RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 C11orf68Q9H3H3 251 aaKnown RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 PNRC2Q9NPJ4 139 aaKnown RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 AURKAIP1Q9NWT8 199 aaPredicted RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 SEMA5BQ9P283 1151 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 FAM90A27PA6NNH2 459 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 GPR183P32249 361 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 P2RY4P51582 365 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 CRYBA4P53673 196 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 FAM90A2PQ658T7 463 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 SLC25A26Q70HW3 274 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 PRSS33Q8NF86 280 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 CHCHD1Q96BP2 118 aaKnown RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 OR4C12Q96R67 309 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 GNB1LQ9BYB4 327 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 PDZD2O15018 2839 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 MARCH11A6NNE9 402 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 YPEL1O60688 119 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 CAMPP49913 170 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 ZNF787Q6DD87 383 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 ASCL4Q6XD76 172 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 EEF1AKMT3Q96AZ1 226 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 IMMP1LQ96LU5 166 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 SEPSECSQ9HD40 501 aaKnown RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 ZNF355PQ9NSJ1 428 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 PSENENQ9NZ42 101 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 COX11Q9Y6N1 276 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 S4R3C0 116 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 IGLV3-12A0A075B6K2 115 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 DKK1O94907 266 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 PPOXP50336 477 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 MFAP4P55083 255 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 RIPPLY3P57055 190 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 OR5A1Q8NGJ0 315 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 OR51G1Q8NGK1 321 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 PARLQ9H300 379 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 NBASA2RRP1 2371 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 LOC102723971A0A1B0GUV8 181 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 ATP5G1P05496 136 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 PDE6GP18545 87 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 VDAC2P45880 294 aaPredicted RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 RPS10P46783 165 aaKnown RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 ATP5G3P48201 142 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 REG1BP48304 166 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 ATP5G2Q06055 141 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 CXorf66Q5JRM2 361 aaPredicted RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 OR9G1Q8NH87 305 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 PLPPR1Q8TBJ4 325 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 TMEM230Q96A57 120 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 ABHD17AQ96GS6 310 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 COL6A6A6NMZ7 2263 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 TRAV1-1A0A0B4J248 108 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 TRGV8A0A0C4DH27 118 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 SNURFLB1AK76 121 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 NPIPB11E5RHQ5 1161 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 SPRY3O43610 288 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 ZNRF1Q8ND25 227 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 DYNLRB2Q8TF09 96 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 VPS25Q9BRG1 176 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 TRBV6-6A0A0A6YYG2 114 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 M0R1B8 84 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 IL6RP08887 468 aaPredicted RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 MDKP21741 143 aaPredicted RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 ZFP36L1Q07352 338 aaKnown RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 KLF17Q5JT82 389 aaPredicted RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 BHLHA15Q7RTS1 189 aaPredicted RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 MDP1Q86V88 176 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 TMEM256Q8N2U0 113 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 ITPR3Q14573 2671 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 EPG5Q9HCE0 2579 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 M0R1X1 148 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 PPYP01298 95 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 C1QTNF9P0C862 333 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 SCGB1D4Q6XE38 83 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 OR8I2Q8N0Y5 310 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 OR4P4Q8NGL7 312 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 CLDND2Q8NHS1 167 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 OGG1O15527 345 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 PLAUP00749 431 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 PMS2P11Q13670 270 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 MSMPQ1L6U9 139 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 TMEM155Q4W5P6 130 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 LDLRAD3Q86YD5 345 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 OR1N2Q8NGR9 330 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 ZNF418Q8TF45 676 aaPredicted RBP2.8□□□□□ -1.96
CHD9-213ENST00000564845 C15orf61A6NNL5 157 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 ZNF705GA8MUZ8 300 aaPredicted RBP2.8□□□□□ -1.96
CHD9-213ENST00000564845 NDUFS7O75251 213 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 CCL8P80075 99 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 C1orf194Q5T5A4 169 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 ATRAIDQ6UW56 229 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 OR5AU1Q8NGC0 362 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 PHLDA3Q9Y5J5 127 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 TENM1Q9UKZ4 2725 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 ROS1P08922 2347 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 TGIF2-C20orf24A0A0A6YYL0 155 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 IGHV3-72A0A0B4J1Y9 119 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 A0A1B0GV72 72 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 COX6B1P14854 86 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 CXCL5P42830 114 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms