RNA–Protein interactions for RNA: ENST00000567006.1

ACSM3-210, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 2

Gene ACSM3, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-210ENST00000567006 RNASE10Q5GAN6 216 aaKnown RBP0.46□□□□□ -2.34
ACSM3-210ENST00000567006 TEX261Q6UWH6 196 aa0.46□□□□□ -2.34
ACSM3-210ENST00000567006 TRAPPC6BQ86SZ2 158 aa0.46□□□□□ -2.34
ACSM3-210ENST00000567006 SIGLECL1Q8N7X8 197 aa0.46□□□□□ -2.34
ACSM3-210ENST00000567006 KLK6Q92876 244 aa0.46□□□□□ -2.34
ACSM3-210ENST00000567006 TMEM70Q9BUB7 260 aa0.46□□□□□ -2.34
ACSM3-210ENST00000567006 XPNPEP1Q9NQW7 623 aa0.46□□□□□ -2.34
ACSM3-210ENST00000567006 ERGIC3Q9Y282 383 aa0.46□□□□□ -2.34
ACSM3-210ENST00000567006 SLC35A3Q9Y2D2 325 aa0.46□□□□□ -2.34
ACSM3-210ENST00000567006 U3KQ87 197 aa0.46□□□□□ -2.34
ACSM3-210ENST00000567006 SCN3AQ9NY46 2000 aa0.46□□□□□ -2.34
ACSM3-210ENST00000567006 TRAV12-1A0A0B4J245 112 aa0.45□□□□□ -2.34
ACSM3-210ENST00000567006 DPRXA6NFQ7 191 aa0.45□□□□□ -2.34
ACSM3-210ENST00000567006 CALB1P05937 261 aa0.45□□□□□ -2.34
ACSM3-210ENST00000567006 CD79AP11912 226 aa0.45□□□□□ -2.34
ACSM3-210ENST00000567006 KRTAP21-1Q3LI58 79 aa0.45□□□□□ -2.34
ACSM3-210ENST00000567006 SOSTDC1Q6X4U4 206 aa0.45□□□□□ -2.34
ACSM3-210ENST00000567006 ANKRD29Q8N6D5 301 aa0.45□□□□□ -2.34
ACSM3-210ENST00000567006 H1FXQ92522 213 aaKnown RBP0.45□□□□□ -2.34
ACSM3-210ENST00000567006 SLC35B4Q969S0 331 aa0.45□□□□□ -2.34
ACSM3-210ENST00000567006 CDC42SE1Q9NRR8 79 aa0.45□□□□□ -2.34
ACSM3-210ENST00000567006 HS3ST2Q9Y278 367 aa0.45□□□□□ -2.34
ACSM3-210ENST00000567006 TOPBP1Q92547 1522 aa0.44□□□□□ -2.34
ACSM3-210ENST00000567006 ZNF25P17030 456 aaPredicted RBP0.44□□□□□ -2.34
ACSM3-210ENST00000567006 S100A4P26447 101 aaKnown RBP0.44□□□□□ -2.34
ACSM3-210ENST00000567006 MAGOHP61326 146 aaKnown RBP0.44□□□□□ -2.34
ACSM3-210ENST00000567006 SRSF6Q13247 344 aaKnown RBP0.44□□□□□ -2.34
ACSM3-210ENST00000567006 C1orf137Q5JT78 98 aa0.44□□□□□ -2.34
ACSM3-210ENST00000567006 CCDC122Q5T0U0 273 aa0.44□□□□□ -2.34
ACSM3-210ENST00000567006 GKN2Q86XP6 184 aa0.44□□□□□ -2.34
ACSM3-210ENST00000567006 C11orf68Q9H3H3 251 aaKnown RBP0.44□□□□□ -2.34
ACSM3-210ENST00000567006 OSTCQ9NRP0 149 aa0.44□□□□□ -2.34
ACSM3-210ENST00000567006 CMTM6Q9NX76 183 aa0.44□□□□□ -2.34
ACSM3-210ENST00000567006 ATP6V1DQ9Y5K8 247 aa0.44□□□□□ -2.34
ACSM3-210ENST00000567006 TMEM56-RWDD3S4R434 201 aa0.44□□□□□ -2.34
ACSM3-210ENST00000567006 CEP192Q8TEP8 1941 aa0.44□□□□□ -2.34
ACSM3-210ENST00000567006 CCDC160A6NGH7 325 aa0.43□□□□□ -2.34
ACSM3-210ENST00000567006 LYZL6O75951 148 aa0.43□□□□□ -2.34
ACSM3-210ENST00000567006 SPCS3P61009 180 aa0.43□□□□□ -2.34
ACSM3-210ENST00000567006 SNRPD2P62316 118 aaKnown RBP0.43□□□□□ -2.34
ACSM3-210ENST00000567006 ALKAL1Q6UXT8 129 aa0.43□□□□□ -2.34
ACSM3-210ENST00000567006 OR10J5Q8NHC4 309 aa0.43□□□□□ -2.34
ACSM3-210ENST00000567006 TEX47Q8TBZ9 253 aa0.43□□□□□ -2.34
ACSM3-210ENST00000567006 ITFG2Q969R8 447 aa0.43□□□□□ -2.34
ACSM3-210ENST00000567006 COL4A5P29400 1685 aa0.43□□□□□ -2.34
ACSM3-210ENST00000567006 ADGRB2O60241 1585 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 EXOC1LA0A1B0GW35 172 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 ZNF736B4DX44 427 aaPredicted RBP0.42□□□□□ -2.34
ACSM3-210ENST00000567006 FAAHO00519 579 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 CETN3O15182 167 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 TGOLN2O43493 480 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 CRYZL1O95825 349 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 HIST1H1TP22492 207 aaPredicted RBP0.42□□□□□ -2.34
ACSM3-210ENST00000567006 SPOPLQ6IQ16 392 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 C3orf56Q8N813 242 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 OR13D1Q8NGV5 346 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 PTH2Q96A98 100 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 GPR146Q96CH1 333 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 C6orf62Q9GZU0 229 aaPredicted RBP0.42□□□□□ -2.34
ACSM3-210ENST00000567006 TP73-AS1Q9UF72 201 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 MTUS2Q5JR59 1369 aa0.42□□□□□ -2.34
ACSM3-210ENST00000567006 CNTRLQ7Z7A1 2325 aa0.41□□□□□ -2.34
ACSM3-210ENST00000567006 DENND4CQ5VZ89 1909 aa0.41□□□□□ -2.34
ACSM3-210ENST00000567006 C7orf71A4D174 169 aa0.41□□□□□ -2.34
ACSM3-210ENST00000567006 YPEL3P61236 119 aaPredicted RBP0.41□□□□□ -2.34
ACSM3-210ENST00000567006 FAM74A1Q5RGS3 127 aa0.41□□□□□ -2.34
ACSM3-210ENST00000567006 DCUN1D1Q96GG9 259 aa0.41□□□□□ -2.34
ACSM3-210ENST00000567006 PPP1R2P1Q96PQ5 205 aa0.41□□□□□ -2.34
ACSM3-210ENST00000567006 BUB1B-PAK6H3BSN5 160 aa0.4□□□□□ -2.35
ACSM3-210ENST00000567006 SULT1A1P50225 295 aa0.4□□□□□ -2.35
ACSM3-210ENST00000567006 PSG9Q00887 426 aa0.4□□□□□ -2.35
ACSM3-210ENST00000567006 C20orf27Q9GZN8 174 aa0.4□□□□□ -2.35
ACSM3-210ENST00000567006 CCDC90BQ9GZT6 254 aa0.4□□□□□ -2.35
ACSM3-210ENST00000567006 TMEM14CQ9P0S9 112 aa0.4□□□□□ -2.35
ACSM3-210ENST00000567006 EPDR1Q9UM22 224 aa0.4□□□□□ -2.35
ACSM3-210ENST00000567006 USP24Q9UPU5 2620 aa0.39□□□□□ -2.35
ACSM3-210ENST00000567006 DOCK3Q8IZD9 2030 aa0.39□□□□□ -2.35
ACSM3-210ENST00000567006 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
ACSM3-210ENST00000567006 PIRO00625 290 aa0.39□□□□□ -2.35
ACSM3-210ENST00000567006 RBP1P09455 135 aa0.39□□□□□ -2.35
ACSM3-210ENST00000567006 HIST1H1EP10412 219 aaKnown RBP0.39□□□□□ -2.35
ACSM3-210ENST00000567006 ANP32AP39687 249 aaKnown RBP0.39□□□□□ -2.35
ACSM3-210ENST00000567006 RPL5P46777 297 aaKnown RBP0.39□□□□□ -2.35
ACSM3-210ENST00000567006 CDC42P60953 191 aa0.39□□□□□ -2.35
ACSM3-210ENST00000567006 CLECL1Q8IZS7 167 aa0.39□□□□□ -2.35
ACSM3-210ENST00000567006 KRT222Q8N1A0 295 aa0.39□□□□□ -2.35
ACSM3-210ENST00000567006 TMEM86BQ8N661 226 aa0.39□□□□□ -2.35
ACSM3-210ENST00000567006 DCSTAMPQ9H295 470 aa0.39□□□□□ -2.35
ACSM3-210ENST00000567006 NUP155O75694 1391 aa0.39□□□□□ -2.35
ACSM3-210ENST00000567006 DOCK5Q9H7D0 1870 aa0.38□□□□□ -2.35
ACSM3-210ENST00000567006 TGIF2-C20orf24A0A0A6YYL0 155 aa0.38□□□□□ -2.35
ACSM3-210ENST00000567006 DNAL4O96015 105 aa0.38□□□□□ -2.35
ACSM3-210ENST00000567006 OR4E1P0C645 316 aa0.38□□□□□ -2.35
ACSM3-210ENST00000567006 CASP1P29466 404 aa0.38□□□□□ -2.35
ACSM3-210ENST00000567006 OR2F1Q13607 317 aa0.38□□□□□ -2.35
ACSM3-210ENST00000567006 ACOT6Q3I5F7 207 aaPredicted RBP0.38□□□□□ -2.35
ACSM3-210ENST00000567006 C8orf74Q6P047 294 aa0.38□□□□□ -2.35
ACSM3-210ENST00000567006 CYSLTR1Q9Y271 337 aa0.38□□□□□ -2.35
ACSM3-210ENST00000567006 KMT2DO14686 5537 aa0.38□□□□□ -2.35
ACSM3-210ENST00000567006 MYO3BQ8WXR4 1341 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms