RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CSMD2Q7Z408 3487 aa15.49■□□□□ 0.07
CLN6-205ENST00000564846 C9JQL5 133 aa15.48■□□□□ 0.07
CLN6-205ENST00000564846 F8W036 122 aa15.48■□□□□ 0.07
CLN6-205ENST00000564846 MT-CO2P00403 227 aa15.48■□□□□ 0.07
CLN6-205ENST00000564846 APOC3P02656 99 aa15.48■□□□□ 0.07
CLN6-205ENST00000564846 SFTA3P0C7M3 94 aa15.48■□□□□ 0.07
CLN6-205ENST00000564846 LINC00869P0C866 280 aa15.48■□□□□ 0.07
CLN6-205ENST00000564846 C10orf91Q5T1B1 145 aa15.48■□□□□ 0.07
CLN6-205ENST00000564846 TTC9CQ8N5M4 171 aa15.48■□□□□ 0.07
CLN6-205ENST00000564846 TMEM116Q8NCL8 245 aa15.48■□□□□ 0.07
CLN6-205ENST00000564846 ABCA12Q86UK0 2595 aa15.48■□□□□ 0.07
CLN6-205ENST00000564846 ADCYAP1P18509 176 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 RND2P52198 227 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 HAGHQ16775 308 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 ZNF506Q5JVG8 444 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 CYP2G1PQ6ZSU1 146 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 SSX3Q99909 188 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 GNG13Q9P2W3 67 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 CARHSP1Q9Y2V2 147 aaKnown RBP15.47■□□□□ 0.07
CLN6-205ENST00000564846 ZFP92A6NM28 416 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 IFNA1P01562 189 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 IGHV3-48P01763 117 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 PPT1P50897 306 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 SELENOTP62341 195 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 ASPHD1Q5U4P2 390 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 RARRES2Q99969 163 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 C19orf24Q9BVV8 132 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 MRPL36Q9P0J6 103 aaKnown RBP15.47■□□□□ 0.07
CLN6-205ENST00000564846 MOB4Q9Y3A3 225 aa15.47■□□□□ 0.07
CLN6-205ENST00000564846 HELZ2Q9BYK8 2649 aaKnown RBP15.46■□□□□ 0.07
CLN6-205ENST00000564846 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.46■□□□□ 0.072e-6■■□□□ 13.6
CLN6-205ENST00000564846 TCRBV4S1A1TA0A5B7 111 aa15.46■□□□□ 0.07
CLN6-205ENST00000564846 I3L2K1 104 aa15.46■□□□□ 0.07
CLN6-205ENST00000564846 HMGB3O15347 200 aaKnown RBP15.46■□□□□ 0.07
CLN6-205ENST00000564846 RHOBP62745 196 aa15.46■□□□□ 0.07
CLN6-205ENST00000564846 KHDC3LQ587J8 217 aa15.46■□□□□ 0.07
CLN6-205ENST00000564846 C5orf56Q8N8D9 126 aa15.46■□□□□ 0.07
CLN6-205ENST00000564846 SLC35B3Q9H1N7 401 aa15.46■□□□□ 0.07
CLN6-205ENST00000564846 APCP25054 2843 aa15.45■□□□□ 0.06
CLN6-205ENST00000564846 IGKV1D-37A0A075B6S9 117 aa15.45■□□□□ 0.06
CLN6-205ENST00000564846 BCL2P10415 239 aa15.45■□□□□ 0.06
CLN6-205ENST00000564846 EGR2P11161 476 aaPredicted RBP15.45■□□□□ 0.06
CLN6-205ENST00000564846 RBMS3Q6XE24 437 aaKnown RBP15.45■□□□□ 0.06
CLN6-205ENST00000564846 HSPB9Q9BQS6 159 aa15.45■□□□□ 0.06
CLN6-205ENST00000564846 SVEP1Q4LDE5 3571 aa15.45■□□□□ 0.06
CLN6-205ENST00000564846 LOC102723971A0A1B0GUV8 181 aa15.44■□□□□ 0.06
CLN6-205ENST00000564846 EIF3GO75821 320 aaKnown RBP eCLIP15.44■□□□□ 0.06
CLN6-205ENST00000564846 HSPB1P04792 205 aaKnown RBP15.44■□□□□ 0.06
CLN6-205ENST00000564846 ICAM4Q14773 271 aa15.44■□□□□ 0.06
CLN6-205ENST00000564846 SGMS2Q8NHU3 365 aa15.44■□□□□ 0.06
CLN6-205ENST00000564846 TRGV9Q99603 122 aa15.44■□□□□ 0.06
CLN6-205ENST00000564846 STAG3L2P0CL84 134 aa15.44■□□□□ 0.06
CLN6-205ENST00000564846 STAG3L3P0CL85 134 aa15.44■□□□□ 0.06
CLN6-205ENST00000564846 TAGLN2P37802 199 aaKnown RBP15.44■□□□□ 0.06
CLN6-205ENST00000564846 DEFA5Q01523 94 aa15.44■□□□□ 0.06
CLN6-205ENST00000564846 SLC35E3Q7Z769 313 aa15.44■□□□□ 0.06
CLN6-205ENST00000564846 SVBPQ8N300 66 aa15.44■□□□□ 0.06
CLN6-205ENST00000564846 OR4X1Q8NH49 305 aa15.44■□□□□ 0.06
CLN6-205ENST00000564846 SOX21Q9Y651 276 aaPredicted RBP15.44■□□□□ 0.06
CLN6-205ENST00000564846 IGLV11-55A0A075B6I3 123 aa15.43■□□□□ 0.06
CLN6-205ENST00000564846 K7EIM0 57 aa15.43■□□□□ 0.06
CLN6-205ENST00000564846 GATA2P23769 480 aaPredicted RBP15.43■□□□□ 0.06
CLN6-205ENST00000564846 PSMB3P49720 205 aa15.43■□□□□ 0.06
CLN6-205ENST00000564846 CYB5R2Q6BCY4 276 aa15.43■□□□□ 0.06
CLN6-205ENST00000564846 TMEM219Q86XT9 240 aa15.43■□□□□ 0.06
CLN6-205ENST00000564846 RXFP4Q8TDU9 374 aa15.43■□□□□ 0.06
CLN6-205ENST00000564846 TMEM68Q96MH6 324 aa15.43■□□□□ 0.06
CLN6-205ENST00000564846 SEPSECSQ9HD40 501 aaKnown RBP15.43■□□□□ 0.06
CLN6-205ENST00000564846 TNFRSF19Q9NS68 423 aa15.43■□□□□ 0.06
CLN6-205ENST00000564846 VAX2Q9UIW0 290 aa15.43■□□□□ 0.06
CLN6-205ENST00000564846 PITPNC1Q9UKF7 332 aa15.43■□□□□ 0.06
CLN6-205ENST00000564846 IGHV3-21A0A0B4J1V1 117 aa15.42■□□□□ 0.06
CLN6-205ENST00000564846 H3BUX3 64 aa15.42■□□□□ 0.06
CLN6-205ENST00000564846 FANCD2OSQ96PS1 177 aa15.42■□□□□ 0.06
CLN6-205ENST00000564846 TMPRSS5Q9H3S3 457 aa15.42■□□□□ 0.06
CLN6-205ENST00000564846 MANBALQ9NQG1 85 aa15.42■□□□□ 0.06
CLN6-205ENST00000564846 THYN1Q9P016 225 aa15.42■□□□□ 0.06
CLN6-205ENST00000564846 A6NDX4 124 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 CXorf1O96002 111 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 ZNF90Q03938 601 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 FAM78BQ5VT40 261 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 NANPQ8TBE9 248 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 GATAD1Q8WUU5 269 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 NBPF19A0A087WUL8 3843 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 MAP1AP78559 2803 aaPredicted RBP15.41■□□□□ 0.06
CLN6-205ENST00000564846 ATP6V0E1O15342 81 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 SRP19P09132 144 aaKnown RBP15.41■□□□□ 0.06
CLN6-205ENST00000564846 OR5G3P0C626 314 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 IQCF2Q8IXL9 164 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 RNF2Q99496 336 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 FUT9Q9Y231 359 aa15.41■□□□□ 0.06
CLN6-205ENST00000564846 M0QZK8 103 aa15.4■□□□□ 0.06
CLN6-205ENST00000564846 FSHBP01225 129 aa15.4■□□□□ 0.06
CLN6-205ENST00000564846 OR5T1Q8NG75 326 aa15.4■□□□□ 0.06
CLN6-205ENST00000564846 OR1L4Q8NGR5 311 aa15.4■□□□□ 0.06
CLN6-205ENST00000564846 FAM110DQ8TAY7 271 aaPredicted RBP15.4■□□□□ 0.06
CLN6-205ENST00000564846 PFDN5Q99471 154 aa15.4■□□□□ 0.06
CLN6-205ENST00000564846 TMUB1Q9BVT8 246 aa15.4■□□□□ 0.06
CLN6-205ENST00000564846 MRPL32Q9BYC8 188 aaKnown RBP15.4■□□□□ 0.06
CLN6-205ENST00000564846 DNAJC4Q9NNZ3 241 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms