RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 AP3S2P59780 193 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 HSPE1P61604 102 aaKnown RBP4.41□□□□□ -1.7
CDH13-206ENST00000562601 SUPT4H1P63272 117 aaKnown RBP4.41□□□□□ -1.7
CDH13-206ENST00000562601 PRCDQ00LT1 54 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 DHODHQ02127 395 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 TMEM187Q14656 261 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 IL34Q6ZMJ4 242 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 LYZL2Q7Z4W2 148 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 ZNF429Q86V71 674 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 SLC35G3Q8N808 338 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 UBAC2Q8NBM4 344 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 OR9G4Q8NGQ1 327 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 OR5B3Q8NH48 314 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 ZNF502Q8TBZ5 544 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 RRNAD1Q96FB5 475 aaKnown RBP4.41□□□□□ -1.7
CDH13-206ENST00000562601 TMEM56Q96MV1 263 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 OR4C12Q96R67 309 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 ELOVL1Q9BW60 279 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 FLVCR2Q9UPI3 526 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 KCNIP3Q9Y2W7 256 aa4.41□□□□□ -1.7
CDH13-206ENST00000562601 F11RQ9Y624 299 aaKnown RBP4.41□□□□□ -1.7
CDH13-206ENST00000562601 HUWE1Q7Z6Z7 4374 aaKnown RBP4.4□□□□□ -1.7
CDH13-206ENST00000562601 IGHV3OR16-8A0A075B7F1 116 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 TRBV7-1A0A0A6YYK4 115 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 IZUMO1RA6ND01 250 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 F5H697 171 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 GGCTO75223 188 aaKnown RBP4.4□□□□□ -1.71
CDH13-206ENST00000562601 B3GALNT1O75752 331 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 FGF2P09038 288 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 IL7P13232 177 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 HOXA1P49639 335 aaPredicted RBP4.4□□□□□ -1.71
CDH13-206ENST00000562601 ERHP84090 104 aaKnown RBP4.4□□□□□ -1.71
CDH13-206ENST00000562601 TATDN3Q17R31 274 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 KLK9Q2XQG4 91 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 ANKRD55Q3KP44 614 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 Q56UQ5 140 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 THOC7Q6I9Y2 204 aaKnown RBP4.4□□□□□ -1.71
CDH13-206ENST00000562601 MZT2BQ6NZ67 158 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 ADAMTSL5Q6ZMM2 481 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 CADM3Q8N126 398 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 SCARB1Q8WTV0 552 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 CACNG8Q8WXS5 425 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 RBPMSQ93062 196 aaKnown RBP4.4□□□□□ -1.71
CDH13-206ENST00000562601 PINX1Q96BK5 328 aaKnown RBP4.4□□□□□ -1.71
CDH13-206ENST00000562601 SCGB3A2Q96PL1 93 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 SRSF8Q9BRL6 282 aaKnown RBP4.4□□□□□ -1.71
CDH13-206ENST00000562601 CHRDL1Q9BU40 450 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 PDCD10Q9BUL8 212 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 PLEKHA3Q9HB20 300 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.4□□□□□ -1.71
CDH13-206ENST00000562601 CACNG5Q9UF02 275 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 KLK9Q9UKQ9 250 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 ZNF256Q9Y2P7 627 aaPredicted RBP4.4□□□□□ -1.71
CDH13-206ENST00000562601 TMEM56-RWDD3S4R434 201 aa4.4□□□□□ -1.71
CDH13-206ENST00000562601 PRSS29PA6NIE9 313 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 CEBPZOSA8MTT3 80 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 I3L2K1 104 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 K7EIM0 57 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 PLA2G10O15496 165 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 CYB5BO43169 146 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 TGOLN2O43493 480 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 ZNF207O43670 478 aaKnown RBP4.39□□□□□ -1.71
CDH13-206ENST00000562601 SFT2D2O95562 160 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 MT-CO2P00403 227 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 ANXA3P12429 323 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 GP9P14770 177 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 BTCP35070 178 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 SNCAP37840 140 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 INSL3P51460 131 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 ELLP55199 621 aaPredicted RBP4.39□□□□□ -1.71
CDH13-206ENST00000562601 PPP1R1AQ13522 171 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 FAM106AQ4KMX7 169 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 PLET1Q6UQ28 207 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 UNQ9165/PRO28630Q6UXU0 137 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 HSD17B13Q7Z5P4 300 aaPredicted RBP4.39□□□□□ -1.71
CDH13-206ENST00000562601 LGI3Q8N145 548 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 OR1P1Q8NH06 330 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 VN1R17PQ8TDU5 208 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 GALNT14Q96FL9 552 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 CXorf58Q96LI9 332 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 ASCL2Q99929 193 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 ENY2Q9NPA8 101 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 HEYLQ9NQ87 328 aaPredicted RBP4.39□□□□□ -1.71
CDH13-206ENST00000562601 C21orf62Q9NYP8 219 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 THYN1Q9P016 225 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 PEMTQ9UBM1 199 aa4.39□□□□□ -1.71
CDH13-206ENST00000562601 NAP1L6A6NFF2 107 aa4.38□□□□□ -1.71
CDH13-206ENST00000562601 C2orf70A6NJV1 201 aa4.38□□□□□ -1.71
CDH13-206ENST00000562601 CENPXA8MT69 81 aa4.38□□□□□ -1.71
CDH13-206ENST00000562601 NDUFB6O95139 128 aa4.38□□□□□ -1.71
CDH13-206ENST00000562601 IGLV1-51P01701 117 aa4.38□□□□□ -1.71
CDH13-206ENST00000562601 CTSGP08311 255 aa4.38□□□□□ -1.71
CDH13-206ENST00000562601 HOXB5P09067 269 aa4.38□□□□□ -1.71
CDH13-206ENST00000562601 SULT1A3P0DMM9 295 aa4.38□□□□□ -1.71
CDH13-206ENST00000562601 SULT1A4P0DMN0 295 aa4.38□□□□□ -1.71
CDH13-206ENST00000562601 RNASE2P10153 161 aaKnown RBP4.38□□□□□ -1.71
CDH13-206ENST00000562601 FOLR2P14207 255 aa4.38□□□□□ -1.71
CDH13-206ENST00000562601 ANXA7P20073 488 aaKnown RBP4.38□□□□□ -1.71
CDH13-206ENST00000562601 SUB1P53999 127 aaKnown RBP eCLIP4.38□□□□□ -1.71
CDH13-206ENST00000562601 SPCS3P61009 180 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms