RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 HLA-DRB5Q30154 266 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 FFAR4Q5NUL3 377 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 COL5A1-AS1Q5SY13 56 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 TRAPPC1Q9Y5R8 145 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 UBR5O95071 2799 aaPredicted RBP18.81■□□□□ 0.6
LINC00543-201ENST00000567234 DOPEY1Q5JWR5 2465 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 INS-IGF2F8WCM5 200 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 IGKV1D-33P01593 117 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 IGKV1-33P01594 117 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 LIPFP07098 398 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 BRS3P32247 399 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 DIAPH2-AS1Q14236 149 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 Q8N7P7 452 aa18.81■□□□□ 0.6
LINC00543-201ENST00000567234 RPUSD4Q96CM3 377 aaKnown RBP18.81■□□□□ 0.6
LINC00543-201ENST00000567234 HRNRQ86YZ3 2850 aaPredicted RBP18.8■□□□□ 0.6
LINC00543-201ENST00000567234 RPL8P62917 257 aaKnown RBP18.8■□□□□ 0.6
LINC00543-201ENST00000567234 SRSF1Q07955 248 aaKnown RBP eCLIP18.8■□□□□ 0.6
LINC00543-201ENST00000567234 TREML4Q6UXN2 200 aa18.8■□□□□ 0.6
LINC00543-201ENST00000567234 OR10G9Q8NGN4 311 aa18.8■□□□□ 0.6
LINC00543-201ENST00000567234 OR10G7Q8NGN6 311 aa18.8■□□□□ 0.6
LINC00543-201ENST00000567234 TBX15Q96SF7 602 aa18.8■□□□□ 0.6
LINC00543-201ENST00000567234 PATZ1Q9HBE1 687 aaKnown RBP18.8■□□□□ 0.6
LINC00543-201ENST00000567234 NPVFQ9HCQ7 196 aa18.8■□□□□ 0.6
LINC00543-201ENST00000567234 ZFP30Q9Y2G7 519 aa18.8■□□□□ 0.6
LINC00543-201ENST00000567234 F6UZH7 168 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 LY6HO94772 140 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 CA2P00918 260 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 RPL29P47914 159 aaKnown RBP18.79■□□□□ 0.6
LINC00543-201ENST00000567234 LGALS7P47929 136 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 NECAP1Q8NC96 275 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 OR1L8Q8NGR8 309 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 LPAR2Q9HBW0 351 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 AMMECR1Q9Y4X0 333 aaPredicted RBP18.79■□□□□ 0.6
LINC00543-201ENST00000567234 COL12A1Q99715 3063 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 A0A1W2PPR1 153 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 IGFBP2P18065 325 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 OPRK1P41145 380 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 ZNF705AQ6ZN79 300 aaPredicted RBP18.79■□□□□ 0.6
LINC00543-201ENST00000567234 CMTM2Q8TAZ6 248 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 HINT2Q9BX68 163 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 COMMD5Q9GZQ3 224 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 NDUFA4L2Q9NRX3 87 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 KCNIP2Q9NS61 270 aa18.79■□□□□ 0.6
LINC00543-201ENST00000567234 BUB1B-PAK6H3BSN5 160 aa18.78■□□□□ 0.6
LINC00543-201ENST00000567234 IGLV2-23P01705 113 aa18.78■□□□□ 0.6
LINC00543-201ENST00000567234 MYOD1P15172 320 aa18.78■□□□□ 0.6
LINC00543-201ENST00000567234 PCP4P48539 62 aa18.78■□□□□ 0.6
LINC00543-201ENST00000567234 C2orf83Q53S99 150 aa18.78■□□□□ 0.6
LINC00543-201ENST00000567234 ELOVL1Q9BW60 279 aa18.78■□□□□ 0.6
LINC00543-201ENST00000567234 LSM4Q9Y4Z0 139 aaKnown RBP18.78■□□□□ 0.6
LINC00543-201ENST00000567234 SPTAN1Q13813 2472 aaKnown RBP18.77■□□□□ 0.6
LINC00543-201ENST00000567234 ZNF705FA8MVS1 300 aaPredicted RBP18.77■□□□□ 0.6
LINC00543-201ENST00000567234 ZNF705DP0CH99 300 aaPredicted RBP18.77■□□□□ 0.6
LINC00543-201ENST00000567234 ZNF705BP0CI00 300 aaPredicted RBP18.77■□□□□ 0.6
LINC00543-201ENST00000567234 VMA21Q3ZAQ7 101 aa18.77■□□□□ 0.6
LINC00543-201ENST00000567234 OR4B1Q8NGF8 309 aa18.77■□□□□ 0.6
LINC00543-201ENST00000567234 OR4F5Q8NH21 305 aa18.77■□□□□ 0.6
LINC00543-201ENST00000567234 OR4F4Q96R69 305 aa18.77■□□□□ 0.6
LINC00543-201ENST00000567234 A6NNC1 897 aa18.77■□□□□ 0.59
LINC00543-201ENST00000567234 A0A1W2PN81 502 aa18.76■□□□□ 0.59
LINC00543-201ENST00000567234 CHRNA7P36544 502 aa18.76■□□□□ 0.59
LINC00543-201ENST00000567234 ARSJQ5FYB0 599 aaPredicted RBP18.76■□□□□ 0.59
LINC00543-201ENST00000567234 TPTE2P1Q5T6R2 138 aa18.76■□□□□ 0.59
LINC00543-201ENST00000567234 TRBV9A0A0B4J1U6 114 aa18.75■□□□□ 0.59
LINC00543-201ENST00000567234 C22orf46C9J442 243 aa18.75■□□□□ 0.59
LINC00543-201ENST00000567234 M0R1W7 72 aa18.75■□□□□ 0.59
LINC00543-201ENST00000567234 NPSP0C0P6 89 aa18.75■□□□□ 0.59
LINC00543-201ENST00000567234 LINC01551Q86U37 167 aa18.75■□□□□ 0.59
LINC00543-201ENST00000567234 SSBP3Q9BWW4 388 aaPredicted RBP18.75■□□□□ 0.59
LINC00543-201ENST00000567234 AURKAIP1Q9NWT8 199 aaPredicted RBP18.75■□□□□ 0.59
LINC00543-201ENST00000567234 LRBAP50851 2863 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 A0A0U1RQK1 487 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 ZNF320A2RRD8 509 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 ERHP84090 104 aaKnown RBP18.74■□□□□ 0.59
LINC00543-201ENST00000567234 TEPPQ6URK8 271 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 TEX45Q8NA69 505 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 MGST2Q99735 147 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 VAMP8Q9BV40 100 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 GGTLC1Q9BX51 225 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 ONECUT1Q9UBC0 465 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 Q0VG73 95 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 RAB31Q13636 194 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 OR4P4Q8NGL7 312 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 SLC25A22Q9H936 323 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 INSIG2Q9Y5U4 225 aa18.74■□□□□ 0.59
LINC00543-201ENST00000567234 LOC105371242A0A075B767 164 aa18.73■□□□□ 0.59
LINC00543-201ENST00000567234 IGHV1-3A0A0C4DH29 117 aa18.73■□□□□ 0.59
LINC00543-201ENST00000567234 RNASE2P10153 161 aaKnown RBP18.73■□□□□ 0.59
LINC00543-201ENST00000567234 FAM78BQ5VT40 261 aa18.73■□□□□ 0.59
LINC00543-201ENST00000567234 UBTD1Q9HAC8 227 aa18.73■□□□□ 0.59
LINC00543-201ENST00000567234 UTP20O75691 2785 aaKnown RBP18.73■□□□□ 0.59
LINC00543-201ENST00000567234 LY6LH3BQJ8 138 aa18.72■□□□□ 0.59
LINC00543-201ENST00000567234 GOSR1O95249 250 aa18.72■□□□□ 0.59
LINC00543-201ENST00000567234 GPR6P46095 362 aaPredicted RBP18.72■□□□□ 0.59
LINC00543-201ENST00000567234 CDC34P49427 236 aaPredicted RBP18.72■□□□□ 0.59
LINC00543-201ENST00000567234 RPL19P84098 196 aaKnown RBP18.72■□□□□ 0.59
LINC00543-201ENST00000567234 COX19Q49B96 90 aa18.72■□□□□ 0.59
LINC00543-201ENST00000567234 OR11H6Q8NGC7 330 aa18.72■□□□□ 0.59
LINC00543-201ENST00000567234 C1orf159Q96HA4 380 aa18.72■□□□□ 0.59
LINC00543-201ENST00000567234 EFNA4P52798 201 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms