RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 SYNJ2BPP57105 145 aa12.77□□□□□ -0.37
RNF40-206ENST00000564260 BEAN1Q3B7T3 259 aa12.77□□□□□ -0.37
RNF40-206ENST00000564260 Q56UQ5 140 aa12.77□□□□□ -0.37
RNF40-206ENST00000564260 GSG1LQ6UXU4 331 aa12.77□□□□□ -0.37
RNF40-206ENST00000564260 TMEM116Q8NCL8 245 aa12.77□□□□□ -0.37
RNF40-206ENST00000564260 MARC2Q969Z3 335 aa12.77□□□□□ -0.37
RNF40-206ENST00000564260 PINX1Q96BK5 328 aaKnown RBP12.77□□□□□ -0.37
RNF40-206ENST00000564260 OR10C1Q96KK4 312 aa12.77□□□□□ -0.37
RNF40-206ENST00000564260 C2orf50Q96LR7 162 aa12.77□□□□□ -0.37
RNF40-206ENST00000564260 C7orf66A4D0T2 115 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 OR2T8A6NH00 312 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 MPTX1A8MV57 137 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 PPP5D1E7EU14 171 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 G3V4G9 280 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 GNG7O60262 68 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 CTSGP08311 255 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 CYCSP99999 105 aaKnown RBP12.76□□□□□ -0.37
RNF40-206ENST00000564260 RGS21Q2M5E4 152 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 OXLD1Q5BKU9 147 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 OR2K2Q8NGT1 345 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 SMIM8Q96KF7 97 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 UFC1Q9Y3C8 167 aa12.76□□□□□ -0.37
RNF40-206ENST00000564260 C5orf51A6NDU8 294 aa12.75□□□□□ -0.37
RNF40-206ENST00000564260 TSC22D2O75157 780 aa12.75□□□□□ -0.37
RNF40-206ENST00000564260 CLN5O75503 358 aa12.75□□□□□ -0.37
RNF40-206ENST00000564260 NXPH3O95157 252 aa12.75□□□□□ -0.37
RNF40-206ENST00000564260 OR2C1O95371 312 aa12.75□□□□□ -0.37
RNF40-206ENST00000564260 IGHV3-23P01764 117 aa12.75□□□□□ -0.37
RNF40-206ENST00000564260 IFNA4P05014 189 aa12.75□□□□□ -0.37
RNF40-206ENST00000564260 CD69Q07108 199 aa12.75□□□□□ -0.37
RNF40-206ENST00000564260 UXS1Q8NBZ7 420 aa12.75□□□□□ -0.37
RNF40-206ENST00000564260 TMEM170AQ8WVE7 144 aa12.75□□□□□ -0.37
RNF40-206ENST00000564260 FNDC4Q9H6D8 234 aaPredicted RBP12.75□□□□□ -0.37
RNF40-206ENST00000564260 STRAPQ9Y3F4 350 aaKnown RBP12.75□□□□□ -0.37
RNF40-206ENST00000564260 C15orf62A8K5M9 175 aa12.74□□□□□ -0.37
RNF40-206ENST00000564260 K7EMT4 169 aa12.74□□□□□ -0.37
RNF40-206ENST00000564260 SAP30O75446 220 aa12.74□□□□□ -0.37
RNF40-206ENST00000564260 UBAC2Q8NBM4 344 aa12.74□□□□□ -0.37
RNF40-206ENST00000564260 TMEM190Q8WZ59 177 aa12.74□□□□□ -0.37
RNF40-206ENST00000564260 NMES1Q9C002 83 aa12.74□□□□□ -0.37
RNF40-206ENST00000564260 TECRQ9NZ01 308 aaKnown RBP12.74□□□□□ -0.37
RNF40-206ENST00000564260 GSKIPQ9P0R6 139 aa12.74□□□□□ -0.37
RNF40-206ENST00000564260 S4R3C0 116 aa12.74□□□□□ -0.37
RNF40-206ENST00000564260 NOTCH3Q9UM47 2321 aa12.74□□□□□ -0.37
RNF40-206ENST00000564260 NOTCH1P46531 2555 aa12.73□□□□□ -0.37
RNF40-206ENST00000564260 TMEM50AO95807 157 aa12.73□□□□□ -0.37
RNF40-206ENST00000564260 IGLV1-51P01701 117 aa12.73□□□□□ -0.37
RNF40-206ENST00000564260 PVALBP20472 110 aaPredicted RBP12.73□□□□□ -0.37
RNF40-206ENST00000564260 ADMP35318 185 aa12.73□□□□□ -0.37
RNF40-206ENST00000564260 POLR2GP62487 172 aaKnown RBP eCLIP12.73□□□□□ -0.37
RNF40-206ENST00000564260 PRSS54Q6PEW0 395 aa12.73□□□□□ -0.37
RNF40-206ENST00000564260 ZNF600Q6ZNG1 722 aa12.73□□□□□ -0.37
RNF40-206ENST00000564260 OR1S2Q8NGQ3 325 aa12.73□□□□□ -0.37
RNF40-206ENST00000564260 MAGT1Q9H0U3 335 aa12.73□□□□□ -0.37
RNF40-206ENST00000564260 DAZ1Q9NQZ3 744 aaKnown RBP12.73□□□□□ -0.37
RNF40-206ENST00000564260 FAM25EA8MYX2 175 aa12.72□□□□□ -0.37
RNF40-206ENST00000564260 FNDC10F2Z333 226 aa12.72□□□□□ -0.37
RNF40-206ENST00000564260 SSSCA1O60232 199 aa12.72□□□□□ -0.37
RNF40-206ENST00000564260 MBPP02686 304 aaPredicted RBP12.72□□□□□ -0.37
RNF40-206ENST00000564260 CSN3P07498 182 aa12.72□□□□□ -0.37
RNF40-206ENST00000564260 IAPPP10997 89 aa12.72□□□□□ -0.37
RNF40-206ENST00000564260 IL15RAQ13261 267 aa12.72□□□□□ -0.37
RNF40-206ENST00000564260 IL34Q6ZMJ4 242 aa12.72□□□□□ -0.37
RNF40-206ENST00000564260 SLC16A13Q7RTY0 426 aa12.72□□□□□ -0.37
RNF40-206ENST00000564260 CHRDL1Q9BU40 450 aa12.72□□□□□ -0.37
RNF40-206ENST00000564260 PSENENQ9NZ42 101 aa12.72□□□□□ -0.37
RNF40-206ENST00000564260 MRPL27Q9P0M9 148 aaKnown RBP12.72□□□□□ -0.37
RNF40-206ENST00000564260 MEGF8Q7Z7M0 2845 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 IGHV3-21A0A0B4J1V1 117 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 C2orf70A6NJV1 201 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 CCSO14618 274 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 SSNA1O43805 119 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 FABP1P07148 127 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 C8orf88P0DMB2 117 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 BMI1P35226 326 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 YPEL3P61236 119 aaPredicted RBP12.71□□□□□ -0.37
RNF40-206ENST00000564260 SPANXN5Q5MJ07 72 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 ASB13Q8WXK3 278 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 SLC35E1Q96K37 410 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 GINS3Q9BRX5 216 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 GGACTQ9BVM4 153 aa12.71□□□□□ -0.37
RNF40-206ENST00000564260 RCL1Q9Y2P8 373 aaKnown RBP12.71□□□□□ -0.37
RNF40-206ENST00000564260 ZNF320A2RRD8 509 aa12.7□□□□□ -0.38
RNF40-206ENST00000564260 TMEM213A2RRL7 107 aa12.7□□□□□ -0.38
RNF40-206ENST00000564260 L7N2F9 121 aa12.7□□□□□ -0.38
RNF40-206ENST00000564260 SCGB1D2O95969 90 aa12.7□□□□□ -0.38
RNF40-206ENST00000564260 CD5P06127 495 aa12.7□□□□□ -0.38
RNF40-206ENST00000564260 IGLC1P0CG04 106 aa12.7□□□□□ -0.38
RNF40-206ENST00000564260 VAMP2P63027 116 aa12.7□□□□□ -0.38
RNF40-206ENST00000564260 OXA1LQ15070 435 aa12.7□□□□□ -0.38
RNF40-206ENST00000564260 LCN12Q6JVE5 192 aa12.7□□□□□ -0.38
RNF40-206ENST00000564260 TMEM14EPQ6UXP3 125 aa12.7□□□□□ -0.38
RNF40-206ENST00000564260 PRSS46E5RG02 174 aa12.69□□□□□ -0.38
RNF40-206ENST00000564260 K7EPK0 472 aa12.69□□□□□ -0.38
RNF40-206ENST00000564260 CFDP00746 253 aaPredicted RBP12.69□□□□□ -0.38
RNF40-206ENST00000564260 PET100P0DJ07 73 aa12.69□□□□□ -0.38
RNF40-206ENST00000564260 FOLR2P14207 255 aa12.69□□□□□ -0.38
RNF40-206ENST00000564260 SPNP16150 400 aa12.69□□□□□ -0.38
RNF40-206ENST00000564260 CBLN1P23435 193 aa12.69□□□□□ -0.38
RNF40-206ENST00000564260 OR10J1P30954 320 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms