RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 ZNF207O43670 478 aaKnown RBP21.92■■□□□ 1.1
RAB40C-211ENST00000568586 TMEM50AO95807 157 aa21.92■■□□□ 1.1
RAB40C-211ENST00000568586 AP3S2P59780 193 aa21.92■■□□□ 1.1
RAB40C-211ENST00000568586 FNDC4Q9H6D8 234 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-211ENST00000568586 CHEK1O14757 476 aa21.91■■□□□ 1.1
RAB40C-211ENST00000568586 S100A5P33763 92 aa21.91■■□□□ 1.1
RAB40C-211ENST00000568586 FAUP35544 74 aaKnown RBP21.91■■□□□ 1.1
RAB40C-211ENST00000568586 HTR2BP41595 481 aa21.91■■□□□ 1.1
RAB40C-211ENST00000568586 PYDC2Q56P42 97 aa21.91■■□□□ 1.1
RAB40C-211ENST00000568586 CASC10Q5T4H9 136 aa21.91■■□□□ 1.1
RAB40C-211ENST00000568586 FAM110AQ9BQ89 295 aa21.91■■□□□ 1.1
RAB40C-211ENST00000568586 NMSQ5H8A3 153 aa21.9■■□□□ 1.1
RAB40C-211ENST00000568586 TOMM20LQ6UXN7 152 aa21.9■■□□□ 1.1
RAB40C-211ENST00000568586 TMEM116Q8NCL8 245 aa21.9■■□□□ 1.1
RAB40C-211ENST00000568586 RHPN1-AS1Q9BWJ2 59 aa21.9■■□□□ 1.1
RAB40C-211ENST00000568586 DYNC2H1Q8NCM8 4307 aaKnown RBP21.89■■□□□ 1.1
RAB40C-211ENST00000568586 TRAV14DV4A0A0A6YYC5 116 aa21.89■■□□□ 1.09
RAB40C-211ENST00000568586 A0A0B4J2A0 478 aa21.89■■□□□ 1.09
RAB40C-211ENST00000568586 YIF1AO95070 293 aa21.89■■□□□ 1.09
RAB40C-211ENST00000568586 TOMM5Q8N4H5 51 aa21.89■■□□□ 1.09
RAB40C-211ENST00000568586 OR4X1Q8NH49 305 aa21.89■■□□□ 1.09
RAB40C-211ENST00000568586 SHPKQ9UHJ6 478 aa21.89■■□□□ 1.09
RAB40C-211ENST00000568586 C2orf83Q53S99 150 aa21.88■■□□□ 1.09
RAB40C-211ENST00000568586 ZNF600Q6ZNG1 722 aa21.88■■□□□ 1.09
RAB40C-211ENST00000568586 RNF2Q99496 336 aa21.88■■□□□ 1.09
RAB40C-211ENST00000568586 ZFAND3Q9H8U3 227 aa21.88■■□□□ 1.09
RAB40C-211ENST00000568586 MRPL36Q9P0J6 103 aaKnown RBP21.88■■□□□ 1.09
RAB40C-211ENST00000568586 CLN5O75503 358 aa21.87■■□□□ 1.09
RAB40C-211ENST00000568586 SULT1A3P0DMM9 295 aa21.87■■□□□ 1.09
RAB40C-211ENST00000568586 SULT1A4P0DMN0 295 aa21.87■■□□□ 1.09
RAB40C-211ENST00000568586 AKR1C4P17516 323 aa21.87■■□□□ 1.09
RAB40C-211ENST00000568586 FAM90A2PQ658T7 463 aa21.87■■□□□ 1.09
RAB40C-211ENST00000568586 GINS3Q9BRX5 216 aa21.87■■□□□ 1.09
RAB40C-211ENST00000568586 GGTLC1Q9BX51 225 aa21.87■■□□□ 1.09
RAB40C-211ENST00000568586 HEYLQ9NQ87 328 aaPredicted RBP21.87■■□□□ 1.09
RAB40C-211ENST00000568586 PRR13Q9NZ81 148 aa21.87■■□□□ 1.09
RAB40C-211ENST00000568586 OR4C46A6NHA9 309 aa21.86■■□□□ 1.09
RAB40C-211ENST00000568586 LYL1P12980 280 aa21.86■■□□□ 1.09
RAB40C-211ENST00000568586 SRPXP78539 464 aa21.86■■□□□ 1.09
RAB40C-211ENST00000568586 MLANAQ16655 118 aa21.86■■□□□ 1.09
RAB40C-211ENST00000568586 ODF3L2Q3SX64 289 aa21.86■■□□□ 1.09
RAB40C-211ENST00000568586 VSIRQ9H7M9 311 aa21.86■■□□□ 1.09
RAB40C-211ENST00000568586 RETNQ9HD89 108 aa21.86■■□□□ 1.09
RAB40C-211ENST00000568586 LOC102724200A0A096LPH7 203 aaPredicted RBP21.85■■□□□ 1.09
RAB40C-211ENST00000568586 ANXA3P12429 323 aa21.85■■□□□ 1.09
RAB40C-211ENST00000568586 OPRK1P41145 380 aa21.85■■□□□ 1.09
RAB40C-211ENST00000568586 CCR6P51684 374 aa21.85■■□□□ 1.09
RAB40C-211ENST00000568586 LGI3Q8N145 548 aa21.85■■□□□ 1.09
RAB40C-211ENST00000568586 RNASEH2CQ8TDP1 164 aaKnown RBP21.85■■□□□ 1.09
RAB40C-211ENST00000568586 TMEM170AQ8WVE7 144 aa21.85■■□□□ 1.09
RAB40C-211ENST00000568586 SLC25A21Q9BQT8 299 aaPredicted RBP21.85■■□□□ 1.09
RAB40C-211ENST00000568586 PUS1Q9Y606 427 aaKnown RBP eCLIP21.85■■□□□ 1.09
RAB40C-211ENST00000568586 STARD9Q9P2P6 4700 aa21.85■■□□□ 1.09
RAB40C-211ENST00000568586 PIGBOS1A0A0B4J2F0 54 aa21.84■■□□□ 1.09
RAB40C-211ENST00000568586 A0A1B0GU03 582 aa21.84■■□□□ 1.09
RAB40C-211ENST00000568586 CD5P06127 495 aa21.84■■□□□ 1.09
RAB40C-211ENST00000568586 TMEM128Q5BJH2 165 aa21.84■■□□□ 1.09
RAB40C-211ENST00000568586 LYZL2Q7Z4W2 148 aa21.84■■□□□ 1.09
RAB40C-211ENST00000568586 HSPB7Q9UBY9 170 aa21.84■■□□□ 1.09
RAB40C-211ENST00000568586 CEBPZOSA8MTT3 80 aa21.83■■□□□ 1.09
RAB40C-211ENST00000568586 IGKV1-17P01599 117 aa21.83■■□□□ 1.09
RAB40C-211ENST00000568586 SLC24A4Q8NFF2 622 aa21.83■■□□□ 1.09
RAB40C-211ENST00000568586 SRRQ9GZT4 340 aa21.83■■□□□ 1.09
RAB40C-211ENST00000568586 TRAV30A0A087WSZ9 112 aa21.82■■□□□ 1.08
RAB40C-211ENST00000568586 RPS10-NUDT3A0A1W2PQS6 291 aa21.82■■□□□ 1.08
RAB40C-211ENST00000568586 TNFRSF9Q07011 255 aa21.82■■□□□ 1.08
RAB40C-211ENST00000568586 SMCO1Q147U7 214 aa21.82■■□□□ 1.08
RAB40C-211ENST00000568586 SPANXN2Q5MJ10 180 aa21.82■■□□□ 1.08
RAB40C-211ENST00000568586 LRTM2Q8N967 370 aa21.82■■□□□ 1.08
RAB40C-211ENST00000568586 IGHV3-49A0A0A0MS15 119 aa21.81■■□□□ 1.08
RAB40C-211ENST00000568586 DUXBA0A1W2PPF3 345 aa21.81■■□□□ 1.08
RAB40C-211ENST00000568586 SLC25A4P12235 298 aa21.81■■□□□ 1.08
RAB40C-211ENST00000568586 BMI1P35226 326 aa21.81■■□□□ 1.08
RAB40C-211ENST00000568586 NOXA1Q86UR1 476 aa21.81■■□□□ 1.08
RAB40C-211ENST00000568586 TENM2Q9NT68 2774 aa21.81■■□□□ 1.08
RAB40C-211ENST00000568586 PRSS54Q6PEW0 395 aa21.8■■□□□ 1.08
RAB40C-211ENST00000568586 UBQLN2Q9UHD9 624 aa21.8■■□□□ 1.08
RAB40C-211ENST00000568586 SCGB2A1O75556 95 aa21.79■■□□□ 1.08
RAB40C-211ENST00000568586 APOHP02749 345 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-211ENST00000568586 CMC4P56277 68 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-211ENST00000568586 TMED4Q7Z7H5 227 aa21.79■■□□□ 1.08
RAB40C-211ENST00000568586 LILRB2Q8N423 598 aa21.79■■□□□ 1.08
RAB40C-211ENST00000568586 ST8SIA2Q92186 375 aa21.79■■□□□ 1.08
RAB40C-211ENST00000568586 U3KQ87 197 aa21.79■■□□□ 1.08
RAB40C-211ENST00000568586 IGHV3OR16-13A0A075B7E8 117 aa21.78■■□□□ 1.08
RAB40C-211ENST00000568586 IGHV3-74A0A0B4J1X5 117 aa21.78■■□□□ 1.08
RAB40C-211ENST00000568586 PITX3O75364 302 aa21.78■■□□□ 1.08
RAB40C-211ENST00000568586 IGLC1P0CG04 106 aa21.78■■□□□ 1.08
RAB40C-211ENST00000568586 NPY1RP25929 384 aa21.78■■□□□ 1.08
RAB40C-211ENST00000568586 OVOL2Q9BRP0 275 aa21.78■■□□□ 1.08
RAB40C-211ENST00000568586 KIR2DL5BA0A0G2JN68 375 aa21.77■■□□□ 1.08
RAB40C-211ENST00000568586 KIR2DL5BA0A0G2JPC4 375 aa21.77■■□□□ 1.08
RAB40C-211ENST00000568586 CRYBB3P26998 211 aa21.77■■□□□ 1.08
RAB40C-211ENST00000568586 ATP5IP56385 69 aaPredicted RBP21.77■■□□□ 1.08
RAB40C-211ENST00000568586 TCF24Q7RTU0 167 aa21.77■■□□□ 1.08
RAB40C-211ENST00000568586 KIR2DL5AQ8N109 375 aa21.77■■□□□ 1.08
RAB40C-211ENST00000568586 OR1S2Q8NGQ3 325 aa21.77■■□□□ 1.08
RAB40C-211ENST00000568586 KIR2DL5BQ8NHK3 375 aa21.77■■□□□ 1.08
RAB40C-211ENST00000568586 TRAV2A0A0B4J234 112 aa21.76■■□□□ 1.07
RAB40C-211ENST00000568586 SLC25A6P12236 298 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms