RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 A0A1B0GU03 582 aa11.37□□□□□ -0.59
HERPUD1-215ENST00000568676 PRSS3P35030 304 aa11.37□□□□□ -0.59
HERPUD1-215ENST00000568676 AP2S1P53680 142 aaPredicted RBP11.37□□□□□ -0.59
HERPUD1-215ENST00000568676 UCP3P55916 312 aa11.37□□□□□ -0.59
HERPUD1-215ENST00000568676 TSPAN5P62079 268 aa11.37□□□□□ -0.59
HERPUD1-215ENST00000568676 LGALS9BQ3B8N2 356 aa11.37□□□□□ -0.59
HERPUD1-215ENST00000568676 PHLDA2Q53GA4 152 aa11.37□□□□□ -0.59
HERPUD1-215ENST00000568676 CSNK1G2-AS1Q8NCQ2 148 aa11.37□□□□□ -0.59
HERPUD1-215ENST00000568676 DCANP1Q8TF63 244 aa11.37□□□□□ -0.59
HERPUD1-215ENST00000568676 TRAV30A0A087WSZ9 112 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 A0A087WXM4 84 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 HELTA6NFD8 242 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 CLN5O75503 358 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 ATG12O94817 140 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 ZNF688P0C7X2 276 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 C4BPBP20851 252 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 HRH1P35367 487 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 P2RY1P47900 373 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 TAS2R20P59543 309 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 SLC35G3Q8N808 338 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 MRGPRFQ96AM1 343 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 RNF167Q9H6Y7 350 aa11.36□□□□□ -0.59
HERPUD1-215ENST00000568676 FAT2Q9NYQ8 4349 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 IGKV1-39P01597 117 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 IGKV1D-39P04432 117 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 RPL5P46777 297 aaKnown RBP11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 NEDD8Q15843 81 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 ACTL10Q5JWF8 245 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 LYSMD2Q8IV50 215 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 OR4X1Q8NH49 305 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 TMEM230Q96A57 120 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 FAM210BQ96KR6 192 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 PDCD10Q9BUL8 212 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 SEPSECSQ9HD40 501 aaKnown RBP11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 PKHD1P08F94 4074 aa11.35□□□□□ -0.59
HERPUD1-215ENST00000568676 KNCNA6PVL3 124 aa11.34□□□□□ -0.59
HERPUD1-215ENST00000568676 RTL8CO15255 209 aa11.34□□□□□ -0.59
HERPUD1-215ENST00000568676 ZNF486Q96H40 463 aaPredicted RBP11.34□□□□□ -0.59
HERPUD1-215ENST00000568676 TMEM189A5PLL7 270 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 IFNA17P01571 189 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 HLA-DMAP28067 261 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 OPRK1P41145 380 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 SNRPD3P62318 126 aaKnown RBP11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 SOHLH1Q5JUK2 328 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 SAMD12Q8N8I0 201 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 RAB40CQ96S21 281 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 SCPEP1Q9HB40 452 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 ENY2Q9NPA8 101 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 CELA1Q9UNI1 258 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 DNAH2Q9P225 4427 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 RYR1P21817 5038 aa11.33□□□□□ -0.6
HERPUD1-215ENST00000568676 TEX48A0A1B0GUV7 120 aa11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 RPS10-NUDT3A0A1W2PQS6 291 aa11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 IFNA10P01566 189 aa11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 IFNA21P01568 189 aa11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 RNASE2P10153 161 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 AKR1C2P52895 323 aa11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 RND3P61587 244 aa11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 DHRS2Q13268 280 aa11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 GPX8Q8TED1 209 aa11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 NEU1Q99519 415 aa11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 CLEC5AQ9NY25 188 aa11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 U3KQE9 123 aa11.32□□□□□ -0.6
HERPUD1-215ENST00000568676 SMIM9A6NGZ8 99 aa11.31□□□□□ -0.6
HERPUD1-215ENST00000568676 P0C879 139 aa11.31□□□□□ -0.6
HERPUD1-215ENST00000568676 SPART-AS1P0CW21 52 aa11.31□□□□□ -0.6
HERPUD1-215ENST00000568676 RCVRNP35243 200 aa11.31□□□□□ -0.6
HERPUD1-215ENST00000568676 HOXA1P49639 335 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-215ENST00000568676 SPINK9Q5DT21 86 aa11.31□□□□□ -0.6
HERPUD1-215ENST00000568676 PSMG4Q5JS54 123 aa11.31□□□□□ -0.6
HERPUD1-215ENST00000568676 A0A0B4J293 547 aa11.3□□□□□ -0.6
HERPUD1-215ENST00000568676 SMIM31A0A1B0GVY4 71 aa11.3□□□□□ -0.6
HERPUD1-215ENST00000568676 IGKV1-17P01599 117 aa11.3□□□□□ -0.6
HERPUD1-215ENST00000568676 CD74P04233 296 aa11.3□□□□□ -0.6
HERPUD1-215ENST00000568676 HNRNPCP07910 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
HERPUD1-215ENST00000568676 PPP5CP53041 499 aa11.3□□□□□ -0.6
HERPUD1-215ENST00000568676 BSXQ3C1V8 233 aa11.3□□□□□ -0.6
HERPUD1-215ENST00000568676 C16orf54Q6UWD8 224 aa11.3□□□□□ -0.6
HERPUD1-215ENST00000568676 OR1S2Q8NGQ3 325 aa11.3□□□□□ -0.6
HERPUD1-215ENST00000568676 Q8WTZ3 238 aa11.3□□□□□ -0.6
HERPUD1-215ENST00000568676 FNDC4Q9H6D8 234 aaPredicted RBP11.3□□□□□ -0.6
HERPUD1-215ENST00000568676 M0R2N4 97 aa11.29□□□□□ -0.6
HERPUD1-215ENST00000568676 GSTZ1O43708 216 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-215ENST00000568676 B3GALNT1O75752 331 aa11.29□□□□□ -0.6
HERPUD1-215ENST00000568676 IGKV1-5P01602 117 aa11.29□□□□□ -0.6
HERPUD1-215ENST00000568676 SLC25A4P12235 298 aa11.29□□□□□ -0.6
HERPUD1-215ENST00000568676 YPEL3P61236 119 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-215ENST00000568676 RNF212Q495C1 297 aa11.29□□□□□ -0.6
HERPUD1-215ENST00000568676 ZNF705AQ6ZN79 300 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-215ENST00000568676 UBE2DNLQ8IWF7 75 aa11.29□□□□□ -0.6
HERPUD1-215ENST00000568676 GLMPQ8WWB7 406 aa11.29□□□□□ -0.6
HERPUD1-215ENST00000568676 NRN1Q9NPD7 142 aa11.29□□□□□ -0.6
HERPUD1-215ENST00000568676 AGRNO00468 2067 aa11.28□□□□□ -0.6
HERPUD1-215ENST00000568676 FAM90A26D6RGX4 464 aa11.28□□□□□ -0.6
HERPUD1-215ENST00000568676 H3BMM0 161 aa11.28□□□□□ -0.6
HERPUD1-215ENST00000568676 PGAM2P15259 253 aa11.28□□□□□ -0.6
HERPUD1-215ENST00000568676 ETV6P41212 452 aa11.28□□□□□ -0.6
HERPUD1-215ENST00000568676 HTR2BP41595 481 aa11.28□□□□□ -0.6
HERPUD1-215ENST00000568676 IZUMO4Q1ZYL8 232 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms