RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 LINC00173Q6ZV60 143 aa10.52□□□□□ -0.73
CCDC187-201ENST00000563590 KCNE4Q8WWG9 221 aa10.52□□□□□ -0.73
CCDC187-201ENST00000563590 PGLYRP4Q96LB8 373 aa10.52□□□□□ -0.73
CCDC187-201ENST00000563590 NABP2Q9BQ15 211 aa10.52□□□□□ -0.73
CCDC187-201ENST00000563590 SFXN3Q9BWM7 321 aa10.52□□□□□ -0.73
CCDC187-201ENST00000563590 MPC1Q9Y5U8 109 aa10.52□□□□□ -0.73
CCDC187-201ENST00000563590 IGLC7A0M8Q6 106 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 TMEM238C9JI98 176 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 H3BUT2 72 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 C12orf54Q6X4T0 127 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 BPIFA4PQ86YQ2 179 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 MUC15Q8N387 334 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 TRAV5A0A0B4J249 113 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 M0R1B8 84 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 TBC1D28Q2M2D7 210 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 OR8A1Q8NGG7 326 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 TCF19Q9Y242 345 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 ACACBO00763 2458 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 MALRD1Q5VYJ5 2156 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 C7orf71A4D174 169 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 HIGD1CA8MV81 97 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 NPIPB11E5RHQ5 1161 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 NHLH1Q02575 133 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 Q6P435 159 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 TMEM108Q6UXF1 575 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 ADGRG4Q8IZF6 3080 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 NOTCH2Q04721 2471 aa10.51□□□□□ -0.73
CCDC187-201ENST00000563590 TAS2R45P59539 299 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 MLANAQ16655 118 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 ZNF497Q6ZNH5 498 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 LINC00596Q86U02 117 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 TMEM140Q9NV12 185 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 LSM4Q9Y4Z0 139 aaKnown RBP10.5□□□□□ -0.73
CCDC187-201ENST00000563590 F11RQ9Y624 299 aaKnown RBP10.5□□□□□ -0.73
CCDC187-201ENST00000563590 HTR1DP28221 377 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 Q8N976 141 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 OR13A1Q8NGR1 328 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 MAP1LC3CQ9BXW4 147 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 TMEM167BQ9NRX6 74 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 COL12A1Q99715 3063 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 TANC2Q9HCD6 1990 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 PTPRQQ9UMZ3 2332 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 LOC102723996A0A087X1L8 192 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 OOEPA6NGQ2 149 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 MPDU1O75352 247 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 GNG5P63218 68 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 OR52E5Q8NH55 327 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 SMIM12Q96EX1 92 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 TXNDC17Q9BRA2 123 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 CSTL1Q9H114 145 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 ZNF71Q9NQZ8 489 aaPredicted RBP10.5□□□□□ -0.73
CCDC187-201ENST00000563590 ZNF835Q9Y2P0 537 aa10.5□□□□□ -0.73
CCDC187-201ENST00000563590 LOC389332A0A1B0GUA5 103 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 K7EP13 123 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 OR5AL1P0C617 328 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 ARR3P36575 388 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 FER1L6-AS2Q96M78 137 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 TLN2Q9Y4G6 2542 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 SLC25A5P05141 298 aaKnown RBP10.49□□□□□ -0.73
CCDC187-201ENST00000563590 PYYP10082 97 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 PLP1P60201 277 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 GTF2H5Q6ZYL4 71 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 Q8N7P7 452 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 RBMXL3Q8N7X1 1067 aaKnown RBP10.49□□□□□ -0.73
CCDC187-201ENST00000563590 NEUROG1Q92886 237 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 TNFRSF19Q9NS68 423 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 SERTM2A0A1B0GWG4 89 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 COX7A2P2O60397 106 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 SPACA3Q8IXA5 215 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 PNKDQ8N490 385 aa10.49□□□□□ -0.73
CCDC187-201ENST00000563590 PEF1Q9UBV8 284 aaKnown RBP10.49□□□□□ -0.73
CCDC187-201ENST00000563590 AMMECR1Q9Y4X0 333 aaPredicted RBP10.49□□□□□ -0.73
CCDC187-201ENST00000563590 TRGV10A0A0A0MS01 117 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 TRAV8-6A0A0B4J262 113 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 AHRRA9YTQ3 701 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 ORM2P19652 201 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 ARF6P62330 175 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 SARAFQ96BY9 339 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 OR2V2Q96R30 315 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 METRNQ9UJH8 293 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 ANKHD1Q8IWZ3 2542 aaKnown RBP10.48□□□□□ -0.73
CCDC187-201ENST00000563590 NCKAP5O14513 1909 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 IZUMO1RA6ND01 250 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 P0C879 139 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 ZNF883P0CG24 379 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 BRWD1-AS2P59051 145 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 SMAGPQ0VAQ4 97 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 FOXC1Q12948 553 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 VWC2Q2TAL6 325 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 LRRC10Q5BKY1 277 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 VWA1Q6PCB0 445 aa10.48□□□□□ -0.73
CCDC187-201ENST00000563590 IGHV3-21A0A0B4J1V1 117 aa10.47□□□□□ -0.73
CCDC187-201ENST00000563590 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.47□□□□□ -0.73
CCDC187-201ENST00000563590 TOMM40O96008 361 aa10.47□□□□□ -0.73
CCDC187-201ENST00000563590 REG1BP48304 166 aa10.47□□□□□ -0.73
CCDC187-201ENST00000563590 FOXF2Q12947 444 aa10.47□□□□□ -0.73
CCDC187-201ENST00000563590 COX19Q49B96 90 aa10.47□□□□□ -0.73
CCDC187-201ENST00000563590 BHLHA15Q7RTS1 189 aaPredicted RBP10.47□□□□□ -0.73
CCDC187-201ENST00000563590 OR1N2Q8NGR9 330 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms