RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 PVRIGQ6DKI7 326 aa13.79□□□□□ -0.2
SYNGR3-204ENST00000564642 LAMTOR1Q6IAA8 161 aa13.79□□□□□ -0.2
SYNGR3-204ENST00000564642 SHPKQ9UHJ6 478 aa13.79□□□□□ -0.2
SYNGR3-204ENST00000564642 NXPH3O95157 252 aa13.78□□□□□ -0.2
SYNGR3-204ENST00000564642 CCR6P51684 374 aa13.78□□□□□ -0.2
SYNGR3-204ENST00000564642 TRIQKQ629K1 86 aa13.78□□□□□ -0.2
SYNGR3-204ENST00000564642 LYZL2Q7Z4W2 148 aa13.78□□□□□ -0.2
SYNGR3-204ENST00000564642 DEFB125Q8N687 156 aa13.78□□□□□ -0.2
SYNGR3-204ENST00000564642 TM2D3Q9BRN9 247 aa13.78□□□□□ -0.2
SYNGR3-204ENST00000564642 HIPK2Q9H2X6 1198 aa13.78□□□□□ -0.2
SYNGR3-204ENST00000564642 TMEM50AO95807 157 aa13.77□□□□□ -0.21
SYNGR3-204ENST00000564642 VAMP1P23763 118 aa13.77□□□□□ -0.21
SYNGR3-204ENST00000564642 SMCO1Q147U7 214 aa13.77□□□□□ -0.21
SYNGR3-204ENST00000564642 HAGHQ16775 308 aa13.77□□□□□ -0.21
SYNGR3-204ENST00000564642 BSXQ3C1V8 233 aa13.77□□□□□ -0.21
SYNGR3-204ENST00000564642 TRAV14DV4A0A0A6YYC5 116 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 RPS10-NUDT3A0A1W2PQS6 291 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 SCGB2A1O75556 95 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 RBMS2Q15434 407 aaKnown RBP13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 BAK1Q16611 211 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 MLANAQ16655 118 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 C2orf83Q53S99 150 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 NMSQ5H8A3 153 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 TMEM116Q8NCL8 245 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 OR10C1Q96KK4 312 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 SPAG8Q99932 426 aaPredicted RBP13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 WFDC10AQ9H1F0 79 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 SRD5A3Q9H8P0 318 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 SMPXQ9UHP9 88 aa13.76□□□□□ -0.21
SYNGR3-204ENST00000564642 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 DUXBA0A1W2PPF3 345 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 NAP1L6A6NFF2 107 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 TSPAN4O14817 238 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 ZNF600Q6ZNG1 722 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 NOXA1Q86UR1 476 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 CENPSQ8N2Z9 138 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 SLC24A4Q8NFF2 622 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 OR4X1Q8NH49 305 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 OR1S1Q8NH92 325 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 SPATA25Q9BR10 227 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 GINS3Q9BRX5 216 aa13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 FNDC4Q9H6D8 234 aaPredicted RBP13.75□□□□□ -0.21
SYNGR3-204ENST00000564642 A0A1B0GU03 582 aa13.74□□□□□ -0.21
SYNGR3-204ENST00000564642 CENPXA8MT69 81 aa13.74□□□□□ -0.21
SYNGR3-204ENST00000564642 CLN5O75503 358 aa13.74□□□□□ -0.21
SYNGR3-204ENST00000564642 SFT2D2O95562 160 aa13.74□□□□□ -0.21
SYNGR3-204ENST00000564642 TNFRSF9Q07011 255 aa13.74□□□□□ -0.21
SYNGR3-204ENST00000564642 RNASEH2CQ8TDP1 164 aaKnown RBP13.74□□□□□ -0.21
SYNGR3-204ENST00000564642 ZNF414Q96IQ9 312 aa13.74□□□□□ -0.21
SYNGR3-204ENST00000564642 RHPN1-AS1Q9BWJ2 59 aa13.74□□□□□ -0.21
SYNGR3-204ENST00000564642 PUS1Q9Y606 427 aaKnown RBP eCLIP13.74□□□□□ -0.21
SYNGR3-204ENST00000564642 TRAV30A0A087WSZ9 112 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 IGHV3-49A0A0A0MS15 119 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 LINC00854A0A1B0GVQ3 168 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 RBMY1BA6NDE4 496 aaKnown RBP13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 RBMY1EA6NEQ0 496 aaKnown RBP13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 CHEK1O14757 476 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 IFNA10P01566 189 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 RBMY1DP0C7P1 496 aaKnown RBP13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 NPY1RP25929 384 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 BMI1P35226 326 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 ETFRF1Q6IPR1 90 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 TOMM20LQ6UXN7 152 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 LINC00322Q6ZN03 302 aaPredicted RBP13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 DTD1Q8TEA8 209 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 RBKSQ9H477 322 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 HSPB7Q9UBY9 170 aa13.73□□□□□ -0.21
SYNGR3-204ENST00000564642 SLC25A4P12235 298 aa13.72□□□□□ -0.21
SYNGR3-204ENST00000564642 PPP1R1AQ13522 171 aa13.72□□□□□ -0.21
SYNGR3-204ENST00000564642 LRTM2Q8N967 370 aa13.72□□□□□ -0.21
SYNGR3-204ENST00000564642 RNF2Q99496 336 aa13.72□□□□□ -0.21
SYNGR3-204ENST00000564642 SDHCQ99643 169 aaPredicted RBP13.72□□□□□ -0.21
SYNGR3-204ENST00000564642 MRPL36Q9P0J6 103 aaKnown RBP13.72□□□□□ -0.21
SYNGR3-204ENST00000564642 U3KQ87 197 aa13.72□□□□□ -0.21
SYNGR3-204ENST00000564642 EPPK1P58107 5090 aaKnown RBP13.72□□□□□ -0.21
SYNGR3-204ENST00000564642 OR4C46A6NHA9 309 aa13.71□□□□□ -0.21
SYNGR3-204ENST00000564642 NDUFB6O95139 128 aa13.71□□□□□ -0.21
SYNGR3-204ENST00000564642 UBE2MP61081 183 aaKnown RBP13.71□□□□□ -0.21
SYNGR3-204ENST00000564642 IGHV3OR16-13A0A075B7E8 117 aa13.7□□□□□ -0.22
SYNGR3-204ENST00000564642 IGHV3-74A0A0B4J1X5 117 aa13.7□□□□□ -0.22
SYNGR3-204ENST00000564642 SLC25A6P12236 298 aa13.7□□□□□ -0.22
SYNGR3-204ENST00000564642 C7orf50Q9BRJ6 194 aaKnown RBP13.7□□□□□ -0.22
SYNGR3-204ENST00000564642 ZFAND3Q9H8U3 227 aa13.7□□□□□ -0.22
SYNGR3-204ENST00000564642 UBQLN2Q9UHD9 624 aa13.7□□□□□ -0.22
SYNGR3-204ENST00000564642 TMED3Q9Y3Q3 217 aa13.7□□□□□ -0.22
SYNGR3-204ENST00000564642 CD5P06127 495 aa13.69□□□□□ -0.22
SYNGR3-204ENST00000564642 HOXB5P09067 269 aa13.69□□□□□ -0.22
SYNGR3-204ENST00000564642 IL7P13232 177 aa13.69□□□□□ -0.22
SYNGR3-204ENST00000564642 NPPCP23582 126 aa13.69□□□□□ -0.22
SYNGR3-204ENST00000564642 RND2P52198 227 aa13.69□□□□□ -0.22
SYNGR3-204ENST00000564642 TIGITQ495A1 244 aa13.69□□□□□ -0.22
SYNGR3-204ENST00000564642 PRSS54Q6PEW0 395 aa13.69□□□□□ -0.22
SYNGR3-204ENST00000564642 OR1S2Q8NGQ3 325 aa13.69□□□□□ -0.22
SYNGR3-204ENST00000564642 TMEM170AQ8WVE7 144 aa13.69□□□□□ -0.22
SYNGR3-204ENST00000564642 TENM3Q9P273 2699 aa13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 IGKV3-7A0A075B6H7 116 aa13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 LOC102724200A0A096LPH7 203 aaPredicted RBP13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 PITX3O75364 302 aa13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 MED6O75586 246 aa13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 IFNA4P05014 189 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms