RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 RPL22P35268 128 aaKnown RBP1.21□□□□□ -2.22
PALB2-203ENST00000565038 IFNGR2P38484 337 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 H2BFSP57053 126 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 AP1S1P61966 158 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 HPCAP84074 193 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 SS18Q15532 418 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 DEFB110Q30KQ9 67 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 DRAM2Q6UX65 266 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 FAM151BQ6UXP7 276 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 Q6ZSA8 131 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 BAP18Q8IXM2 172 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 TMEM251Q8N6I4 163 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 OR52E4Q8NGH9 312 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 CD200R1Q8TD46 325 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 GPR119Q8TDV5 335 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 C1orf54Q8WWF1 131 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 PSMF1Q92530 271 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 TLCD1Q96CP7 247 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 ACY3Q96HD9 319 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 CAPZA3Q96KX2 299 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 DNAJC30Q96LL9 226 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 LYSMD1Q96S90 227 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 MGLLQ99685 303 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 OR51B6Q9H340 312 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 SNX12Q9UMY4 172 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 APCP25054 2843 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 ANKRD17O75179 2603 aaKnown RBP1.21□□□□□ -2.22
PALB2-203ENST00000565038 TRPM6Q9BX84 2022 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 TSC2P49815 1807 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 TNRC6BQ9UPQ9 1833 aaKnown RBP1.21□□□□□ -2.22
PALB2-203ENST00000565038 MED13Q9UHV7 2174 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 CNTRLQ7Z7A1 2325 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 TCHHQ07283 1943 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 CCDC168Q8NDH2 2452 aa1.21□□□□□ -2.22
PALB2-203ENST00000565038 ACANP16112 2415 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 OBSL1O75147 1896 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 NUP210Q8TEM1 1887 aaPredicted RBP1.2□□□□□ -2.22
PALB2-203ENST00000565038 DCHS2Q6V1P9 2916 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 OTOGQ6ZRI0 2925 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 KMT2CQ8NEZ4 4911 aaKnown RBP1.2□□□□□ -2.22
PALB2-203ENST00000565038 A0A0A6YYH2 397 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 A0A1W2PQL4 384 aaPredicted RBP1.2□□□□□ -2.22
PALB2-203ENST00000565038 A6NJ64 397 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 FNDC10F2Z333 226 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 H3BRN7 92 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 H3BSA7 217 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 UBE2L6O14933 153 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 BIRC5O15392 142 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 BANF1O75531 89 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 PIAS1O75925 651 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 TYMSP04818 313 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 ESDP10768 282 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 CDK2P24941 298 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 LPAR6P43657 344 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 OR1E2P47887 323 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 DAD1P61803 113 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 HERVK_113P63121 156 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 BTG2P78543 158 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 TMEM267Q0VDI3 215 aaPredicted RBP1.2□□□□□ -2.22
PALB2-203ENST00000565038 PPP1R1AQ13522 171 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 POU6F1Q14863 301 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 FAM229BQ4G0N7 80 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 DNM1P34Q6PK57 102 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 SDIM1Q6ZPB5 146 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 TRAPPC5Q8IUR0 188 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 OR11H1Q8NG94 326 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 CMTM5Q96DZ9 223 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 ZNF625Q96I27 306 aaPredicted RBP1.2□□□□□ -2.22
PALB2-203ENST00000565038 CCDC42Q96M95 316 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 KCTD7Q96MP8 289 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 PRAP1Q96NZ9 151 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 DHRS9Q9BPW9 319 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 DDA1Q9BW61 102 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 ULBP3Q9BZM4 244 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 DERL2Q9GZP9 239 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 MS4A6AQ9H2W1 248 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 PLEKHJ1Q9NW61 149 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 MRPS16Q9Y3D3 137 aaKnown RBP1.2□□□□□ -2.22
PALB2-203ENST00000565038 MINOS1-NBL1R4GNA1 71 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 ANK2Q01484 3957 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 POLEQ07864 2286 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 MYLKQ15746 1914 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 CEP192Q8TEP8 1941 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 SPTBN1Q01082 2364 aaKnown RBP1.2□□□□□ -2.22
PALB2-203ENST00000565038 CUBNO60494 3623 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 DOPEY1Q5JWR5 2465 aa1.2□□□□□ -2.22
PALB2-203ENST00000565038 ABCA2Q9BZC7 2435 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 RYR1P21817 5038 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 NAV3Q8IVL0 2385 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 HYDINQ4G0P3 5121 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 TRRAPQ9Y4A5 3859 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 CXorf51AA0A1B0GTR3 108 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 OR5K4A6NMS3 321 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 H0YGG7 62 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 GOLGA6L19H0YKK7 550 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 PFDN6O15212 129 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 DENRO43583 198 aaKnown RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 GSTZ1O43708 216 aaPredicted RBP1.19□□□□□ -2.22
PALB2-203ENST00000565038 SSNA1O43805 119 aa1.19□□□□□ -2.22
PALB2-203ENST00000565038 NIPSNAP2O75323 286 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms