RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 LINC01551Q86U37 167 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 HIST3H2BBQ8N257 126 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 OR2T10Q8NGZ9 312 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 OR9G1Q8NH87 305 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 OR2T6Q8NHC8 308 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 SCNM1Q9BWG6 230 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 COL6A6A6NMZ7 2263 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 PTPRBP23467 1997 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 DYSFO75923 2080 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 TRBV20OR9-2A0A075B6H5 130 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 TRBV24-1A0A075B6N3 115 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 SEC14L6B5MCN3 397 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 F6UZH7 168 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 MPDU1O75352 247 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 CXorf1O96002 111 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 SPACA3Q8IXA5 215 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 LINC01560Q8TB33 94 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 FOXA2Q9Y261 457 aaPredicted RBP7.13□□□□□ -1.27
LINC00558-201ENST00000569422 TET2Q6N021 2002 aaPredicted RBP7.13□□□□□ -1.27
LINC00558-201ENST00000569422 PTPRQQ9UMZ3 2332 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 TRBV7-9A0A0J9YWB2 115 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 FAM90A27PA6NNH2 459 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 SLC17A3O00476 420 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 UPK2O00526 184 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 DVL1O14640 695 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 NDUFB3O43676 98 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 PDE6DO43924 150 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 PLAUP00749 431 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 APOA2P02652 100 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 GCHFRP30047 84 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 LEMD1Q68G75 181 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 TMEM106BQ9NUM4 274 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 PRNDQ9UKY0 176 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 PLXNB1O43157 2135 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 ZZEF1O43149 2961 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 IGKV1OR2-108A0A075B7D4 117 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 A0A1B0GUS0 222 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 MDFIC2A0A1B0GVS7 189 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 FAM90A9PA6NNJ1 464 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 M0QXV9 152 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 TDGF1P3P51864 188 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 RHOBP62745 196 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 OR5I1Q13606 314 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 SGMS2Q8NHU3 365 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 OCC1Q8TAD7 63 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 FLYWCH2Q96CP2 140 aaKnown RBP7.12□□□□□ -1.27
LINC00558-201ENST00000569422 ADTRPQ96IZ2 230 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 NABP2Q9BQ15 211 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 PRO1933Q9H354 126 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 SRD5A3Q9H8P0 318 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 LINC00312Q9Y6C7 94 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 TMEM178BH3BS89 294 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 PTTG1IPP53801 180 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 PKIAP61925 76 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 LRRC10Q5BKY1 277 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 C19orf35Q6ZS72 473 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 TMEM144Q7Z5S9 345 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 RITA1Q96K30 269 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 KCNIP2Q9NS61 270 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 CTSZQ9UBR2 303 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 LSM4Q9Y4Z0 139 aaKnown RBP7.12□□□□□ -1.27
LINC00558-201ENST00000569422 MED13LQ71F56 2210 aa7.12□□□□□ -1.27
LINC00558-201ENST00000569422 TRAV5A0A0B4J249 113 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 LY6HO94772 140 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 CRYBB3P26998 211 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 LGALS4P56470 323 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 SSBP2P81877 361 aaPredicted RBP7.11□□□□□ -1.27
LINC00558-201ENST00000569422 TEX36Q5VZQ5 186 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 KCNIP4Q6PIL6 250 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.11□□□□□ -1.27
LINC00558-201ENST00000569422 BEND2Q8NDZ0 799 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 NUP37Q8NFH4 326 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 IGFBPL1Q8WX77 278 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 E7EQL1 145 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 TGOLN2O43493 480 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 GRNP28799 593 aaKnown RBP7.11□□□□□ -1.27
LINC00558-201ENST00000569422 SLC35B1P78383 322 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 PRCDQ00LT1 54 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 TBR1Q16650 682 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 HCP5Q6MZN7 132 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 RNASE6Q93091 150 aaKnown RBP7.11□□□□□ -1.27
LINC00558-201ENST00000569422 SFRP2Q96HF1 295 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 HIST1H2BLQ99880 126 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 TPSG1Q9NRR2 321 aa7.11□□□□□ -1.27
LINC00558-201ENST00000569422 ZNF705GA8MUZ8 300 aaPredicted RBP7.1□□□□□ -1.27
LINC00558-201ENST00000569422 IL3RAP26951 378 aa7.1□□□□□ -1.27
LINC00558-201ENST00000569422 RPL8P62917 257 aaKnown RBP7.1□□□□□ -1.27
LINC00558-201ENST00000569422 SUMO1P63165 101 aaKnown RBP7.1□□□□□ -1.27
LINC00558-201ENST00000569422 RNF151Q2KHN1 245 aa7.1□□□□□ -1.27
LINC00558-201ENST00000569422 HLA-DRB5Q30154 266 aa7.1□□□□□ -1.27
LINC00558-201ENST00000569422 UHRF2Q96PU4 802 aa7.1□□□□□ -1.27
LINC00558-201ENST00000569422 IMMP2LQ96T52 175 aa7.1□□□□□ -1.27
LINC00558-201ENST00000569422 VPS25Q9BRG1 176 aa7.1□□□□□ -1.27
LINC00558-201ENST00000569422 C1orf43Q9BWL3 253 aa7.1□□□□□ -1.27
LINC00558-201ENST00000569422 MALRD1Q5VYJ5 2156 aa7.1□□□□□ -1.27
LINC00558-201ENST00000569422 H0YJW9 148 aa7.1□□□□□ -1.27
LINC00558-201ENST00000569422 PRB4P10163 310 aaPredicted RBP7.1□□□□□ -1.27
LINC00558-201ENST00000569422 DNLZQ5SXM8 178 aa7.1□□□□□ -1.27
LINC00558-201ENST00000569422 ERASQ7Z444 233 aa7.1□□□□□ -1.27
LINC00558-201ENST00000569422 ELOVL5Q9NYP7 299 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms