RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 ZNF355PQ9NSJ1 428 aa23.96■■□□□ 1.43
CTCF-203ENST00000566078 MRPL36Q9P0J6 103 aaKnown RBP23.96■■□□□ 1.43
CTCF-203ENST00000566078 TSPAN9O75954 239 aa23.95■■□□□ 1.43
CTCF-203ENST00000566078 TMEM144Q7Z5S9 345 aa23.95■■□□□ 1.43
CTCF-203ENST00000566078 CUBNO60494 3623 aa23.95■■□□□ 1.42
CTCF-203ENST00000566078 K7EIM0 57 aa23.95■■□□□ 1.42
CTCF-203ENST00000566078 SOX15O60248 233 aa23.95■■□□□ 1.42
CTCF-203ENST00000566078 MPDU1O75352 247 aa23.95■■□□□ 1.42
CTCF-203ENST00000566078 HIST1H1BP16401 226 aaKnown RBP23.95■■□□□ 1.42
CTCF-203ENST00000566078 OR2G3Q8NGZ4 309 aa23.95■■□□□ 1.42
CTCF-203ENST00000566078 MGST2Q99735 147 aa23.95■■□□□ 1.42
CTCF-203ENST00000566078 THYN1Q9P016 225 aa23.95■■□□□ 1.42
CTCF-203ENST00000566078 LSM4Q9Y4Z0 139 aaKnown RBP23.95■■□□□ 1.42
CTCF-203ENST00000566078 OR2J3O76001 311 aa23.94■■□□□ 1.42
CTCF-203ENST00000566078 RND2P52198 227 aa23.94■■□□□ 1.42
CTCF-203ENST00000566078 DEFA5Q01523 94 aa23.94■■□□□ 1.42
CTCF-203ENST00000566078 ZNF580Q9UK33 172 aa23.94■■□□□ 1.42
CTCF-203ENST00000566078 CLDN34H7C241 214 aa23.93■■□□□ 1.42
CTCF-203ENST00000566078 TMEM182Q6ZP80 229 aaPredicted RBP23.93■■□□□ 1.42
CTCF-203ENST00000566078 NPIPB3Q92617 1050 aa23.93■■□□□ 1.42
CTCF-203ENST00000566078 PSMG3Q9BT73 122 aaPredicted RBP23.93■■□□□ 1.42
CTCF-203ENST00000566078 TIMM9Q9Y5J7 89 aa23.93■■□□□ 1.42
CTCF-203ENST00000566078 F8P00451 2351 aa23.93■■□□□ 1.42
CTCF-203ENST00000566078 ZNF709Q8N972 641 aa23.92■■□□□ 1.42
CTCF-203ENST00000566078 IGKV1OR2-108A0A075B7D4 117 aa23.92■■□□□ 1.42
CTCF-203ENST00000566078 C17orf112F2Z3M2 114 aa23.92■■□□□ 1.42
CTCF-203ENST00000566078 NDUFB8O95169 186 aa23.92■■□□□ 1.42
CTCF-203ENST00000566078 KLK9Q2XQG4 91 aa23.92■■□□□ 1.42
CTCF-203ENST00000566078 ACSM6Q6P461 480 aa23.92■■□□□ 1.42
CTCF-203ENST00000566078 PLA2G2EQ9NZK7 142 aa23.92■■□□□ 1.42
CTCF-203ENST00000566078 FBXL7Q9UJT9 491 aa23.92■■□□□ 1.42
CTCF-203ENST00000566078 KLK9Q9UKQ9 250 aa23.92■■□□□ 1.42
CTCF-203ENST00000566078 FAM181BA6NEQ2 426 aa23.91■■□□□ 1.42
CTCF-203ENST00000566078 PPIFP30405 207 aaKnown RBP23.91■■□□□ 1.42
CTCF-203ENST00000566078 CAMLGP49069 296 aa23.91■■□□□ 1.42
CTCF-203ENST00000566078 HILS1P60008 231 aa23.91■■□□□ 1.42
CTCF-203ENST00000566078 MS4A10Q96PG2 267 aa23.91■■□□□ 1.42
CTCF-203ENST00000566078 AGPAT2O15120 278 aa23.9■■□□□ 1.42
CTCF-203ENST00000566078 TMEM116Q8NCL8 245 aa23.9■■□□□ 1.42
CTCF-203ENST00000566078 PCNPQ8WW12 178 aaKnown RBP23.9■■□□□ 1.42
CTCF-203ENST00000566078 GGTLC1Q9BX51 225 aa23.9■■□□□ 1.42
CTCF-203ENST00000566078 S4R3C0 116 aa23.9■■□□□ 1.42
CTCF-203ENST00000566078 TRBV9A0A0B4J1U6 114 aa23.89■■□□□ 1.42
CTCF-203ENST00000566078 RHOGP84095 191 aa23.89■■□□□ 1.42
CTCF-203ENST00000566078 RAB31Q13636 194 aa23.89■■□□□ 1.42
CTCF-203ENST00000566078 CENPVQ7Z7K6 275 aaPredicted RBP23.89■■□□□ 1.42
CTCF-203ENST00000566078 MFSD2BA6NFX1 497 aa23.88■■□□□ 1.41
CTCF-203ENST00000566078 RNASE1P07998 156 aaKnown RBP23.88■■□□□ 1.41
CTCF-203ENST00000566078 CFHR3Q02985 330 aa23.88■■□□□ 1.41
CTCF-203ENST00000566078 THAP8Q8NA92 274 aa23.88■■□□□ 1.41
CTCF-203ENST00000566078 OR10J1P30954 320 aa23.88■■□□□ 1.41
CTCF-203ENST00000566078 SULT1A2P50226 295 aa23.88■■□□□ 1.41
CTCF-203ENST00000566078 ELLP55199 621 aaPredicted RBP23.88■■□□□ 1.41
CTCF-203ENST00000566078 Q8N2B8 174 aa23.88■■□□□ 1.41
CTCF-203ENST00000566078 FAM157CP0CG43 387 aa23.87■■□□□ 1.41
CTCF-203ENST00000566078 NECAP1Q8NC96 275 aa23.87■■□□□ 1.41
CTCF-203ENST00000566078 OR4X1Q8NH49 305 aa23.87■■□□□ 1.41
CTCF-203ENST00000566078 RNF141Q8WVD5 230 aa23.87■■□□□ 1.41
CTCF-203ENST00000566078 ZFP92A6NM28 416 aa23.86■■□□□ 1.41
CTCF-203ENST00000566078 H3BUA1 57 aa23.86■■□□□ 1.41
CTCF-203ENST00000566078 RAB14P61106 215 aa23.86■■□□□ 1.41
CTCF-203ENST00000566078 SERF2P84101 59 aa23.86■■□□□ 1.41
CTCF-203ENST00000566078 C15orf32Q32M92 178 aa23.86■■□□□ 1.41
CTCF-203ENST00000566078 FN1P02751 2386 aaKnown RBP23.86■■□□□ 1.41
CTCF-203ENST00000566078 IGKV1D-37A0A075B6S9 117 aa23.85■■□□□ 1.41
CTCF-203ENST00000566078 AKR1C8PQ5T2L2 129 aa23.85■■□□□ 1.41
CTCF-203ENST00000566078 JMJD8Q96S16 334 aa23.85■■□□□ 1.41
CTCF-203ENST00000566078 KCNIP2Q9NS61 270 aa23.85■■□□□ 1.41
CTCF-203ENST00000566078 PXMP4Q9Y6I8 212 aa23.85■■□□□ 1.41
CTCF-203ENST00000566078 TRGV3P03979 118 aa23.84■■□□□ 1.41
CTCF-203ENST00000566078 FFAR4Q5NUL3 377 aa23.84■■□□□ 1.41
CTCF-203ENST00000566078 MIC13Q5XKP0 118 aa23.84■■□□□ 1.41
CTCF-203ENST00000566078 C21orf62Q9NYP8 219 aa23.84■■□□□ 1.41
CTCF-203ENST00000566078 UMAD1C9J7I0 102 aa23.84■■□□□ 1.41
CTCF-203ENST00000566078 CRLF1O75462 422 aa23.84■■□□□ 1.41
CTCF-203ENST00000566078 IGLV1-40P01703 118 aa23.84■■□□□ 1.41
CTCF-203ENST00000566078 IGHV3-23P01764 117 aa23.84■■□□□ 1.41
CTCF-203ENST00000566078 MFAP4P55083 255 aa23.84■■□□□ 1.41
CTCF-203ENST00000566078 TPPP2P59282 170 aa23.84■■□□□ 1.41
CTCF-203ENST00000566078 VN1R17PQ8TDU5 208 aa23.84■■□□□ 1.41
CTCF-203ENST00000566078 NF1P21359 2839 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 TCRBV4S1A1TA0A5B7 111 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 FAM223BA6NKX1 122 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 ZNF705EA8MWA4 302 aaPredicted RBP23.83■■□□□ 1.41
CTCF-203ENST00000566078 CLN5O75503 358 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 BRI3O95415 125 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 PF4V1P10720 104 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 CYP2G1PQ6ZSU1 146 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 Q6ZSV7 163 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 ZNF329Q86UD4 541 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 FAM223AQ8IWN6 122 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 STPG3Q8N7X2 389 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 VSIRQ9H7M9 311 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 SLC45A2Q9UMX9 530 aa23.83■■□□□ 1.41
CTCF-203ENST00000566078 NMBP08949 121 aa23.82■■□□□ 1.4
CTCF-203ENST00000566078 RPL29P47914 159 aaKnown RBP23.82■■□□□ 1.4
CTCF-203ENST00000566078 NPBWR1P48145 328 aa23.82■■□□□ 1.4
CTCF-203ENST00000566078 RAB5CP51148 216 aa23.82■■□□□ 1.4
CTCF-203ENST00000566078 RPL15P61313 204 aaKnown RBP23.82■■□□□ 1.4
CTCF-203ENST00000566078 Q56UQ5 140 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms