RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 C1QBP02746 253 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 GPX1P07203 203 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 HTR1AP08908 422 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 TRGC1P0CF51 173 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 DEFA4P12838 97 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 GPX2P18283 190 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 AQP4P55087 323 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 YPEL3P61236 119 aaPredicted RBP0.66□□□□□ -2.3
BBS4-215ENST00000569001 SLC38A11Q08AI6 406 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 ZNF345Q14585 488 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 ELOBQ15370 118 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 LINC01554Q52M75 96 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 DHRS4L2Q6PKH6 230 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 Q6Q795 121 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 C7orf65Q6ZTY9 151 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 SLC36A1Q7Z2H8 476 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 COA5Q86WW8 74 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 LRRC28Q86X40 367 aaPredicted RBP0.66□□□□□ -2.3
BBS4-215ENST00000569001 ZNF439Q8NDP4 499 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 PXT1Q8NFP0 134 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 OR11H6Q8NGC7 330 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 OR8B3Q8NGG8 313 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 OR4D11Q8NGI4 311 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 OR10X1Q8NGY0 326 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 ZNF563Q8TA94 476 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 TMEM106AQ96A25 262 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 GPR146Q96CH1 333 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 SIGMAR1Q99720 223 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 KIFC1Q9BW19 673 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 YIPF3Q9GZM5 350 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 CCDC90BQ9GZT6 254 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 TMEM133Q9H2Q1 129 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 C14orf105Q9NVL8 296 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 ARMC1Q9NVT9 282 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 TVP23BQ9NYZ1 205 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 ERGIC3Q9Y282 383 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 KIF24Q5T7B8 1368 aa0.66□□□□□ -2.3
BBS4-215ENST00000569001 MED1Q15648 1581 aaPredicted RBP0.66□□□□□ -2.3
BBS4-215ENST00000569001 RGS12O14924 1447 aa0.65□□□□□ -2.3
BBS4-215ENST00000569001 FREM1Q5H8C1 2179 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 TRBV19A0A075B6N1 114 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 hCG_1818297A0A087WSY0 165 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 A0A0D9SG52 128 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 A8MT66 165 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 SDCBPO00560 298 aaPredicted RBP0.65□□□□□ -2.31
BBS4-215ENST00000569001 MRPS14O60783 128 aaKnown RBP0.65□□□□□ -2.31
BBS4-215ENST00000569001 CTSDP07339 412 aaPredicted RBP0.65□□□□□ -2.31
BBS4-215ENST00000569001 RPSAP08865 295 aaKnown RBP0.65□□□□□ -2.31
BBS4-215ENST00000569001 MIFP14174 115 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 KRTAP10-4P60372 401 aaPredicted RBP0.65□□□□□ -2.31
BBS4-215ENST00000569001 HSPE1P61604 102 aaKnown RBP0.65□□□□□ -2.31
BBS4-215ENST00000569001 NNATQ16517 81 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 TMEM155Q4W5P6 130 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 LCA10Q71F78 164 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 TRAPPC6BQ86SZ2 158 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 HIST3H2BBQ8N257 126 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 DEFB119Q8N690 84 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 SIGLECL1Q8N7X8 197 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 GNPDA2Q8TDQ7 276 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 ZNF625Q96I27 306 aaPredicted RBP0.65□□□□□ -2.31
BBS4-215ENST00000569001 RNASE7Q9H1E1 156 aaKnown RBP0.65□□□□□ -2.31
BBS4-215ENST00000569001 CST9LQ9H4G1 147 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 SLC39A9Q9NUM3 307 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 UQCC1Q9NVA1 299 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 MED9Q9NWA0 146 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 EPDR1Q9UM22 224 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 CYSLTR1Q9Y271 337 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 SOX21Q9Y651 276 aaPredicted RBP0.65□□□□□ -2.31
BBS4-215ENST00000569001 MYH7BA7E2Y1 1941 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 CCDC88AQ3V6T2 1871 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 PCDH15Q96QU1 1955 aa0.65□□□□□ -2.31
BBS4-215ENST00000569001 ARHGEF28Q8N1W1 1705 aaKnown RBP0.64□□□□□ -2.31
BBS4-215ENST00000569001 SDK1Q7Z5N4 2213 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 TRGV2A0A075B6R0 118 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 FUOMA2VDF0 154 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 TMEM212A6NML5 194 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 ORC5O43913 435 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 PMP2P02689 132 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 MAGEA12P43365 314 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 SPANXN5Q5MJ07 72 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 FAM173BQ6P4H8 233 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 LCN15Q6UWW0 184 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 UNQ6190/PRO20217Q6UXQ8 127 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 Q6ZQT0 140 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 GOLT1AQ6ZVE7 132 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 FP248Q71RG6 208 aaPredicted RBP0.64□□□□□ -2.31
BBS4-215ENST00000569001 ADAT3Q96EY9 351 aaPredicted RBP0.64□□□□□ -2.31
BBS4-215ENST00000569001 NAA38Q9BRA0 125 aaKnown RBP0.64□□□□□ -2.31
BBS4-215ENST00000569001 IMUPQ9GZP8 106 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 NHP2Q9NX24 153 aaKnown RBP0.64□□□□□ -2.31
BBS4-215ENST00000569001 OBSL1O75147 1896 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 SCN10AQ9Y5Y9 1956 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 BAZ2BQ9UIF8 2168 aaKnown RBP0.64□□□□□ -2.31
BBS4-215ENST00000569001 MICAL3Q7RTP6 2002 aa0.64□□□□□ -2.31
BBS4-215ENST00000569001 ZCCHC11Q5TAX3 1644 aaKnown RBP0.64□□□□□ -2.31
BBS4-215ENST00000569001 RP1P56715 2156 aa0.63□□□□□ -2.31
BBS4-215ENST00000569001 HEATR5BQ9P2D3 2071 aa0.63□□□□□ -2.31
BBS4-215ENST00000569001 ROCK1Q13464 1354 aa0.63□□□□□ -2.31
BBS4-215ENST00000569001 A0A087X0T9 212 aa0.63□□□□□ -2.31
BBS4-215ENST00000569001 IGKV1-9A0A0C4DH69 117 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms