RNA–Protein interactions for RNA: ENST00000570403.1

TRAP1-203, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 521 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-203ENST00000570403 NUPL2O15504 423 aaKnown RBP17■□□□□ 0.31
TRAP1-203ENST00000570403 IGHV3-48P01763 117 aa17■□□□□ 0.31
TRAP1-203ENST00000570403 IL7P13232 177 aa17■□□□□ 0.31
TRAP1-203ENST00000570403 VAMP1P23763 118 aa17■□□□□ 0.31
TRAP1-203ENST00000570403 HTR2BP41595 481 aa17■□□□□ 0.31
TRAP1-203ENST00000570403 RELQ04864 619 aaPredicted RBP17■□□□□ 0.31
TRAP1-203ENST00000570403 SMCO1Q147U7 214 aa17■□□□□ 0.31
TRAP1-203ENST00000570403 LRTM2Q8N967 370 aa17■□□□□ 0.31
TRAP1-203ENST00000570403 HEYLQ9NQ87 328 aaPredicted RBP17■□□□□ 0.31
TRAP1-203ENST00000570403 RYR3Q15413 4870 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 TRAV25A0A0B4J276 109 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 CENPXA8MT69 81 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 CEBPZOSA8MTT3 80 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 OR11H12B2RN74 326 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 NDUFB6O95139 128 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 SFT2D2O95562 160 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 UBE2MP61081 183 aaKnown RBP16.99■□□□□ 0.31
TRAP1-203ENST00000570403 PPP1R1AQ13522 171 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 LINC00299Q6ZSB3 139 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 SLC16A13Q7RTY0 426 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 DUSP18Q8NEJ0 188 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 SPATA25Q9BR10 227 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 C20orf24Q9BUV8 137 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 SRD5A3Q9H8P0 318 aa16.99■□□□□ 0.31
TRAP1-203ENST00000570403 A0A1B0GU03 582 aa16.98■□□□□ 0.31
TRAP1-203ENST00000570403 RBMY1BA6NDE4 496 aaKnown RBP16.98■□□□□ 0.31
TRAP1-203ENST00000570403 RBMY1EA6NEQ0 496 aaKnown RBP16.98■□□□□ 0.31
TRAP1-203ENST00000570403 K7EMT4 169 aa16.98■□□□□ 0.31
TRAP1-203ENST00000570403 GNG7O60262 68 aa16.98■□□□□ 0.31
TRAP1-203ENST00000570403 RBMY1DP0C7P1 496 aaKnown RBP16.98■□□□□ 0.31
TRAP1-203ENST00000570403 NPBWR1P48145 328 aa16.98■□□□□ 0.31
TRAP1-203ENST00000570403 ANKRD55Q3KP44 614 aa16.98■□□□□ 0.31
TRAP1-203ENST00000570403 HSPB7Q9UBY9 170 aa16.98■□□□□ 0.31
TRAP1-203ENST00000570403 LINC00854A0A1B0GVQ3 168 aa16.97■□□□□ 0.31
TRAP1-203ENST00000570403 A6NHS1 94 aa16.97■□□□□ 0.31
TRAP1-203ENST00000570403 C15orf62A8K5M9 175 aa16.97■□□□□ 0.31
TRAP1-203ENST00000570403 TNFRSF9Q07011 255 aa16.97■□□□□ 0.31
TRAP1-203ENST00000570403 C2orf83Q53S99 150 aa16.97■□□□□ 0.31
TRAP1-203ENST00000570403 RBPMS2Q6ZRY4 209 aaKnown RBP16.97■□□□□ 0.31
TRAP1-203ENST00000570403 OR52B4Q8NGK2 314 aa16.97■□□□□ 0.31
TRAP1-203ENST00000570403 CITED4Q96RK1 184 aa16.97■□□□□ 0.31
TRAP1-203ENST00000570403 HIPK2Q9H2X6 1198 aa16.97■□□□□ 0.31
TRAP1-203ENST00000570403 C3orf84H3BNL1 204 aa16.96■□□□□ 0.31
TRAP1-203ENST00000570403 ZNF207O43670 478 aaKnown RBP16.96■□□□□ 0.31
TRAP1-203ENST00000570403 NXPH3O95157 252 aa16.96■□□□□ 0.31
TRAP1-203ENST00000570403 BTCP35070 178 aa16.96■□□□□ 0.31
TRAP1-203ENST00000570403 SLC24A4Q8NFF2 622 aa16.96■□□□□ 0.31
TRAP1-203ENST00000570403 MUC7Q8TAX7 377 aa16.96■□□□□ 0.31
TRAP1-203ENST00000570403 OR10C1Q96KK4 312 aa16.96■□□□□ 0.31
TRAP1-203ENST00000570403 FNDC4Q9H6D8 234 aaPredicted RBP16.96■□□□□ 0.31
TRAP1-203ENST00000570403 TSPAN4O14817 238 aa16.95■□□□□ 0.3
TRAP1-203ENST00000570403 SLC25A6P12236 298 aa16.95■□□□□ 0.3
TRAP1-203ENST00000570403 OPRK1P41145 380 aa16.95■□□□□ 0.3
TRAP1-203ENST00000570403 OR1S1Q8NH92 325 aa16.95■□□□□ 0.3
TRAP1-203ENST00000570403 SPAG8Q99932 426 aaPredicted RBP16.95■□□□□ 0.3
TRAP1-203ENST00000570403 EDA2RQ9HAV5 297 aa16.95■□□□□ 0.3
TRAP1-203ENST00000570403 TMED3Q9Y3Q3 217 aa16.95■□□□□ 0.3
TRAP1-203ENST00000570403 PITX3O75364 302 aa16.94■□□□□ 0.3
TRAP1-203ENST00000570403 TMEM50AO95807 157 aa16.94■□□□□ 0.3
TRAP1-203ENST00000570403 CNPY1Q3B7I2 92 aa16.94■□□□□ 0.3
TRAP1-203ENST00000570403 NOXA1Q86UR1 476 aa16.94■□□□□ 0.3
TRAP1-203ENST00000570403 OR4X1Q8NH49 305 aa16.94■□□□□ 0.3
TRAP1-203ENST00000570403 RNASEH2CQ8TDP1 164 aaKnown RBP16.94■□□□□ 0.3
TRAP1-203ENST00000570403 RBKSQ9H477 322 aa16.94■□□□□ 0.3
TRAP1-203ENST00000570403 STARD9Q9P2P6 4700 aa16.94■□□□□ 0.3
TRAP1-203ENST00000570403 RPS10-NUDT3A0A1W2PQS6 291 aa16.93■□□□□ 0.3
TRAP1-203ENST00000570403 PLA2G10O15496 165 aa16.93■□□□□ 0.3
TRAP1-203ENST00000570403 MLANAQ16655 118 aa16.93■□□□□ 0.3
TRAP1-203ENST00000570403 DTD1Q8TEA8 209 aa16.93■□□□□ 0.3
TRAP1-203ENST00000570403 RETNQ9HD89 108 aa16.93■□□□□ 0.3
TRAP1-203ENST00000570403 FLVCR2Q9UPI3 526 aa16.93■□□□□ 0.3
TRAP1-203ENST00000570403 U3KQ87 197 aa16.93■□□□□ 0.3
TRAP1-203ENST00000570403 C9orf170A2RU37 121 aa16.92■□□□□ 0.3
TRAP1-203ENST00000570403 CLN5O75503 358 aa16.92■□□□□ 0.3
TRAP1-203ENST00000570403 YIF1AO95070 293 aa16.92■□□□□ 0.3
TRAP1-203ENST00000570403 NPY1RP25929 384 aa16.92■□□□□ 0.3
TRAP1-203ENST00000570403 TMEM170AQ8WVE7 144 aa16.92■□□□□ 0.3
TRAP1-203ENST00000570403 CCDC32Q9BV29 185 aa16.92■□□□□ 0.3
TRAP1-203ENST00000570403 MRPL36Q9P0J6 103 aaKnown RBP16.92■□□□□ 0.3
TRAP1-203ENST00000570403 SMPXQ9UHP9 88 aa16.92■□□□□ 0.3
TRAP1-203ENST00000570403 CSMD3Q7Z407 3707 aa16.92■□□□□ 0.3
TRAP1-203ENST00000570403 IGHV7-4-1A0A0J9YVY3 117 aa16.91■□□□□ 0.3
TRAP1-203ENST00000570403 SCGB2A1O75556 95 aa16.91■□□□□ 0.3
TRAP1-203ENST00000570403 ZNF600Q6ZNG1 722 aa16.91■□□□□ 0.3
TRAP1-203ENST00000570403 S100ZQ8WXG8 99 aa16.91■□□□□ 0.3
TRAP1-203ENST00000570403 FAM90A26D6RGX4 464 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 CHEK1O14757 476 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 LYRM1O43325 122 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 IFNA10P01566 189 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 OR4E1P0C645 316 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 SLC25A4P12235 298 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 ATP5IP56385 69 aaPredicted RBP16.9■□□□□ 0.3
TRAP1-203ENST00000570403 LAMTOR1Q6IAA8 161 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 ETFRF1Q6IPR1 90 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 TOMM20LQ6UXN7 152 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 RNF2Q99496 336 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 RHPN1-AS1Q9BWJ2 59 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 ZFAND3Q9H8U3 227 aa16.9■□□□□ 0.3
TRAP1-203ENST00000570403 TRAV30A0A087WSZ9 112 aa16.89■□□□□ 0.29
TRAP1-203ENST00000570403 TRAV14DV4A0A0A6YYC5 116 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms