RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 SAP30O75446 220 aa9.63□□□□□ -0.87
SHCBP1-204ENST00000565887 PTTG1O95997 202 aa9.63□□□□□ -0.87
SHCBP1-204ENST00000565887 IFNA4P05014 189 aa9.63□□□□□ -0.87
SHCBP1-204ENST00000565887 CTSGP08311 255 aa9.63□□□□□ -0.87
SHCBP1-204ENST00000565887 UBAC2Q8NBM4 344 aa9.63□□□□□ -0.87
SHCBP1-204ENST00000565887 OR4X1Q8NH49 305 aa9.63□□□□□ -0.87
SHCBP1-204ENST00000565887 MARC2Q969Z3 335 aa9.63□□□□□ -0.87
SHCBP1-204ENST00000565887 ZNF436Q9C0F3 470 aaPredicted RBP9.63□□□□□ -0.87
SHCBP1-204ENST00000565887 UFC1Q9Y3C8 167 aa9.63□□□□□ -0.87
SHCBP1-204ENST00000565887 NOTCH1P46531 2555 aa9.63□□□□□ -0.87
SHCBP1-204ENST00000565887 ZNF320A2RRD8 509 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 C5orf51A6NDU8 294 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 NDUFA4O00483 81 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 NXPH3O95157 252 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 TAS2R30P59541 319 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 GSG1LQ6UXU4 331 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 ZBTB8BQ8NAP8 495 aaPredicted RBP9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 TMEM116Q8NCL8 245 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 OR4D5Q8NGN0 318 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 OR2K2Q8NGT1 345 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 SMIM8Q96KF7 97 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 C2orf50Q96LR7 162 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 RAB40CQ96S21 281 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 SEC22CQ9BRL7 303 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 TECRQ9NZ01 308 aaKnown RBP9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 GSKIPQ9P0R6 139 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 S4R3C0 116 aa9.62□□□□□ -0.87
SHCBP1-204ENST00000565887 IGHV3-21A0A0B4J1V1 117 aa9.61□□□□□ -0.87
SHCBP1-204ENST00000565887 A8MWP6 167 aa9.61□□□□□ -0.87
SHCBP1-204ENST00000565887 K7EMT4 169 aa9.61□□□□□ -0.87
SHCBP1-204ENST00000565887 CLN5O75503 358 aa9.61□□□□□ -0.87
SHCBP1-204ENST00000565887 TMEM50AO95807 157 aa9.61□□□□□ -0.87
SHCBP1-204ENST00000565887 CYCSP99999 105 aaKnown RBP9.61□□□□□ -0.87
SHCBP1-204ENST00000565887 DEFA6Q01524 100 aa9.61□□□□□ -0.87
SHCBP1-204ENST00000565887 OR10C1Q96KK4 312 aa9.61□□□□□ -0.87
SHCBP1-204ENST00000565887 MRPL27Q9P0M9 148 aaKnown RBP9.61□□□□□ -0.87
SHCBP1-204ENST00000565887 STRAPQ9Y3F4 350 aaKnown RBP9.61□□□□□ -0.87
SHCBP1-204ENST00000565887 CMYA5Q8N3K9 4069 aa9.61□□□□□ -0.87
SHCBP1-204ENST00000565887 C15orf62A8K5M9 175 aa9.6□□□□□ -0.87
SHCBP1-204ENST00000565887 MPTX1A8MV57 137 aa9.6□□□□□ -0.87
SHCBP1-204ENST00000565887 FAM25EA8MYX2 175 aa9.6□□□□□ -0.87
SHCBP1-204ENST00000565887 F8W735 103 aaPredicted RBP9.6□□□□□ -0.87
SHCBP1-204ENST00000565887 SCAF4O95104 1147 aaKnown RBP9.6□□□□□ -0.87
SHCBP1-204ENST00000565887 IGLV1-51P01701 117 aa9.6□□□□□ -0.87
SHCBP1-204ENST00000565887 CSN3P07498 182 aa9.6□□□□□ -0.87
SHCBP1-204ENST00000565887 CD69Q07108 199 aa9.6□□□□□ -0.87
SHCBP1-204ENST00000565887 IL34Q6ZMJ4 242 aa9.6□□□□□ -0.87
SHCBP1-204ENST00000565887 MAGT1Q9H0U3 335 aa9.6□□□□□ -0.87
SHCBP1-204ENST00000565887 C2orf70A6NJV1 201 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 FABP1P07148 127 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 IAPPP10997 89 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 FOLR2P14207 255 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 PVALBP20472 110 aaPredicted RBP9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 CBLN1P23435 193 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 BMI1P35226 326 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 ADMP35318 185 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 POLR2GP62487 172 aaKnown RBP eCLIP9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 SPANXN5Q5MJ07 72 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 ZNF600Q6ZNG1 722 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 OR1S2Q8NGQ3 325 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 GINS3Q9BRX5 216 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 CHRDL1Q9BU40 450 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 FNDC4Q9H6D8 234 aaPredicted RBP9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 DAZ1Q9NQZ3 744 aaKnown RBP9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 PSENENQ9NZ42 101 aa9.59□□□□□ -0.87
SHCBP1-204ENST00000565887 TSC22D2O75157 780 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 RLN2P04090 185 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 CD5P06127 495 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 C8orf88P0DMB2 117 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 YPEL3P61236 119 aaPredicted RBP9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 MLANAQ16655 118 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 LCN12Q6JVE5 192 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 PRSS54Q6PEW0 395 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 DYNLRB2Q8TF09 96 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 Q8WTZ3 238 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 TMEM170AQ8WVE7 144 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 TMEM190Q8WZ59 177 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 SLC35E1Q96K37 410 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 ZC4H2Q9NQZ6 224 aa9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 ZNF256Q9Y2P7 627 aaPredicted RBP9.58□□□□□ -0.88
SHCBP1-204ENST00000565887 L7N2F9 121 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 SSNA1O43805 119 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 SSSCA1O60232 199 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 YIF1AO95070 293 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 SCGB1D2O95969 90 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 IGHV3-48P01763 117 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 MBPP02686 304 aaPredicted RBP9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 RND2P52198 227 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 KRTAP10-11P60412 298 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 VAMP2P63027 116 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 RGS21Q2M5E4 152 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 SLC16A13Q7RTY0 426 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 NPIPB3Q92617 1050 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 NMES1Q9C002 83 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 PAIP2BQ9ULR5 123 aaKnown RBP9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 SORL1Q92673 2214 aa9.57□□□□□ -0.88
SHCBP1-204ENST00000565887 TRAV14DV4A0A0A6YYC5 116 aa9.56□□□□□ -0.88
SHCBP1-204ENST00000565887 TRAV25A0A0B4J276 109 aa9.56□□□□□ -0.88
SHCBP1-204ENST00000565887 IGHV3-35A0A0C4DH35 117 aa9.56□□□□□ -0.88
SHCBP1-204ENST00000565887 TMEM213A2RRL7 107 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms