RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 S4R3C0 116 aa10.23□□□□□ -0.77
CDH1-204ENST00000562118 SEC14L6B5MCN3 397 aa10.22□□□□□ -0.77
CDH1-204ENST00000562118 TMEM50AO95807 157 aa10.22□□□□□ -0.77
CDH1-204ENST00000562118 CSN3P07498 182 aa10.22□□□□□ -0.77
CDH1-204ENST00000562118 NKX2-1P43699 371 aaPredicted RBP10.22□□□□□ -0.77
CDH1-204ENST00000562118 MFAP4P55083 255 aa10.22□□□□□ -0.77
CDH1-204ENST00000562118 PAX9P55771 341 aa10.22□□□□□ -0.77
CDH1-204ENST00000562118 SYNJ2BPP57105 145 aa10.22□□□□□ -0.77
CDH1-204ENST00000562118 DCTN2Q13561 401 aaKnown RBP10.22□□□□□ -0.77
CDH1-204ENST00000562118 ADAMTSL5Q6ZMM2 481 aa10.22□□□□□ -0.77
CDH1-204ENST00000562118 TMEM213A2RRL7 107 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 OR2T8A6NH00 312 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 PMS2P5A8MQ11 134 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 CCSO14618 274 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 CLN5O75503 358 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 OR2C1O95371 312 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 IGLV1-51P01701 117 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 MBPP02686 304 aaPredicted RBP10.21□□□□□ -0.77
CDH1-204ENST00000562118 C8orf88P0DMB2 117 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 SLC25A4P12235 298 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 ELLP55199 621 aaPredicted RBP10.21□□□□□ -0.77
CDH1-204ENST00000562118 TAS2R30P59541 319 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 KRTAP10-11P60412 298 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 CD69Q07108 199 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 PRSS54Q6PEW0 395 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 TMEM190Q8WZ59 177 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 SMIM8Q96KF7 97 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 C2orf50Q96LR7 162 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 OR4C12Q96R67 309 aa10.21□□□□□ -0.77
CDH1-204ENST00000562118 IGHV3-21A0A0B4J1V1 117 aa10.2□□□□□ -0.78
CDH1-204ENST00000562118 RPS10-NUDT3A0A1W2PQS6 291 aa10.2□□□□□ -0.78
CDH1-204ENST00000562118 NDUFA4O00483 81 aa10.2□□□□□ -0.78
CDH1-204ENST00000562118 GPX4P36969 197 aaPredicted RBP10.2□□□□□ -0.78
CDH1-204ENST00000562118 OPRK1P41145 380 aa10.2□□□□□ -0.78
CDH1-204ENST00000562118 NPBWR1P48145 328 aa10.2□□□□□ -0.78
CDH1-204ENST00000562118 POLR2GP62487 172 aaKnown RBP eCLIP10.2□□□□□ -0.78
CDH1-204ENST00000562118 OXA1LQ15070 435 aa10.2□□□□□ -0.78
CDH1-204ENST00000562118 TATDN3Q17R31 274 aa10.2□□□□□ -0.78
CDH1-204ENST00000562118 TMEM14EPQ6UXP3 125 aa10.2□□□□□ -0.78
CDH1-204ENST00000562118 UNQ9165/PRO28630Q6UXU0 137 aa10.2□□□□□ -0.78
CDH1-204ENST00000562118 CACNG8Q8WXS5 425 aa10.2□□□□□ -0.78
CDH1-204ENST00000562118 MAGT1Q9H0U3 335 aa10.2□□□□□ -0.78
CDH1-204ENST00000562118 C2orf70A6NJV1 201 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 TSC22D2O75157 780 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 IFNA10P01566 189 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 IGKV1-17P01599 117 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 IGLC1P0CG04 106 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 IAPPP10997 89 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 MLANAQ16655 118 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 ETFRF1Q6IPR1 90 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 PINX1Q96BK5 328 aaKnown RBP10.19□□□□□ -0.78
CDH1-204ENST00000562118 RAB40CQ96S21 281 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 ELOVL1Q9BW60 279 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 NMES1Q9C002 83 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 ZFAND3Q9H8U3 227 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 PEMTQ9UBM1 199 aa10.19□□□□□ -0.78
CDH1-204ENST00000562118 SORL1Q92673 2214 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 K7EMT4 169 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 K7EPK0 472 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 IGHV3-48P01763 117 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 H2BFSP57053 126 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 RPP30P78346 268 aaKnown RBP10.18□□□□□ -0.78
CDH1-204ENST00000562118 RELQ04864 619 aaPredicted RBP10.18□□□□□ -0.78
CDH1-204ENST00000562118 RGS21Q2M5E4 152 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 FAM106AQ4KMX7 169 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 Q56UQ5 140 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 GSG1LQ6UXU4 331 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 SLC16A13Q7RTY0 426 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 OR2K2Q8NGT1 345 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 ZC4H2Q9NQZ6 224 aa10.18□□□□□ -0.78
CDH1-204ENST00000562118 IGKV1D-37A0A075B6S9 117 aa10.17□□□□□ -0.78
CDH1-204ENST00000562118 TRAV30A0A087WSZ9 112 aa10.17□□□□□ -0.78
CDH1-204ENST00000562118 FNDC10F2Z333 226 aa10.17□□□□□ -0.78
CDH1-204ENST00000562118 WRBO00258 174 aa10.17□□□□□ -0.78
CDH1-204ENST00000562118 NUPL2O15504 423 aaKnown RBP10.17□□□□□ -0.78
CDH1-204ENST00000562118 SSSCA1O60232 199 aa10.17□□□□□ -0.78
CDH1-204ENST00000562118 GNG7O60262 68 aa10.17□□□□□ -0.78
CDH1-204ENST00000562118 SCAF4O95104 1147 aaKnown RBP10.17□□□□□ -0.78
CDH1-204ENST00000562118 RAB11AP62491 216 aa10.17□□□□□ -0.78
CDH1-204ENST00000562118 THAP8Q8NA92 274 aa10.17□□□□□ -0.78
CDH1-204ENST00000562118 MARC2Q969Z3 335 aa10.17□□□□□ -0.78
CDH1-204ENST00000562118 ZMAT5Q9UDW3 170 aaKnown RBP10.17□□□□□ -0.78
CDH1-204ENST00000562118 ALG5Q9Y673 324 aa10.17□□□□□ -0.78
CDH1-204ENST00000562118 C5orf51A6NDU8 294 aa10.16□□□□□ -0.78
CDH1-204ENST00000562118 SAP30O75446 220 aa10.16□□□□□ -0.78
CDH1-204ENST00000562118 EDN2P20800 178 aa10.16□□□□□ -0.78
CDH1-204ENST00000562118 RND2P52198 227 aa10.16□□□□□ -0.78
CDH1-204ENST00000562118 YPEL3P61236 119 aaPredicted RBP10.16□□□□□ -0.78
CDH1-204ENST00000562118 GAMTQ14353 236 aa10.16□□□□□ -0.78
CDH1-204ENST00000562118 ZNF600Q6ZNG1 722 aa10.16□□□□□ -0.78
CDH1-204ENST00000562118 UBAC2Q8NBM4 344 aa10.16□□□□□ -0.78
CDH1-204ENST00000562118 OR1S2Q8NGQ3 325 aa10.16□□□□□ -0.78
CDH1-204ENST00000562118 DAZ1Q9NQZ3 744 aaKnown RBP10.16□□□□□ -0.78
CDH1-204ENST00000562118 AURKAIP1Q9NWT8 199 aaPredicted RBP10.16□□□□□ -0.78
CDH1-204ENST00000562118 PSENENQ9NZ42 101 aa10.16□□□□□ -0.78
CDH1-204ENST00000562118 GSKIPQ9P0R6 139 aa10.16□□□□□ -0.78
CDH1-204ENST00000562118 UFC1Q9Y3C8 167 aa10.16□□□□□ -0.78
CDH1-204ENST00000562118 STRAPQ9Y3F4 350 aaKnown RBP10.16□□□□□ -0.78
CDH1-204ENST00000562118 IGKV1OR2-108A0A075B7D4 117 aa10.15□□□□□ -0.78
CDH1-204ENST00000562118 H3BP45 60 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms