RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 TMEM217Q8N7C4 229 aa12.29□□□□□ -0.44
TSR3-202ENST00000566296 IL22RA2Q969J5 263 aa12.29□□□□□ -0.44
TSR3-202ENST00000566296 TMEM56Q96MV1 263 aa12.29□□□□□ -0.44
TSR3-202ENST00000566296 DAZ1Q9NQZ3 744 aaKnown RBP12.29□□□□□ -0.44
TSR3-202ENST00000566296 KLK5Q9Y337 293 aaPredicted RBP12.29□□□□□ -0.44
TSR3-202ENST00000566296 TMEM56-RWDD3S4R434 201 aa12.29□□□□□ -0.44
TSR3-202ENST00000566296 TRAV3A0A0B4J244 114 aa12.28□□□□□ -0.44
TSR3-202ENST00000566296 OR4C46A6NHA9 309 aa12.28□□□□□ -0.44
TSR3-202ENST00000566296 MARCH11A6NNE9 402 aa12.28□□□□□ -0.44
TSR3-202ENST00000566296 PRAF2O60831 178 aa12.28□□□□□ -0.44
TSR3-202ENST00000566296 KRASP01116 189 aa12.28□□□□□ -0.44
TSR3-202ENST00000566296 IL5P05113 134 aa12.28□□□□□ -0.44
TSR3-202ENST00000566296 CEMP1Q6PRD7 247 aaPredicted RBP12.28□□□□□ -0.44
TSR3-202ENST00000566296 STPG3Q8N7X2 389 aa12.28□□□□□ -0.44
TSR3-202ENST00000566296 RBPMSQ93062 196 aaKnown RBP12.28□□□□□ -0.44
TSR3-202ENST00000566296 BSCL2Q96G97 398 aaPredicted RBP12.28□□□□□ -0.44
TSR3-202ENST00000566296 KIR2DL5BA0A0G2JN68 375 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 KIR2DL5BA0A0G2JPC4 375 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 OR2T8A6NH00 312 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 IGKV1-39P01597 117 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 IGKV1D-39P04432 117 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 TRAPPC2P0DI81 140 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 TRAPPC2BP0DI82 140 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 OR13C7P0DN81 318 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 ATF4P18848 351 aaPredicted RBP12.27□□□□□ -0.45
TSR3-202ENST00000566296 AKR1C2P52895 323 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 OXA1LQ15070 435 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 TMEM268Q5VZI3 342 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 SLC25A24Q6NUK1 477 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 SPSB3Q6PJ21 355 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 SELENOHQ8IZQ5 122 aaKnown RBP12.27□□□□□ -0.45
TSR3-202ENST00000566296 KIR2DL5AQ8N109 375 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 LRTM2Q8N967 370 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 OR10W1Q8NGF6 305 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 KIR2DL5BQ8NHK3 375 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 COQ8AQ8NI60 647 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 SEC22AQ96IW7 307 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 C20orf24Q9BUV8 137 aa12.27□□□□□ -0.45
TSR3-202ENST00000566296 GPN1Q9HCN4 374 aaPredicted RBP12.27□□□□□ -0.45
TSR3-202ENST00000566296 A0A0B4J2A0 478 aa12.26□□□□□ -0.45
TSR3-202ENST00000566296 DUXBA0A1W2PPF3 345 aa12.26□□□□□ -0.45
TSR3-202ENST00000566296 NDUFA4O00483 81 aa12.26□□□□□ -0.45
TSR3-202ENST00000566296 G6PCP35575 357 aa12.26□□□□□ -0.45
TSR3-202ENST00000566296 OR1L8Q8NGR8 309 aa12.26□□□□□ -0.45
TSR3-202ENST00000566296 LHFPL5Q8TAF8 219 aa12.26□□□□□ -0.45
TSR3-202ENST00000566296 ZNF431Q8TF32 576 aaPredicted RBP12.26□□□□□ -0.45
TSR3-202ENST00000566296 LSM10Q969L4 123 aaKnown RBP12.26□□□□□ -0.45
TSR3-202ENST00000566296 RRNAD1Q96FB5 475 aaKnown RBP12.26□□□□□ -0.45
TSR3-202ENST00000566296 ATP6V0BQ99437 205 aa12.26□□□□□ -0.45
TSR3-202ENST00000566296 HINT2Q9BX68 163 aa12.26□□□□□ -0.45
TSR3-202ENST00000566296 C21orf62Q9NYP8 219 aa12.26□□□□□ -0.45
TSR3-202ENST00000566296 SHPKQ9UHJ6 478 aa12.26□□□□□ -0.45
TSR3-202ENST00000566296 RPL35AP18077 110 aaKnown RBP12.25□□□□□ -0.45
TSR3-202ENST00000566296 EWSR1Q01844 656 aaKnown RBP eCLIP12.25□□□□□ -0.45
TSR3-202ENST00000566296 ODF3L2Q3SX64 289 aa12.25□□□□□ -0.45
TSR3-202ENST00000566296 H2BFWTQ7Z2G1 175 aa12.25□□□□□ -0.45
TSR3-202ENST00000566296 FAM219AQ8IW50 185 aa12.25□□□□□ -0.45
TSR3-202ENST00000566296 SLC35G3Q8N808 338 aa12.25□□□□□ -0.45
TSR3-202ENST00000566296 RNASE11Q8TAA1 199 aaKnown RBP12.25□□□□□ -0.45
TSR3-202ENST00000566296 MITD1Q8WV92 249 aa12.25□□□□□ -0.45
TSR3-202ENST00000566296 RNF183Q96D59 192 aa12.25□□□□□ -0.45
TSR3-202ENST00000566296 SEC22CQ9BRL7 303 aa12.25□□□□□ -0.45
TSR3-202ENST00000566296 PRR13Q9NZ81 148 aa12.25□□□□□ -0.45
TSR3-202ENST00000566296 F11RQ9Y624 299 aaKnown RBP12.25□□□□□ -0.45
TSR3-202ENST00000566296 IGHV3-21A0A0B4J1V1 117 aa12.24□□□□□ -0.45
TSR3-202ENST00000566296 SNRPGP15A8MWD9 76 aa12.24□□□□□ -0.45
TSR3-202ENST00000566296 IGKV1-5P01602 117 aa12.24□□□□□ -0.45
TSR3-202ENST00000566296 WT1-ASQ06250 92 aa12.24□□□□□ -0.45
TSR3-202ENST00000566296 Q56UQ5 140 aa12.24□□□□□ -0.45
TSR3-202ENST00000566296 UBAC2Q8NBM4 344 aa12.24□□□□□ -0.45
TSR3-202ENST00000566296 TMED3Q9Y3Q3 217 aa12.24□□□□□ -0.45
TSR3-202ENST00000566296 KMT2AQ03164 3969 aa12.23□□□□□ -0.45
TSR3-202ENST00000566296 TEX50A0A1B0GTY4 177 aa12.23□□□□□ -0.45
TSR3-202ENST00000566296 K7EMT4 169 aa12.23□□□□□ -0.45
TSR3-202ENST00000566296 SNAPC5O75971 98 aa12.23□□□□□ -0.45
TSR3-202ENST00000566296 P0C879 139 aa12.23□□□□□ -0.45
TSR3-202ENST00000566296 LYZL2Q7Z4W2 148 aa12.23□□□□□ -0.45
TSR3-202ENST00000566296 C12orf45Q8N5I9 185 aaPredicted RBP12.23□□□□□ -0.45
TSR3-202ENST00000566296 DNAH10Q8IVF4 4471 aa12.23□□□□□ -0.45
TSR3-202ENST00000566296 FRAS1Q86XX4 4008 aa12.22□□□□□ -0.45
TSR3-202ENST00000566296 ZNF207O43670 478 aaKnown RBP12.22□□□□□ -0.45
TSR3-202ENST00000566296 OR5B3Q8NH48 314 aa12.22□□□□□ -0.45
TSR3-202ENST00000566296 OR4A16Q8NH70 328 aa12.22□□□□□ -0.45
TSR3-202ENST00000566296 SCARB1Q8WTV0 552 aa12.22□□□□□ -0.45
TSR3-202ENST00000566296 CHRDL1Q9BU40 450 aa12.22□□□□□ -0.45
TSR3-202ENST00000566296 MAP6D1Q9H9H5 199 aa12.22□□□□□ -0.45
TSR3-202ENST00000566296 NDUFA4L2Q9NRX3 87 aa12.22□□□□□ -0.45
TSR3-202ENST00000566296 FKBP11Q9NYL4 201 aa12.22□□□□□ -0.45
TSR3-202ENST00000566296 PRNDQ9UKY0 176 aa12.22□□□□□ -0.45
TSR3-202ENST00000566296 OR51B2Q9Y5P1 312 aa12.22□□□□□ -0.45
TSR3-202ENST00000566296 IGHV3OR16-8A0A075B7F1 116 aa12.21□□□□□ -0.45
TSR3-202ENST00000566296 C7orf66A4D0T2 115 aa12.21□□□□□ -0.45
TSR3-202ENST00000566296 DBX1A6NMT0 343 aa12.21□□□□□ -0.45
TSR3-202ENST00000566296 C15orf62A8K5M9 175 aa12.21□□□□□ -0.45
TSR3-202ENST00000566296 IFNA21P01568 189 aa12.21□□□□□ -0.45
TSR3-202ENST00000566296 ADMP35318 185 aa12.21□□□□□ -0.45
TSR3-202ENST00000566296 RELQ04864 619 aaPredicted RBP12.21□□□□□ -0.45
TSR3-202ENST00000566296 NMSQ5H8A3 153 aa12.21□□□□□ -0.45
TSR3-202ENST00000566296 NSG2Q9Y328 171 aa12.21□□□□□ -0.45
TSR3-202ENST00000566296 A0A0G2JRQ6 117 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms