RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PAX6P26367 422 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 MAS1LP35410 378 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 SNCAP37840 140 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 COMPP49747 757 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-210ENST00000561817 DSCR9P59020 149 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 SSTP61278 116 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 CCL20P78556 96 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 SERF2P84101 59 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 DEFB113Q30KQ7 82 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 LCE4AQ5TA78 99 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 SSX7Q7RTT5 188 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 MMD2Q8IY49 270 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 COMMD1Q8N668 190 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 FAM213BQ8TBF2 198 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 SCGB1C1Q8TD33 95 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 MBD3L1Q8WWY6 194 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 ASCL2Q99929 193 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 PLEKHA3Q9HB20 300 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 FBXO7Q9Y3I1 522 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 TBL2Q9Y4P3 447 aaKnown RBP5.2□□□□□ -1.58
CAPN3-210ENST00000561817 POLQO75417 2590 aa5.2□□□□□ -1.58
CAPN3-210ENST00000561817 FLNBO75369 2602 aaKnown RBP5.2□□□□□ -1.58
CAPN3-210ENST00000561817 APCP25054 2843 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 CENPVL3A0A0U1RRI6 287 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 A0A1W2PRD5 423 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 A0A1W2PRF3 423 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 A0A1W2PRM7 423 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 TMEM218A2RU14 115 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 KRBOX1C9JBD0 128 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 K7EQM0 130 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 TOX4O94842 621 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 YIF1AO95070 293 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 MOSP00540 346 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 ADCYAP1P18509 176 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 FGF7P21781 194 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 CEACAM3P40198 252 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 PCP4P48539 62 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 MFAP2P55001 183 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 RAB2AP61019 212 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 RAB11AP62491 216 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 TMEM41BQ5BJD5 291 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 PPP1R27Q86WC6 154 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 RPP25LQ8N5L8 163 aaKnown RBP5.19□□□□□ -1.58
CAPN3-210ENST00000561817 ZNF114Q8NC26 417 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 CLCC1Q96S66 551 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 P2RX4Q99571 388 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 MGST2Q99735 147 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 HINT2Q9BX68 163 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 NPCDR1Q9BY65 106 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 COMMD5Q9GZQ3 224 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 FBXL15Q9H469 300 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 TREM1Q9NP99 234 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 METTL1Q9UBP6 276 aaKnown RBP5.19□□□□□ -1.58
CAPN3-210ENST00000561817 FAM96BQ9Y3D0 163 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 HILPDAQ9Y5L2 63 aa5.19□□□□□ -1.58
CAPN3-210ENST00000561817 IGKV1OR2-108A0A075B7D4 117 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 BTBD17A6NE02 478 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 SEC14L6B5MCN3 397 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 H3BS24 57 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 NPFFO15130 113 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 MPDU1O75352 247 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 CLN5O75503 358 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 PRH1P02810 166 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 IFNA4P05014 189 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 LINC00869P0C866 280 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 SAA4P35542 130 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 GPX4P36969 197 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-210ENST00000561817 OPRK1P41145 380 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 RPL27AP46776 148 aaKnown RBP5.18□□□□□ -1.58
CAPN3-210ENST00000561817 FAM3BP58499 235 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-210ENST00000561817 CD69Q07108 199 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 ZNF616Q08AN1 781 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 SSX2Q16385 188 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 C5orf64Q2M2E5 130 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 FAM120AOSQ5T036 256 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 AKR1C8PQ5T2L2 129 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 RUSC1-AS1Q66K80 236 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 CCDC144NLQ6NUI1 221 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 ABHD5Q8WTS1 349 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 MALSU1Q96EH3 234 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 Q96MF0 132 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 GGTLC1Q9BX51 225 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 FNDC4Q9H6D8 234 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-210ENST00000561817 NPVFQ9HCQ7 196 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 ENY2Q9NPA8 101 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 MRPL36Q9P0J6 103 aaKnown RBP5.18□□□□□ -1.58
CAPN3-210ENST00000561817 SLC45A2Q9UMX9 530 aa5.18□□□□□ -1.58
CAPN3-210ENST00000561817 CARHSP1Q9Y2V2 147 aaKnown RBP5.18□□□□□ -1.58
CAPN3-210ENST00000561817 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.18□□□□□ -1.58
CAPN3-210ENST00000561817 ITPR2Q14571 2701 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 PRRC2AP48634 2157 aaKnown RBP5.17□□□□□ -1.58
CAPN3-210ENST00000561817 IGKV1D-37A0A075B6S9 117 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 IGHV1-69DA0A0B4J2H0 117 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 AGPAT2O15120 278 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 NBR2O15453 112 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 IGHV1-69P01742 117 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 MSMBP08118 114 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 OR13C7P0DN81 318 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 EGR2P11161 476 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-210ENST00000561817 SLC25A16P16260 332 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms