RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	CAV1	Q03135	178 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	PLCXD2	Q0VAA5	305 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	HTR4	Q13639	388 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	KISS1	Q15726	138 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	ZNF141	Q15928	474 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	LGALS9B	Q3B8N2	356 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	MRPL51	Q4U2R6	128 aa	Known RBP	0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	AADACL3	Q5VUY0	350 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	GLT8D1	Q68CQ7	371 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	LGALS9C	Q6DKI2	356 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243		Q6Q795	121 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	AGTRAP	Q6RW13	159 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	ZNF767P	Q75MW2	155 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	SSX8	Q7RTT4	187 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	SCX	Q7RTU7	201 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	KTN1-AS1	Q86SY8	53 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	BPIFA4P	Q86YQ2	179 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	TEX29	Q8N6K0	151 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	TMEM229B	Q8NBD8	167 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	OR10D4P	Q8NGN7	298 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	H1FX	Q92522	213 aa	Known RBP	0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	TOMM6	Q96B49	74 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	MALSU1	Q96EH3	234 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	ADAT3	Q96EY9	351 aa	Predicted RBP	0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	BORCS8	Q96FH0	119 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	GPX7	Q96SL4	187 aa	Predicted RBP	0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	C12orf57	Q99622	126 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	NAA38	Q9BRA0	125 aa	Known RBP	0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	C2orf88	Q9BSF0	95 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	OR2H1	Q9GZK4	316 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	OR2J1	Q9GZK6	312 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	C16orf95	Q9H693	158 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	FAM60A	Q9NP50	221 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	OTOR	Q9NRC9	128 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	TNFSF18	Q9UNG2	199 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	FUT9	Q9Y231	359 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	HIGD1A	Q9Y241	93 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	MED31	Q9Y3C7	131 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	LINC00588	Q9Y4M8	146 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	ICOS	Q9Y6W8	199 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243		U3KQ87	197 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	MYH10	P35580	1976 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	TAF1L	Q8IZX4	1826 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	DSCAML1	Q8TD84	2053 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	RALGAPA2	Q2PPJ7	1873 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	PLXND1	Q9Y4D7	1925 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	IGKV1OR2-108	A0A075B7D4	117 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	IGHV3-21	A0A0B4J1V1	117 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243		A0A1B0GX51	115 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	DHRS12	A0PJE2	317 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	SDHAF1	A6NFY7	115 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243		H3BMM0	161 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243		J3QQQ9	107 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	TMEM256-PLSCR3	K7ERE1	68 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243		K7ERJ3	54 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243		M0R129	80 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243		M0R378	163 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	AIP	O00170	330 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	OVOL1	O14753	267 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	TAX1BP3	O14907	124 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	UBE2L6	O14933	153 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	LECT2	O14960	151 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	SLC25A20	O43772	301 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	SULT1C4	O75897	302 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	NAPSA	O96009	420 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	SOD1	P00441	154 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	TRGC2	P03986	189 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	SRP19	P09132	144 aa	Known RBP	0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	CXCL1	P09341	107 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	CD7	P09564	240 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	MPC1L	P0DKB6	136 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	CCL3	P10147	92 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	DEFA4	P12838	97 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	RPS4Y1	P22090	263 aa	Known RBP	0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	HIST1H2BO	P23527	126 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	KDELR1	P24390	212 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	HIST1H2BB	P33778	126 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	CSN1S1	P47710	185 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	RBM11	P57052	281 aa	Known RBP	0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	HIST1H2BD	P58876	126 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	TSPEAR-AS2	P59090	65 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	MAX	P61244	160 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	HIST1H2BC	P62807	126 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	EIF3I	Q13347	325 aa	Known RBP	0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	OR8G1	Q15617	311 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	HIST2H2BE	Q16778	126 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	FAM229B	Q4G0N7	80 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	PCOTH	Q58A44	107 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	0.92	□□□□□ -2.26
UBR1-209	ENST00000569243		Q5XG85	94 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	SCIMP	Q6UWF3	145 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	AMTN	Q6UX39	209 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	LCA10	Q71F78	164 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	PDZD9	Q8IXQ8	264 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	OR8I2	Q8N0Y5	310 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	RPP25L	Q8N5L8	163 aa	Known RBP	0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	ZFAND2A	Q8N6M9	145 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	OR51T1	Q8NGJ9	327 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	OR4C16	Q8NGL9	310 aa		0.92	□□□□□ -2.26
UBR1-209	ENST00000569243	WFDC5	Q8TCV5	224 aa		0.92	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms