 148 aaKnown RBP11.23□□□□□ -0.61
TRPV1-206ENST00000571088 PDLIM4P50479 330 aa11.23□□□□□ -0.61
TRPV1-206ENST00000571088 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
TRPV1-206ENST00000571088 SCNM1Q9BWG6 230 aa11.23□□□□□ -0.61
TRPV1-206ENST00000571088 CELA3BP08861 270 aa11.22□□□□□ -0.61
TRPV1-206ENST00000571088 SEC11AP67812 179 aa11.22□□□□□ -0.61
TRPV1-206ENST00000571088 MRPL27Q9P0M9 148 aaKnown RBP11.22□□□□□ -0.61
TRPV1-206ENST00000571088 ZNF257Q9Y2Q1 563 aa11.22□□□□□ -0.61
TRPV1-206ENST00000571088 IGLL1P15814 213 aa11.22□□□□□ -0.61
TRPV1-206ENST00000571088 IGHV2OR16-5A0A0B4J2B6 119 aa11.22□□□□□ -0.61
TRPV1-206ENST00000571088 LINC00473A8K010 186 aa11.22□□□□□ -0.61
TRPV1-206ENST00000571088 PSMB2P49721 201 aa11.22□□□□□ -0.61
TRPV1-206ENST00000571088 C18orf32Q8TCD1 76 aa11.22□□□□□ -0.61
TRPV1-206ENST00000571088 NCBP2LA6PVI3 153 aaKnown RBP11.21□□□□□ -0.61
TRPV1-206ENST00000571088 SYS1-DBNDD2H3BUS1 97 aa11.21□□□□□ -0.61
TRPV1-206ENST00000571088 DKK1O94907 266 aa11.21□□□□□ -0.61
TRPV1-206ENST00000571088 MBNL2Q5VZF2 373 aaKnown RBP11.21□□□□□ -0.61
TRPV1-206ENST00000571088 LINC00479Q96M42 142 aa11.21□□□□□ -0.61
TRPV1-206ENST00000571088 TRAV3A0A0B4J244 114 aa11.21□□□□□ -0.61
TRPV1-206ENST00000571088 C15orf61A6NNL5 157 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms