RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 DUSP18Q8NEJ0 188 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 FCGR1BQ92637 280 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 S100A16Q96FQ6 103 aaKnown RBP8.69□□□□□ -1.02
CAPN3-220ENST00000569827 FNDC4Q9H6D8 234 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-220ENST00000569827 TBC1D24Q9ULP9 559 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 IGKV1-5P01602 117 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 MED14OSP0DP75 135 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 RNASE2P10153 161 aaKnown RBP8.68□□□□□ -1.02
CAPN3-220ENST00000569827 NAT1P18440 290 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 NPPCP23582 126 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 NPBWR1P48145 328 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 DEFB1P60022 68 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 TSPAN5P62079 268 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 LSM3P62310 102 aaKnown RBP8.68□□□□□ -1.02
CAPN3-220ENST00000569827 ERHP84090 104 aaKnown RBP8.68□□□□□ -1.02
CAPN3-220ENST00000569827 TIGITQ495A1 244 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 PSMG4Q5JS54 123 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 ZNF575Q86XF7 245 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 SLC35G3Q8N808 338 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 CSNK1G2-AS1Q8NCQ2 148 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 DCANP1Q8TF63 244 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 RNF126Q9BV68 326 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 XCL2Q9UBD3 114 aa8.68□□□□□ -1.02
CAPN3-220ENST00000569827 APOBP04114 4563 aaKnown RBP8.67□□□□□ -1.02
CAPN3-220ENST00000569827 TRAV2A0A0B4J234 112 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 M0QYG6 137 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 AMBPP02760 352 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 SPP1P10451 314 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 ETV6P41212 452 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 EMP1P54849 157 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 FXYD7P58549 80 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 DHRS2Q13268 280 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 MORN3Q6PF18 240 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-220ENST00000569827 SNX29P2Q8IUI4 249 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 CADM3Q8N126 398 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 POM121L12Q8N7R1 296 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 METTL26Q96S19 204 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 TMEM231Q9H6L2 316 aa8.67□□□□□ -1.02
CAPN3-220ENST00000569827 A0A0B4J293 547 aa8.66□□□□□ -1.02
CAPN3-220ENST00000569827 A0A0G2JRQ6 117 aa8.66□□□□□ -1.02
CAPN3-220ENST00000569827 IFNA17P01571 189 aa8.66□□□□□ -1.02
CAPN3-220ENST00000569827 CD5P06127 495 aa8.66□□□□□ -1.02
CAPN3-220ENST00000569827 CRYBB3P26998 211 aa8.66□□□□□ -1.02
CAPN3-220ENST00000569827 PRSS3P35030 304 aa8.66□□□□□ -1.02
CAPN3-220ENST00000569827 SNCAP37840 140 aa8.66□□□□□ -1.02
CAPN3-220ENST00000569827 RPS19P39019 145 aaKnown RBP8.66□□□□□ -1.02
CAPN3-220ENST00000569827 OPRK1P41145 380 aa8.66□□□□□ -1.02
CAPN3-220ENST00000569827 HOXA1P49639 335 aaPredicted RBP8.66□□□□□ -1.02
CAPN3-220ENST00000569827 AKR1C2P52895 323 aa8.66□□□□□ -1.02
CAPN3-220ENST00000569827 TMEM230Q96A57 120 aa8.66□□□□□ -1.02
CAPN3-220ENST00000569827 TP53RKQ96S44 253 aa8.66□□□□□ -1.02
CAPN3-220ENST00000569827 CLN5O75503 358 aa8.65□□□□□ -1.02
CAPN3-220ENST00000569827 IGKV1-17P01599 117 aa8.65□□□□□ -1.02
CAPN3-220ENST00000569827 IGKV3-20P01619 116 aa8.65□□□□□ -1.02
CAPN3-220ENST00000569827 PGAM2P15259 253 aa8.65□□□□□ -1.02
CAPN3-220ENST00000569827 CENPSQ8N2Z9 138 aa8.65□□□□□ -1.02
CAPN3-220ENST00000569827 GPX8Q8TED1 209 aa8.65□□□□□ -1.02
CAPN3-220ENST00000569827 GRAMD2BQ96HH9 432 aa8.65□□□□□ -1.02
CAPN3-220ENST00000569827 RAB40CQ96S21 281 aa8.65□□□□□ -1.02
CAPN3-220ENST00000569827 NDUFAF3Q9BU61 184 aa8.65□□□□□ -1.02
CAPN3-220ENST00000569827 PLA2G2EQ9NZK7 142 aa8.65□□□□□ -1.02
CAPN3-220ENST00000569827 IGHV3OR16-12A0A075B7B8 117 aa8.64□□□□□ -1.03
CAPN3-220ENST00000569827 A0A1W2PS18 150 aa8.64□□□□□ -1.03
CAPN3-220ENST00000569827 HELTA6NFD8 242 aa8.64□□□□□ -1.03
CAPN3-220ENST00000569827 P0C879 139 aa8.64□□□□□ -1.03
CAPN3-220ENST00000569827 P0DMU3 169 aa8.64□□□□□ -1.03
CAPN3-220ENST00000569827 FAM231AP0DMU4 169 aa8.64□□□□□ -1.03
CAPN3-220ENST00000569827 FAM231CP0DMU5 169 aa8.64□□□□□ -1.03
CAPN3-220ENST00000569827 S100GP29377 79 aa8.64□□□□□ -1.03
CAPN3-220ENST00000569827 SP6Q3SY56 376 aa8.64□□□□□ -1.03
CAPN3-220ENST00000569827 UBE2DNLQ8IWF7 75 aa8.64□□□□□ -1.03
CAPN3-220ENST00000569827 GLMPQ8WWB7 406 aa8.64□□□□□ -1.03
CAPN3-220ENST00000569827 NXPH3O95157 252 aa8.63□□□□□ -1.03
CAPN3-220ENST00000569827 HTN3P15516 51 aa8.63□□□□□ -1.03
CAPN3-220ENST00000569827 RND2P52198 227 aa8.63□□□□□ -1.03
CAPN3-220ENST00000569827 PIGPP57054 158 aa8.63□□□□□ -1.03
CAPN3-220ENST00000569827 USF2Q15853 346 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-220ENST00000569827 GDF5OSQ5U4N7 250 aa8.63□□□□□ -1.03
CAPN3-220ENST00000569827 OR4X1Q8NH49 305 aa8.63□□□□□ -1.03
CAPN3-220ENST00000569827 FAM212BQ9NTI7 297 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-220ENST00000569827 COMMD3Q9UBI1 195 aa8.63□□□□□ -1.03
CAPN3-220ENST00000569827 FAM90A26D6RGX4 464 aa8.62□□□□□ -1.03
CAPN3-220ENST00000569827 IFNA10P01566 189 aa8.62□□□□□ -1.03
CAPN3-220ENST00000569827 TMEM41BQ5BJD5 291 aa8.62□□□□□ -1.03
CAPN3-220ENST00000569827 LPCAT3Q6P1A2 487 aa8.62□□□□□ -1.03
CAPN3-220ENST00000569827 C16orf54Q6UWD8 224 aa8.62□□□□□ -1.03
CAPN3-220ENST00000569827 Q6ZRM9 215 aa8.62□□□□□ -1.03
CAPN3-220ENST00000569827 RNASE11Q8TAA1 199 aaKnown RBP8.62□□□□□ -1.03
CAPN3-220ENST00000569827 NARS2Q96I59 477 aaKnown RBP8.62□□□□□ -1.03
CAPN3-220ENST00000569827 PDCD10Q9BUL8 212 aa8.62□□□□□ -1.03
CAPN3-220ENST00000569827 ENY2Q9NPA8 101 aa8.62□□□□□ -1.03
CAPN3-220ENST00000569827 U3KQE9 123 aa8.62□□□□□ -1.03
CAPN3-220ENST00000569827 HNRNPCP07910 306 aaKnown RBP eCLIP8.61□□□□□ -1.03
CAPN3-220ENST00000569827 IGLC1P0CG04 106 aa8.61□□□□□ -1.03
CAPN3-220ENST00000569827 RCVRNP35243 200 aa8.61□□□□□ -1.03
CAPN3-220ENST00000569827 SUB1P53999 127 aaKnown RBP eCLIP8.61□□□□□ -1.03
CAPN3-220ENST00000569827 UCP3P55916 312 aa8.61□□□□□ -1.03
CAPN3-220ENST00000569827 DHODHQ02127 395 aa8.61□□□□□ -1.03
CAPN3-220ENST00000569827 TRIM16LQ309B1 348 aa8.61□□□□□ -1.03
CAPN3-220ENST00000569827 DNAH5Q8TE73 4624 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms