RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 MOB3BQ86TA1 216 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 PPP1R27Q86WC6 154 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 NPBQ8NG41 125 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 OR1P1Q8NH06 330 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 OR2T6Q8NHC8 308 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 SSMEM1Q8WWF3 244 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 C11orf52Q96A22 123 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 ISOC2Q96AB3 205 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 RPEQ96AT9 228 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 SLC25A33Q9BSK2 321 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 SSBP4Q9BWG4 385 aaPredicted RBP4.31□□□□□ -1.72
SF3B3-213ENST00000569687 MRPL32Q9BYC8 188 aaKnown RBP4.31□□□□□ -1.72
SF3B3-213ENST00000569687 PARLQ9H300 379 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 SEPSECSQ9HD40 501 aaKnown RBP4.31□□□□□ -1.72
SF3B3-213ENST00000569687 TMEM167BQ9NRX6 74 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 METTL1Q9UBP6 276 aaKnown RBP4.31□□□□□ -1.72
SF3B3-213ENST00000569687 DIDO1Q9BTC0 2240 aaKnown RBP4.31□□□□□ -1.72
SF3B3-213ENST00000569687 ANKHD1Q8IWZ3 2542 aaKnown RBP4.31□□□□□ -1.72
SF3B3-213ENST00000569687 SPTA1P02549 2419 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 TET2Q6N021 2002 aaPredicted RBP4.3□□□□□ -1.72
SF3B3-213ENST00000569687 IGKV1D-37A0A075B6S9 117 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 A0A1W2PPR1 153 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 A0A1W2PRE2 83 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 TCRBV4S1A1TA0A5B7 111 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 UBE2CO00762 179 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 PHOX2AO14813 284 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 PPP1R2P9O14990 202 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 FOXH1O75593 365 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 NDUFB4O95168 129 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 CXCL1P09341 107 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 C8orf88P0DMB2 117 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 SRP14P37108 136 aaKnown RBP4.3□□□□□ -1.72
SF3B3-213ENST00000569687 GPR6P46095 362 aaPredicted RBP4.3□□□□□ -1.72
SF3B3-213ENST00000569687 RPL27AP46776 148 aaKnown RBP4.3□□□□□ -1.72
SF3B3-213ENST00000569687 TAS2R45P59539 299 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 PLP1P60201 277 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 ARF6P62330 175 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 FOXL1Q12952 345 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 EBI3Q14213 229 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 LDLRAD2Q5SZI1 272 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 MINOS1Q5TGZ0 78 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 FAM78BQ5VT40 261 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 SPATA31B1PQ5VZV4 182 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 CST9LP1Q5W188 147 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 MIR17HGQ75NE6 70 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 LINC00518Q8N0U6 118 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 TMEM116Q8NCL8 245 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 OR51G1Q8NGK1 321 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 OR1L6Q8NGR2 347 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 OR1L4Q8NGR5 311 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 Q8WTZ3 238 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 IGFBPL1Q8WX77 278 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 TMEM37Q8WXS4 190 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 TMEM190Q8WZ59 177 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 CFHR4Q92496 578 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 NPIPB3Q92617 1050 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 RPUSD4Q96CM3 377 aaKnown RBP4.3□□□□□ -1.72
SF3B3-213ENST00000569687 BTF3L4Q96K17 158 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 FAM210BQ96KR6 192 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 FAM167A-AS1Q96KT0 104 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 UHRF2Q96PU4 802 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 PFDN5Q99471 154 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 TRGV9Q99603 122 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 SSBP3Q9BWW4 388 aaPredicted RBP4.3□□□□□ -1.72
SF3B3-213ENST00000569687 SAV1Q9H4B6 383 aaPredicted RBP4.3□□□□□ -1.72
SF3B3-213ENST00000569687 FNDC4Q9H6D8 234 aaPredicted RBP4.3□□□□□ -1.72
SF3B3-213ENST00000569687 MINOS1-NBL1R4GNA1 71 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 CFAP46Q8IYW2 2715 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 MALRD1Q5VYJ5 2156 aa4.3□□□□□ -1.72
SF3B3-213ENST00000569687 YLPM1P49750 1951 aaKnown RBP4.29□□□□□ -1.72
SF3B3-213ENST00000569687 TGIF2-C20orf24A0A0A6YYL0 155 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 IGHV3-72A0A0B4J1Y9 119 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 TEX22C9J3V5 150 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 C9JCJ5 164 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 AP4M1O00189 453 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 FCN1O00602 326 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 GGCTO75223 188 aaKnown RBP4.29□□□□□ -1.72
SF3B3-213ENST00000569687 ACTL6BO94805 426 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 NDUFA3O95167 84 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 MOSP00540 346 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 TYMSP04818 313 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 DEFA4P12838 97 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 HOXA5P20719 270 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 COX7A1P24310 79 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 RPS10P46783 165 aaKnown RBP4.29□□□□□ -1.72
SF3B3-213ENST00000569687 ATP5G3P48201 142 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 MFAP2P55001 183 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 SNRPEP62304 92 aaKnown RBP4.29□□□□□ -1.72
SF3B3-213ENST00000569687 LCN2P80188 198 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 SSBP2P81877 361 aaPredicted RBP4.29□□□□□ -1.72
SF3B3-213ENST00000569687 ADIRFQ15847 76 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 ZNF674Q2M3X9 581 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 KLK9Q2XQG4 91 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 C10orf55Q5SWW7 151 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 CCDC144NLQ6NUI1 221 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 ZNF343Q6P1L6 599 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 PATE2Q6UY27 113 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 C16orf82Q7Z2V1 217 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 LINC01551Q86U37 167 aa4.29□□□□□ -1.72
SF3B3-213ENST00000569687 Q8N6K4 173 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms