RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 LRTM2Q8N967 370 aa9.96□□□□□ -0.82
COMMD4-214ENST00000566230 ZNF114Q8NC26 417 aa9.96□□□□□ -0.82
COMMD4-214ENST00000566230 OR52B4Q8NGK2 314 aa9.96□□□□□ -0.82
COMMD4-214ENST00000566230 GPR146Q96CH1 333 aa9.96□□□□□ -0.82
COMMD4-214ENST00000566230 VPS13DQ5THJ4 4388 aa9.96□□□□□ -0.82
COMMD4-214ENST00000566230 A0A0G2JRQ6 117 aa9.95□□□□□ -0.82
COMMD4-214ENST00000566230 LINC00854A0A1B0GVQ3 168 aa9.95□□□□□ -0.82
COMMD4-214ENST00000566230 TMEM213A2RRL7 107 aa9.95□□□□□ -0.82
COMMD4-214ENST00000566230 PLA2G10O15496 165 aa9.95□□□□□ -0.82
COMMD4-214ENST00000566230 SCAF4O95104 1147 aaKnown RBP9.95□□□□□ -0.82
COMMD4-214ENST00000566230 SFT2D2O95562 160 aa9.95□□□□□ -0.82
COMMD4-214ENST00000566230 CLEC3BP05452 202 aa9.95□□□□□ -0.82
COMMD4-214ENST00000566230 SLC35G3Q8N808 338 aa9.95□□□□□ -0.82
COMMD4-214ENST00000566230 ENY2Q9NPA8 101 aa9.95□□□□□ -0.82
COMMD4-214ENST00000566230 A0A1B0GU03 582 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 LYRM1O43325 122 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 IGHV3-23P01764 117 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 SULT1A3P0DMM9 295 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 SULT1A4P0DMN0 295 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 VAMP1P23763 118 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 MFAP2P55001 183 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 ZNF846Q147U1 533 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 FAM106AQ4KMX7 169 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 TM4SF20Q53R12 229 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 CLEC19AQ6UXS0 136 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 LYZL2Q7Z4W2 148 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 UXS1Q8NBZ7 420 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 ZNF502Q8TBZ5 544 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 CCDC140Q96MF4 163 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 WDR12Q9GZL7 423 aaKnown RBP9.94□□□□□ -0.82
COMMD4-214ENST00000566230 CACNG5Q9UF02 275 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 TP53TG1Q9Y2A0 90 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 KLK5Q9Y337 293 aaPredicted RBP9.94□□□□□ -0.82
COMMD4-214ENST00000566230 S4R3C0 116 aa9.94□□□□□ -0.82
COMMD4-214ENST00000566230 A8MWP6 167 aa9.93□□□□□ -0.82
COMMD4-214ENST00000566230 SPRY2O43597 315 aa9.93□□□□□ -0.82
COMMD4-214ENST00000566230 SLC25A6P12236 298 aa9.93□□□□□ -0.82
COMMD4-214ENST00000566230 ATF4P18848 351 aaPredicted RBP9.93□□□□□ -0.82
COMMD4-214ENST00000566230 ARL3P36405 182 aa9.93□□□□□ -0.82
COMMD4-214ENST00000566230 PPP1R1AQ13522 171 aa9.93□□□□□ -0.82
COMMD4-214ENST00000566230 NMSQ5H8A3 153 aa9.93□□□□□ -0.82
COMMD4-214ENST00000566230 Q6ZWC4 215 aa9.93□□□□□ -0.82
COMMD4-214ENST00000566230 SCARB1Q8WTV0 552 aa9.93□□□□□ -0.82
COMMD4-214ENST00000566230 TXN2Q99757 166 aa9.93□□□□□ -0.82
COMMD4-214ENST00000566230 TMED3Q9Y3Q3 217 aa9.93□□□□□ -0.82
COMMD4-214ENST00000566230 DNAH6Q9C0G6 4158 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 ZNF320A2RRD8 509 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 MFSD2BA6NFX1 497 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 CORTO00230 105 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 OR4E1P0C645 316 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 FCGR2BP31994 310 aaPredicted RBP9.92□□□□□ -0.82
COMMD4-214ENST00000566230 BTCP35070 178 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 BMI1P35226 326 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 SMCO1Q147U7 214 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 DEFB135Q30KP9 77 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 ANKRD55Q3KP44 614 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 LGALS9CQ6DKI2 356 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 PVRIGQ6DKI7 326 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 MZT2BQ6NZ67 158 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 SPSB3Q6PJ21 355 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 PLET1Q6UQ28 207 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 BTNL8Q6UX41 500 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 C21orf62Q9NYP8 219 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 PRR13Q9NZ81 148 aa9.92□□□□□ -0.82
COMMD4-214ENST00000566230 C9orf170A2RU37 121 aa9.91□□□□□ -0.82
COMMD4-214ENST00000566230 I3L2K1 104 aa9.91□□□□□ -0.82
COMMD4-214ENST00000566230 K7EIM0 57 aa9.91□□□□□ -0.82
COMMD4-214ENST00000566230 TCRBP04435 133 aa9.91□□□□□ -0.82
COMMD4-214ENST00000566230 C8orf88P0DMB2 117 aa9.91□□□□□ -0.82
COMMD4-214ENST00000566230 HTR2BP41595 481 aa9.91□□□□□ -0.82
COMMD4-214ENST00000566230 HOXA1P49639 335 aaPredicted RBP9.91□□□□□ -0.82
COMMD4-214ENST00000566230 MFAP4P55083 255 aa9.91□□□□□ -0.82
COMMD4-214ENST00000566230 ATP5IP56385 69 aaPredicted RBP9.91□□□□□ -0.82
COMMD4-214ENST00000566230 UNQ9165/PRO28630Q6UXU0 137 aa9.91□□□□□ -0.82
COMMD4-214ENST00000566230 NOXA1Q86UR1 476 aa9.91□□□□□ -0.82
COMMD4-214ENST00000566230 BSCL2Q96G97 398 aaPredicted RBP9.91□□□□□ -0.82
COMMD4-214ENST00000566230 HEYLQ9NQ87 328 aaPredicted RBP9.91□□□□□ -0.82
COMMD4-214ENST00000566230 FLVCR2Q9UPI3 526 aa9.91□□□□□ -0.82
COMMD4-214ENST00000566230 TRAV25A0A0B4J276 109 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 CEBPZOSA8MTT3 80 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 TGOLN2O43493 480 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 PITX3O75364 302 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 RNASE2P10153 161 aaKnown RBP9.9□□□□□ -0.82
COMMD4-214ENST00000566230 APOC4P55056 127 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 BSXQ3C1V8 233 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 SPINK9Q5DT21 86 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 DUSP18Q8NEJ0 188 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 OR1S1Q8NH92 325 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 COQ8AQ8NI60 647 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 PHLDA1Q8WV24 401 aaPredicted RBP9.9□□□□□ -0.82
COMMD4-214ENST00000566230 RNF183Q96D59 192 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 MISP3Q96FF7 219 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 HSPB7Q9UBY9 170 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 U3KQ87 197 aa9.9□□□□□ -0.82
COMMD4-214ENST00000566230 FAM240BA0A1B0GVZ2 78 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 FAM90A26D6RGX4 464 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 UBE2CO00762 179 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 UPK1BO75841 260 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 MT-CO2P00403 227 aa9.89□□□□□ -0.83
COMMD4-214ENST00000566230 GPR183P32249 361 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms