RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 MDP1Q86V88 176 aa8.44□□□□□ -1.06
UBFD1-205ENST00000566136 FAM71E2Q8N5Q1 922 aa8.44□□□□□ -1.06
UBFD1-205ENST00000566136 ZFP62Q8NB50 900 aaPredicted RBP8.44□□□□□ -1.06
UBFD1-205ENST00000566136 VSIRQ9H7M9 311 aa8.44□□□□□ -1.06
UBFD1-205ENST00000566136 TRGV5A0A0B4J1U4 118 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 IGKV1D-13A0A0B4J2D9 117 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 IGHV3-64DA0A0J9YX35 117 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 TRAPPC2LH3BP13 241 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 SOX15O60248 233 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 IGKV1-13P0DP09 117 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 APLNRP35414 380 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 FGF12P61328 243 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 GMPPAQ96IJ6 420 aaPredicted RBP8.43□□□□□ -1.06
UBFD1-205ENST00000566136 TP53RKQ96S44 253 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 IDI2-AS1Q9NZ38 188 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 INSIG2Q9Y5U4 225 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 PRR14LQ5THK1 2151 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 FAM236DA0A1B0GTK5 79 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 SS18L1O75177 396 aaPredicted RBP8.43□□□□□ -1.06
UBFD1-205ENST00000566136 H2AFB1P0C5Y9 115 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 FAM236CP0DP71 79 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 ZNF25P17030 456 aaPredicted RBP8.43□□□□□ -1.06
UBFD1-205ENST00000566136 SLURP1P55000 103 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 PRR30Q53SZ7 412 aaPredicted RBP8.43□□□□□ -1.06
UBFD1-205ENST00000566136 ZCCHC24Q8N2G6 241 aaKnown RBP8.43□□□□□ -1.06
UBFD1-205ENST00000566136 SECTM1Q8WVN6 248 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 GALNT14Q96FL9 552 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 IP6K3Q96PC2 410 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 RNF122Q9H9V4 155 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 TAF9BQ9HBM6 251 aa8.43□□□□□ -1.06
UBFD1-205ENST00000566136 SPTBN1Q01082 2364 aaKnown RBP8.43□□□□□ -1.06
UBFD1-205ENST00000566136 LOC100131303A0A0U1RQF7 123 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 CDK2AP2O75956 126 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 NUDT3O95989 172 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 OR10J4P0C629 311 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 CA6P23280 308 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 TSPOP30536 169 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 CLINT1Q14677 625 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 SRSF7Q16629 238 aaKnown RBP eCLIP8.42□□□□□ -1.06
UBFD1-205ENST00000566136 SAMD13Q5VXD3 122 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 SLC16A13Q7RTY0 426 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 MKXQ8IYA7 352 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 C18orf12Q96KH6 178 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 PARP12Q9H0J9 701 aaKnown RBP8.42□□□□□ -1.06
UBFD1-205ENST00000566136 ADCYAP1P18509 176 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 HERPUD1Q15011 391 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 FBXW9Q5XUX1 488 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 RBMXL3Q8N7X1 1067 aaKnown RBP8.42□□□□□ -1.06
UBFD1-205ENST00000566136 SLC35G3Q8N808 338 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 OR5P3Q8WZ94 311 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 ARL11Q969Q4 196 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 RCHY1Q96PM5 261 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 SUCNR1Q9BXA5 334 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 COA4Q9NYJ1 87 aa8.42□□□□□ -1.06
UBFD1-205ENST00000566136 SVILO95425 2214 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 NAPSAO96009 420 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 FBP1P09467 338 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 SCGB1A1P11684 91 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 LPAR6P43657 344 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 DLX1P56177 255 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 RAB2AP61019 212 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 RPL24P83731 157 aaKnown RBP8.41□□□□□ -1.06
UBFD1-205ENST00000566136 ZNF616Q08AN1 781 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 OR5A2Q8NGI9 324 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 ADAT1Q9BUB4 502 aaKnown RBP8.41□□□□□ -1.06
UBFD1-205ENST00000566136 LOC102724200A0A096LPH7 203 aaPredicted RBP8.41□□□□□ -1.06
UBFD1-205ENST00000566136 TRAV39A0A0B4J263 110 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 IGKV1-6A0A0C4DH72 117 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 C3orf85A0A1B0GTC6 90 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 TMEM218A2RU14 115 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 AGPAT2O15120 278 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 RPL35P42766 123 aaKnown RBP8.41□□□□□ -1.06
UBFD1-205ENST00000566136 TFPI2P48307 235 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 REG3GQ6UW15 175 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 FBXW12Q6X9E4 464 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 ZNF818PQ6ZRF7 136 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 SAXO1Q8IYX7 474 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 SUMF2Q8NBJ7 301 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 URB1-AS1Q96HZ7 61 aa8.41□□□□□ -1.06
UBFD1-205ENST00000566136 ICE1Q9Y2F5 2266 aa8.4□□□□□ -1.06
UBFD1-205ENST00000566136 NKX2-6A6NCS4 301 aa8.4□□□□□ -1.06
UBFD1-205ENST00000566136 C15orf61A6NNL5 157 aa8.4□□□□□ -1.06
UBFD1-205ENST00000566136 TNFSF12O43508 249 aa8.4□□□□□ -1.06
UBFD1-205ENST00000566136 LYZL6O75951 148 aa8.4□□□□□ -1.06
UBFD1-205ENST00000566136 CD200P41217 278 aa8.4□□□□□ -1.06
UBFD1-205ENST00000566136 GUCA2BQ16661 112 aa8.4□□□□□ -1.06
UBFD1-205ENST00000566136 GLS2Q9UI32 602 aa8.4□□□□□ -1.06
UBFD1-205ENST00000566136 LYRM9A8MSI8 78 aa8.4□□□□□ -1.07
UBFD1-205ENST00000566136 DNASE2O00115 360 aaPredicted RBP8.4□□□□□ -1.07
UBFD1-205ENST00000566136 GNG5P63218 68 aa8.4□□□□□ -1.07
UBFD1-205ENST00000566136 REG3AQ06141 175 aa8.4□□□□□ -1.07
UBFD1-205ENST00000566136 MPV17LQ2QL34 196 aa8.4□□□□□ -1.07
UBFD1-205ENST00000566136 TMEM97Q5BJF2 176 aa8.4□□□□□ -1.07
UBFD1-205ENST00000566136 TMEM178AQ8NBL3 297 aa8.4□□□□□ -1.07
UBFD1-205ENST00000566136 UBALD1Q8TB05 177 aa8.4□□□□□ -1.07
UBFD1-205ENST00000566136 MRPL30Q8TCC3 161 aaKnown RBP8.4□□□□□ -1.07
UBFD1-205ENST00000566136 LRRC29Q8WV35 223 aa8.4□□□□□ -1.07
UBFD1-205ENST00000566136 NKX6-2Q9C056 277 aaPredicted RBP8.4□□□□□ -1.07
UBFD1-205ENST00000566136 ZDHHC11Q9H8X9 412 aa8.4□□□□□ -1.07
UBFD1-205ENST00000566136 CCL28Q9NRJ3 127 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms