RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 TMEM190Q8WZ59 177 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 GALNT14Q96FL9 552 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 SCGB3A2Q96PL1 93 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 TUBA4BQ9H853 241 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 RETNQ9HD89 108 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 C19orf73Q9NVV2 129 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 UFC1Q9Y3C8 167 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 A0A1B0GU03 582 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 A8MWP6 167 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 NUPL2O15504 423 aaKnown RBP7.12□□□□□ -1.27
SF3B3-211ENST00000568291 GNG7O60262 68 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 B3GALNT1O75752 331 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 APOHP02749 345 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-211ENST00000568291 C8orf88P0DMB2 117 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 SULT1A3P0DMM9 295 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 SULT1A4P0DMN0 295 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 OPRK1P41145 380 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 TFPI2P48307 235 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 NMSQ5H8A3 153 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 SPSB3Q6PJ21 355 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 RBPMS2Q6ZRY4 209 aaKnown RBP7.12□□□□□ -1.27
SF3B3-211ENST00000568291 GTSCR1Q86UQ5 136 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 LGI3Q8N145 548 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 LILRB2Q8N423 598 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 RBKSQ9H477 322 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 TECRQ9NZ01 308 aaKnown RBP7.12□□□□□ -1.27
SF3B3-211ENST00000568291 UBQLN2Q9UHD9 624 aa7.12□□□□□ -1.27
SF3B3-211ENST00000568291 A0A0B4J2A0 478 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 RBMY1BA6NDE4 496 aaKnown RBP7.11□□□□□ -1.27
SF3B3-211ENST00000568291 RBMY1EA6NEQ0 496 aaKnown RBP7.11□□□□□ -1.27
SF3B3-211ENST00000568291 OR11H12B2RN74 326 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 NDUFA4O00483 81 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 TMEM50AO95807 157 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 HOXB5P09067 269 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 RBMY1DP0C7P1 496 aaKnown RBP7.11□□□□□ -1.27
SF3B3-211ENST00000568291 IAPPP10997 89 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 IL7P13232 177 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 ANXA7P20073 488 aaKnown RBP7.11□□□□□ -1.27
SF3B3-211ENST00000568291 BTCP35070 178 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 SUB1P53999 127 aaKnown RBP eCLIP7.11□□□□□ -1.271e-12■□□□□ 10.1
SF3B3-211ENST00000568291 SMCO1Q147U7 214 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 HAGHQ16775 308 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 TIGITQ495A1 244 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 TMEM128Q5BJH2 165 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 PVRIGQ6DKI7 326 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 TOMM20LQ6UXN7 152 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 CENPSQ8N2Z9 138 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 GBGT1Q8N5D6 347 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 DUSP18Q8NEJ0 188 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 OR52B4Q8NGK2 314 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 OR1S1Q8NH92 325 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 RNF2Q99496 336 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 FAM110AQ9BQ89 295 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 MAGT1Q9H0U3 335 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 SRD5A3Q9H8P0 318 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 EDA2RQ9HAV5 297 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 DAZ1Q9NQZ3 744 aaKnown RBP7.11□□□□□ -1.27
SF3B3-211ENST00000568291 MRPL27Q9P0M9 148 aaKnown RBP7.11□□□□□ -1.27
SF3B3-211ENST00000568291 SHPKQ9UHJ6 478 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 SMPXQ9UHP9 88 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 STARD9Q9P2P6 4700 aa7.11□□□□□ -1.27
SF3B3-211ENST00000568291 CSMD3Q7Z407 3707 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 MPTX1A8MV57 137 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 INS-IGF2F8WCM5 200 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 PLA2G10O15496 165 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 ADAP1O75689 374 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 SFT2D2O95562 160 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 IFNA10P01566 189 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 ANXA3P12429 323 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 RND2P52198 227 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 UBE2MP61081 183 aaKnown RBP7.1□□□□□ -1.27
SF3B3-211ENST00000568291 TNFRSF9Q07011 255 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 ZNF124Q15973 351 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 BSXQ3C1V8 233 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 AARDQ4LEZ3 155 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 GSG1LQ6UXU4 331 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 WFDC3Q8IUB2 231 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 TMEM116Q8NCL8 245 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 OR2K2Q8NGT1 345 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 OR52E5Q8NH55 327 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 IL22RA2Q969J5 263 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 TXN2Q99757 166 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 SLC25A21Q9BQT8 299 aaPredicted RBP7.1□□□□□ -1.27
SF3B3-211ENST00000568291 SPATA25Q9BR10 227 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 RHPN1-AS1Q9BWJ2 59 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 PGPEP1Q9NXJ5 209 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 NDUFA13Q9P0J0 144 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 PAIP2BQ9ULR5 123 aaKnown RBP7.1□□□□□ -1.27
SF3B3-211ENST00000568291 PUS1Q9Y606 427 aaKnown RBP eCLIP7.1□□□□□ -1.27
SF3B3-211ENST00000568291 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
SF3B3-211ENST00000568291 TRAV14DV4A0A0A6YYC5 116 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 IGHV7-4-1A0A0J9YVY3 117 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 C9orf170A2RU37 121 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 A8MZ25 164 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 CHEK1O14757 476 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 NDUFB6O95139 128 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 HTR2BP41595 481 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 NPBWR1P48145 328 aa7.09□□□□□ -1.27
SF3B3-211ENST00000568291 ELLP55199 621 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-211ENST00000568291 RELQ04864 619 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms