RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 RNASEH2CQ8TDP1 164 aaKnown RBP8.13□□□□□ -1.11
CDH3-210ENST00000569117 DCUN1D4Q92564 292 aa8.13□□□□□ -1.11
CDH3-210ENST00000569117 THYN1Q9P016 225 aa8.13□□□□□ -1.11
CDH3-210ENST00000569117 FXYD6-FXYD2A0A087WZ82 144 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 IGSF23A1L1A6 192 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 PMS2P5A8MQ11 134 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 SMLR1H3BR10 107 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 OR2J3O76001 311 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 TRGV3P03979 118 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 METTL15P1P0C7V9 234 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 TPPP2P59282 170 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 RHOGP84095 191 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 BAXQ07812 192 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 AWAT1Q58HT5 328 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 SLC25A24Q6NUK1 477 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 STX12Q86Y82 276 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 TMEM252Q8N6L7 170 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 OR5AU1Q8NGC0 362 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 C19orf24Q9BVV8 132 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 ZNF355PQ9NSJ1 428 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 TNFSF18Q9UNG2 199 aa8.12□□□□□ -1.11
CDH3-210ENST00000569117 RPS10-NUDT3A0A1W2PQS6 291 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 FAM24AA6NFZ4 105 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 I3L2K1 104 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 K7EIM0 57 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 C1QBP02746 253 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 IFNA4P05014 189 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 H2AFB1P0C5Y9 115 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 MALP21145 153 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 OPRK1P41145 380 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 SULT1A1P50225 295 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 RAB9AP51151 201 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 DEFA5Q01523 94 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 EWSR1Q01844 656 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDH3-210ENST00000569117 CD69Q07108 199 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 CD300CQ08708 224 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 C15orf32Q32M92 178 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 TCTEX1D4Q5JR98 221 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 TMEM65Q6PI78 240 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 ETV3LQ6ZN32 361 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 HAPLN4Q86UW8 402 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 VN1R17PQ8TDU5 208 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 TMEM158Q8WZ71 300 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 USMG5Q96IX5 58 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 MS4A10Q96PG2 267 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 AQP10Q96PS8 301 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 SLC25A31Q9H0C2 315 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 KLK15Q9H2R5 256 aa8.11□□□□□ -1.11
CDH3-210ENST00000569117 PAIP2BQ9ULR5 123 aaKnown RBP8.11□□□□□ -1.11
CDH3-210ENST00000569117 A0A0G2JLM5 398 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 RNF222A6NCQ9 220 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 MFSD2BA6NFX1 497 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 HMSDA8MTL9 139 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 NUDT19A8MXV4 375 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 CST7O76096 145 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 NDUFB8O95169 186 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 MT-CO2P00403 227 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 RPL12P30050 165 aaKnown RBP8.1□□□□□ -1.11
CDH3-210ENST00000569117 RIPPLY3P57055 190 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 HBG1P69891 147 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 HBG2P69892 147 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 KHDC1LQ5JSQ8 128 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 LCNL1Q6ZST4 164 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 ACOT7LQ6ZUV0 252 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 SLC16A13Q7RTY0 426 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 OR11H4Q8NGC9 324 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 OR10P1Q8NGE3 313 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 PINX1Q96BK5 328 aaKnown RBP8.1□□□□□ -1.11
CDH3-210ENST00000569117 CXorf58Q96LI9 332 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 FNDC4Q9H6D8 234 aaPredicted RBP8.1□□□□□ -1.11
CDH3-210ENST00000569117 HSPB11Q9Y547 144 aa8.1□□□□□ -1.11
CDH3-210ENST00000569117 FNDC10F2Z333 226 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 ARPC5O15511 151 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 PFDN1O60925 122 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 CD28P10747 220 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 FCGR2BP31994 310 aaPredicted RBP8.09□□□□□ -1.11
CDH3-210ENST00000569117 GPX4P36969 197 aaPredicted RBP8.09□□□□□ -1.11
CDH3-210ENST00000569117 DLK1P80370 383 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 ATP5G2Q06055 141 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 SLC38A11Q08AI6 406 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 ARL16Q0P5N6 197 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 KIAA0141Q14154 515 aaPredicted RBP8.09□□□□□ -1.11
CDH3-210ENST00000569117 ZNF345Q14585 488 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 ZFP69Q49AA0 526 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 OR8G2PQ6IF36 304 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 ETFRF1Q6IPR1 90 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 ZNF546Q86UE3 836 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 ZNF491Q8N8L2 437 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 INO80EQ8NBZ0 244 aaPredicted RBP8.09□□□□□ -1.11
CDH3-210ENST00000569117 SCARB1Q8WTV0 552 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 CACNG8Q8WXS5 425 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 EEF1AKMT3Q96AZ1 226 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 UBE2E2Q96LR5 201 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 ATP6V0BQ99437 205 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 GGACTQ9BVM4 153 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 C19orf73Q9NVV2 129 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 C21orf62Q9NYP8 219 aa8.09□□□□□ -1.11
CDH3-210ENST00000569117 FBN1P35555 2871 aaKnown RBP8.09□□□□□ -1.11
CDH3-210ENST00000569117 TENM1Q9UKZ4 2725 aa8.08□□□□□ -1.12
CDH3-210ENST00000569117 TRBV7-1A0A0A6YYK4 115 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms