RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 LAMTOR1Q6IAA8 161 aa14.52□□□□□ -0.09
CCDC113-204ENST00000566498 HIPK2Q9H2X6 1198 aa14.52□□□□□ -0.09
CCDC113-204ENST00000566498 SHPKQ9UHJ6 478 aa14.52□□□□□ -0.09
CCDC113-204ENST00000566498 PIGBOS1A0A0B4J2F0 54 aa14.51□□□□□ -0.09
CCDC113-204ENST00000566498 LINC00854A0A1B0GVQ3 168 aa14.51□□□□□ -0.09
CCDC113-204ENST00000566498 CCR6P51684 374 aa14.51□□□□□ -0.09
CCDC113-204ENST00000566498 BAK1Q16611 211 aa14.51□□□□□ -0.09
CCDC113-204ENST00000566498 TRAV14DV4A0A0A6YYC5 116 aa14.5□□□□□ -0.09
CCDC113-204ENST00000566498 TMEM50AO95807 157 aa14.5□□□□□ -0.09
CCDC113-204ENST00000566498 SMCO1Q147U7 214 aa14.5□□□□□ -0.09
CCDC113-204ENST00000566498 HAGHQ16775 308 aa14.5□□□□□ -0.09
CCDC113-204ENST00000566498 PVRIGQ6DKI7 326 aa14.5□□□□□ -0.09
CCDC113-204ENST00000566498 SMPXQ9UHP9 88 aa14.5□□□□□ -0.09
CCDC113-204ENST00000566498 IGHV3-49A0A0A0MS15 119 aa14.49□□□□□ -0.09
CCDC113-204ENST00000566498 TMEM116Q8NCL8 245 aa14.49□□□□□ -0.09
CCDC113-204ENST00000566498 OR1S1Q8NH92 325 aa14.49□□□□□ -0.09
CCDC113-204ENST00000566498 TM2D3Q9BRN9 247 aa14.49□□□□□ -0.09
CCDC113-204ENST00000566498 WFDC10AQ9H1F0 79 aa14.49□□□□□ -0.09
CCDC113-204ENST00000566498 SRD5A3Q9H8P0 318 aa14.49□□□□□ -0.09
CCDC113-204ENST00000566498 RPS10-NUDT3A0A1W2PQS6 291 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 TNFRSF9Q07011 255 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 RBMS2Q15434 407 aaKnown RBP14.48□□□□□ -0.09
CCDC113-204ENST00000566498 BSXQ3C1V8 233 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 C2orf83Q53S99 150 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 NMSQ5H8A3 153 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 TOMM20LQ6UXN7 152 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 NOXA1Q86UR1 476 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 CENPSQ8N2Z9 138 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 SLC24A4Q8NFF2 622 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 OR10C1Q96KK4 312 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 GINS3Q9BRX5 216 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 RHPN1-AS1Q9BWJ2 59 aa14.48□□□□□ -0.09
CCDC113-204ENST00000566498 FNDC4Q9H6D8 234 aaPredicted RBP14.48□□□□□ -0.09
CCDC113-204ENST00000566498 IGHV7-4-1A0A0J9YVY3 117 aa14.47□□□□□ -0.09
CCDC113-204ENST00000566498 A0A1B0GU03 582 aa14.47□□□□□ -0.09
CCDC113-204ENST00000566498 NAP1L6A6NFF2 107 aa14.47□□□□□ -0.09
CCDC113-204ENST00000566498 CENPXA8MT69 81 aa14.47□□□□□ -0.09
CCDC113-204ENST00000566498 SCGB2A1O75556 95 aa14.47□□□□□ -0.09
CCDC113-204ENST00000566498 IFNA10P01566 189 aa14.47□□□□□ -0.09
CCDC113-204ENST00000566498 ZNF600Q6ZNG1 722 aa14.47□□□□□ -0.09
CCDC113-204ENST00000566498 OR4X1Q8NH49 305 aa14.47□□□□□ -0.09
CCDC113-204ENST00000566498 SPAG8Q99932 426 aaPredicted RBP14.47□□□□□ -0.09
CCDC113-204ENST00000566498 SPATA25Q9BR10 227 aa14.47□□□□□ -0.09
CCDC113-204ENST00000566498 RBKSQ9H477 322 aa14.47□□□□□ -0.09
CCDC113-204ENST00000566498 PUS1Q9Y606 427 aaKnown RBP eCLIP14.47□□□□□ -0.09
CCDC113-204ENST00000566498 IGHV3OR16-13A0A075B7E8 117 aa14.46□□□□□ -0.09
CCDC113-204ENST00000566498 IGHV3-74A0A0B4J1X5 117 aa14.46□□□□□ -0.09
CCDC113-204ENST00000566498 RBMY1BA6NDE4 496 aaKnown RBP14.46□□□□□ -0.09
CCDC113-204ENST00000566498 RBMY1EA6NEQ0 496 aaKnown RBP14.46□□□□□ -0.09
CCDC113-204ENST00000566498 CHEK1O14757 476 aa14.46□□□□□ -0.09
CCDC113-204ENST00000566498 TSPAN4O14817 238 aa14.46□□□□□ -0.09
CCDC113-204ENST00000566498 CLN5O75503 358 aa14.46□□□□□ -0.09
CCDC113-204ENST00000566498 SFT2D2O95562 160 aa14.46□□□□□ -0.09
CCDC113-204ENST00000566498 RBMY1DP0C7P1 496 aaKnown RBP14.46□□□□□ -0.09
CCDC113-204ENST00000566498 PPP1R1AQ13522 171 aa14.46□□□□□ -0.09
CCDC113-204ENST00000566498 RNASEH2CQ8TDP1 164 aaKnown RBP14.46□□□□□ -0.09
CCDC113-204ENST00000566498 DTD1Q8TEA8 209 aa14.46□□□□□ -0.09
CCDC113-204ENST00000566498 ZNF414Q96IQ9 312 aa14.46□□□□□ -0.09
CCDC113-204ENST00000566498 RNF2Q99496 336 aa14.46□□□□□ -0.09
CCDC113-204ENST00000566498 MRPL36Q9P0J6 103 aaKnown RBP14.46□□□□□ -0.09
CCDC113-204ENST00000566498 HSPB7Q9UBY9 170 aa14.46□□□□□ -0.09
CCDC113-204ENST00000566498 TRAV30A0A087WSZ9 112 aa14.45□□□□□ -0.1
CCDC113-204ENST00000566498 DUXBA0A1W2PPF3 345 aa14.45□□□□□ -0.1
CCDC113-204ENST00000566498 NPY1RP25929 384 aa14.45□□□□□ -0.1
CCDC113-204ENST00000566498 SDHCQ99643 169 aaPredicted RBP14.45□□□□□ -0.1
CCDC113-204ENST00000566498 U3KQ87 197 aa14.45□□□□□ -0.1
CCDC113-204ENST00000566498 IGKV3-7A0A075B6H7 116 aa14.44□□□□□ -0.1
CCDC113-204ENST00000566498 SLC25A4P12235 298 aa14.44□□□□□ -0.1
CCDC113-204ENST00000566498 BMI1P35226 326 aa14.44□□□□□ -0.1
CCDC113-204ENST00000566498 ETFRF1Q6IPR1 90 aa14.44□□□□□ -0.1
CCDC113-204ENST00000566498 LINC00322Q6ZN03 302 aaPredicted RBP14.44□□□□□ -0.1
CCDC113-204ENST00000566498 LRTM2Q8N967 370 aa14.44□□□□□ -0.1
CCDC113-204ENST00000566498 UBQLN2Q9UHD9 624 aa14.44□□□□□ -0.1
CCDC113-204ENST00000566498 TMED3Q9Y3Q3 217 aa14.44□□□□□ -0.1
CCDC113-204ENST00000566498 OR4C46A6NHA9 309 aa14.43□□□□□ -0.1
CCDC113-204ENST00000566498 NDUFB6O95139 128 aa14.43□□□□□ -0.1
CCDC113-204ENST00000566498 IFNA4P05014 189 aa14.43□□□□□ -0.1
CCDC113-204ENST00000566498 HOXB5P09067 269 aa14.43□□□□□ -0.1
CCDC113-204ENST00000566498 IL7P13232 177 aa14.43□□□□□ -0.1
CCDC113-204ENST00000566498 NPPCP23582 126 aa14.43□□□□□ -0.1
CCDC113-204ENST00000566498 RND2P52198 227 aa14.43□□□□□ -0.1
CCDC113-204ENST00000566498 TIGITQ495A1 244 aa14.43□□□□□ -0.1
CCDC113-204ENST00000566498 PRSS54Q6PEW0 395 aa14.43□□□□□ -0.1
CCDC113-204ENST00000566498 FLVCR2Q9UPI3 526 aa14.43□□□□□ -0.1
CCDC113-204ENST00000566498 IGHV3-66A0A0C4DH42 116 aa14.42□□□□□ -0.1
CCDC113-204ENST00000566498 APOHP02749 345 aaPredicted RBP14.42□□□□□ -0.1
CCDC113-204ENST00000566498 TFPI2P48307 235 aa14.42□□□□□ -0.1
CCDC113-204ENST00000566498 UBE2MP61081 183 aaKnown RBP14.42□□□□□ -0.1
CCDC113-204ENST00000566498 RPL11P62913 178 aaKnown RBP14.42□□□□□ -0.1
CCDC113-204ENST00000566498 TMEM170AQ8WVE7 144 aa14.42□□□□□ -0.1
CCDC113-204ENST00000566498 ACY3Q96HD9 319 aa14.42□□□□□ -0.1
CCDC113-204ENST00000566498 C7orf50Q9BRJ6 194 aaKnown RBP14.42□□□□□ -0.1
CCDC113-204ENST00000566498 LOC102724200A0A096LPH7 203 aaPredicted RBP14.41□□□□□ -0.1
CCDC113-204ENST00000566498 C9orf170A2RU37 121 aa14.41□□□□□ -0.1
CCDC113-204ENST00000566498 SLC25A6P12236 298 aa14.41□□□□□ -0.1
CCDC113-204ENST00000566498 OR10J1P30954 320 aa14.41□□□□□ -0.1
CCDC113-204ENST00000566498 PAFAH1B2P68402 229 aa14.41□□□□□ -0.1
CCDC113-204ENST00000566498 TCF24Q7RTU0 167 aa14.41□□□□□ -0.1
CCDC113-204ENST00000566498 GBGT1Q8N5D6 347 aa14.41□□□□□ -0.1
CCDC113-204ENST00000566498 OR1S2Q8NGQ3 325 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms