RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CENPVQ7Z7K6 275 aaPredicted RBP15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 KLK9Q9UKQ9 250 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 C17orf112F2Z3M2 114 aa15□□□□□ -0.01
CSPG4P13-201ENST00000565545 AKR1C1Q04828 323 aa15□□□□□ -0.01
CSPG4P13-201ENST00000565545 RAB31Q13636 194 aa15□□□□□ -0.01
CSPG4P13-201ENST00000565545 C9orf152Q5JTZ5 239 aa15□□□□□ -0.01
CSPG4P13-201ENST00000565545 BTNL8Q6UX41 500 aa15□□□□□ -0.01
CSPG4P13-201ENST00000565545 TREML4Q6UXN2 200 aa15□□□□□ -0.01
CSPG4P13-201ENST00000565545 RNF141Q8WVD5 230 aa15□□□□□ -0.01
CSPG4P13-201ENST00000565545 MISP3Q96FF7 219 aa15□□□□□ -0.01
CSPG4P13-201ENST00000565545 THYN1Q9P016 225 aa15□□□□□ -0.01
CSPG4P13-201ENST00000565545 UMAD1C9J7I0 102 aa14.99□□□□□ -0.01
CSPG4P13-201ENST00000565545 RAB5CP51148 216 aa14.99□□□□□ -0.01
CSPG4P13-201ENST00000565545 SERF2P84101 59 aa14.99□□□□□ -0.01
CSPG4P13-201ENST00000565545 GAMTQ14353 236 aa14.99□□□□□ -0.01
CSPG4P13-201ENST00000565545 TEPPQ6URK8 271 aa14.99□□□□□ -0.01
CSPG4P13-201ENST00000565545 ZNF709Q8N972 641 aa14.99□□□□□ -0.01
CSPG4P13-201ENST00000565545 OR2G3Q8NGZ4 309 aa14.99□□□□□ -0.01
CSPG4P13-201ENST00000565545 KCNIP2Q9NS61 270 aa14.99□□□□□ -0.01
CSPG4P13-201ENST00000565545 LSM4Q9Y4Z0 139 aaKnown RBP14.99□□□□□ -0.01
CSPG4P13-201ENST00000565545 IGLV11-55A0A075B6I3 123 aa14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 TRAV41A0A0B4J266 112 aa14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 SH2D7A6NKC9 451 aaPredicted RBP14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 TRIM77I1YAP6 450 aa14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 AP4M1O00189 453 aa14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 SULT1A2P50226 295 aa14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 BLCAPP62952 87 aa14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 ECSCRQ19T08 205 aa14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 CLLU1Q5K131 121 aa14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 NPCDR1Q9BY65 106 aa14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 NPFFR1Q9GZQ6 430 aa14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 FNDC4Q9H6D8 234 aaPredicted RBP14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 DMRT1Q9Y5R6 373 aa14.98□□□□□ -0.01
CSPG4P13-201ENST00000565545 LINC01548A6NM66 108 aa14.97□□□□□ -0.01
CSPG4P13-201ENST00000565545 MT-CO2P00403 227 aa14.97□□□□□ -0.01
CSPG4P13-201ENST00000565545 RUNX1Q01196 453 aa14.97□□□□□ -0.01
CSPG4P13-201ENST00000565545 C19orf54Q5BKX5 351 aa14.97□□□□□ -0.01
CSPG4P13-201ENST00000565545 OR5T1Q8NG75 326 aa14.97□□□□□ -0.01
CSPG4P13-201ENST00000565545 PRSS22Q9GZN4 317 aa14.97□□□□□ -0.01
CSPG4P13-201ENST00000565545 SH3BGRL3Q9H299 93 aa14.97□□□□□ -0.01
CSPG4P13-201ENST00000565545 I3L2K1 104 aa14.96□□□□□ -0.01
CSPG4P13-201ENST00000565545 BRI3O95415 125 aa14.96□□□□□ -0.01
CSPG4P13-201ENST00000565545 MLANAQ16655 118 aa14.96□□□□□ -0.01
CSPG4P13-201ENST00000565545 TMEM116Q8NCL8 245 aa14.96□□□□□ -0.01
CSPG4P13-201ENST00000565545 SAT2Q96F10 170 aaPredicted RBP14.96□□□□□ -0.01
CSPG4P13-201ENST00000565545 FANCD2OSQ96PS1 177 aa14.96□□□□□ -0.01
CSPG4P13-201ENST00000565545 JMJD8Q96S16 334 aa14.96□□□□□ -0.01
CSPG4P13-201ENST00000565545 RSG1Q9BU20 258 aa14.96□□□□□ -0.01
CSPG4P13-201ENST00000565545 TNFRSF19Q9NS68 423 aa14.96□□□□□ -0.01
CSPG4P13-201ENST00000565545 TMEM89A2RUT3 159 aa14.95□□□□□ -0.02
CSPG4P13-201ENST00000565545 H3BUA1 57 aa14.95□□□□□ -0.02
CSPG4P13-201ENST00000565545 CLDN34H7C241 214 aa14.95□□□□□ -0.02
CSPG4P13-201ENST00000565545 MBP02144 154 aa14.95□□□□□ -0.02
CSPG4P13-201ENST00000565545 CAMLGP49069 296 aa14.95□□□□□ -0.02
CSPG4P13-201ENST00000565545 FAM74A1Q5RGS3 127 aa14.95□□□□□ -0.02
CSPG4P13-201ENST00000565545 AKR1C8PQ5T2L2 129 aa14.95□□□□□ -0.02
CSPG4P13-201ENST00000565545 DPPA3Q6W0C5 159 aa14.95□□□□□ -0.02
CSPG4P13-201ENST00000565545 C19orf35Q6ZS72 473 aa14.95□□□□□ -0.02
CSPG4P13-201ENST00000565545 THAP8Q8NA92 274 aa14.95□□□□□ -0.02
CSPG4P13-201ENST00000565545 OR2T6Q8NHC8 308 aa14.95□□□□□ -0.02
CSPG4P13-201ENST00000565545 G3V318 75 aa14.94□□□□□ -0.02
CSPG4P13-201ENST00000565545 K7EIM0 57 aa14.94□□□□□ -0.02
CSPG4P13-201ENST00000565545 HILS1P60008 231 aa14.94□□□□□ -0.02
CSPG4P13-201ENST00000565545 BLOC1S1P78537 153 aa14.94□□□□□ -0.02
CSPG4P13-201ENST00000565545 TMEM182Q6ZP80 229 aaPredicted RBP14.94□□□□□ -0.02
CSPG4P13-201ENST00000565545 OR4X1Q8NH49 305 aa14.94□□□□□ -0.02
CSPG4P13-201ENST00000565545 ACY3Q96HD9 319 aa14.94□□□□□ -0.02
CSPG4P13-201ENST00000565545 MGST2Q99735 147 aa14.94□□□□□ -0.02
CSPG4P13-201ENST00000565545 PLA2G2EQ9NZK7 142 aa14.94□□□□□ -0.02
CSPG4P13-201ENST00000565545 TENM1Q9UKZ4 2725 aa14.93□□□□□ -0.02
CSPG4P13-201ENST00000565545 TRBV9A0A0B4J1U6 114 aa14.93□□□□□ -0.02
CSPG4P13-201ENST00000565545 AGPAT2O15120 278 aa14.93□□□□□ -0.02
CSPG4P13-201ENST00000565545 NMBP08949 121 aa14.93□□□□□ -0.02
CSPG4P13-201ENST00000565545 RPL29P47914 159 aaKnown RBP14.93□□□□□ -0.02
CSPG4P13-201ENST00000565545 RND2P52198 227 aa14.93□□□□□ -0.02
CSPG4P13-201ENST00000565545 NDUFA5Q16718 116 aa14.93□□□□□ -0.02
CSPG4P13-201ENST00000565545 VN1R17PQ8TDU5 208 aa14.93□□□□□ -0.02
CSPG4P13-201ENST00000565545 NPIPB3Q92617 1050 aa14.93□□□□□ -0.02
CSPG4P13-201ENST00000565545 GGTLC1Q9BX51 225 aa14.93□□□□□ -0.02
CSPG4P13-201ENST00000565545 PRH1P02810 166 aa14.92□□□□□ -0.02
CSPG4P13-201ENST00000565545 RPL15P61313 204 aaKnown RBP14.92□□□□□ -0.02
CSPG4P13-201ENST00000565545 ACSM6Q6P461 480 aa14.92□□□□□ -0.02
CSPG4P13-201ENST00000565545 Q6ZS46 218 aa14.92□□□□□ -0.02
CSPG4P13-201ENST00000565545 NECAP1Q8NC96 275 aa14.92□□□□□ -0.02
CSPG4P13-201ENST00000565545 TRGV9Q99603 122 aa14.92□□□□□ -0.02
CSPG4P13-201ENST00000565545 TXN2Q99757 166 aa14.92□□□□□ -0.02
CSPG4P13-201ENST00000565545 FBXL7Q9UJT9 491 aa14.92□□□□□ -0.02
CSPG4P13-201ENST00000565545 MGAM2Q2M2H8 2515 aa14.92□□□□□ -0.02
CSPG4P13-201ENST00000565545 TRAV30A0A087WSZ9 112 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 DNAJC9-AS1A6NH13 148 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 ZNF705EA8MWA4 302 aaPredicted RBP14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 OR2J3O76001 311 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 TSPAN15O95858 294 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 PPIFP30405 207 aaKnown RBP14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 OR10J1P30954 320 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 FCGR2BP31994 310 aaPredicted RBP14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 NPBWR1P48145 328 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 MFAP4P55083 255 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 SELENOTP62341 195 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 TMEM41BQ5BJD5 291 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms