RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 C3orf84H3BNL1 204 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 YIF1AO95070 293 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 TMEM50AO95807 157 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 IGKV1-17P01599 117 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 AKR1C4P17516 323 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 TFPI2P48307 235 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 SPCS3P61009 180 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 DHODHQ02127 395 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 ANKRD55Q3KP44 614 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 FAM90A2PQ658T7 463 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 SLC16A13Q7RTY0 426 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 FAM24BQ8N5W8 94 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 TXN2Q99757 166 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 SPAG8Q99932 426 aaPredicted RBP9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 SRRQ9GZT4 340 aa9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 PUS1Q9Y606 427 aaKnown RBP eCLIP9.39□□□□□ -0.91
CHRNA3-208ENST00000561128 B3GALNT1O75752 331 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 SNCAP37840 140 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 OPRK1P41145 380 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 EWSR1Q01844 656 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 RELQ04864 619 aaPredicted RBP9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 BAK1Q16611 211 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 TIGITQ495A1 244 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 RBPMS2Q6ZRY4 209 aaKnown RBP9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 TMED4Q7Z7H5 227 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 APRG1Q8IVJ8 170 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 FAM219AQ8IW50 185 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 GBGT1Q8N5D6 347 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 TMEM116Q8NCL8 245 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 PDCD10Q9BUL8 212 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 GGTLC1Q9BX51 225 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 RABL2AQ9UBK7 228 aaPredicted RBP9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 RABL2BQ9UNT1 228 aa9.38□□□□□ -0.91
CHRNA3-208ENST00000561128 ATG12O94817 140 aa9.37□□□□□ -0.91
CHRNA3-208ENST00000561128 SLC24A4Q8NFF2 622 aa9.37□□□□□ -0.91
CHRNA3-208ENST00000561128 OR52E5Q8NH55 327 aa9.37□□□□□ -0.91
CHRNA3-208ENST00000561128 IL22RA2Q969J5 263 aa9.37□□□□□ -0.91
CHRNA3-208ENST00000561128 OVOL2Q9BRP0 275 aa9.37□□□□□ -0.91
CHRNA3-208ENST00000561128 VSIRQ9H7M9 311 aa9.37□□□□□ -0.91
CHRNA3-208ENST00000561128 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.37□□□□□ -0.91
CHRNA3-208ENST00000561128 SCP2D1Q9UJQ7 156 aa9.37□□□□□ -0.91
CHRNA3-208ENST00000561128 TENM2Q9NT68 2774 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 STARD9Q9P2P6 4700 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 CEBPZOSA8MTT3 80 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 CLN5O75503 358 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 IGLC1P0CG04 106 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 SULT1A3P0DMM9 295 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 SULT1A4P0DMN0 295 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 LYL1P12980 280 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 RPL35AP18077 110 aaKnown RBP9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 BTCP35070 178 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 CCR6P51684 374 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 RND2P52198 227 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 TNFRSF9Q07011 255 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 PPP1R1AQ13522 171 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 C2orf83Q53S99 150 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 PRSS54Q6PEW0 395 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 ZNF600Q6ZNG1 722 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 TCF24Q7RTU0 167 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 TOMM5Q8N4H5 51 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 DUSP18Q8NEJ0 188 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 OR4X1Q8NH49 305 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 RBKSQ9H477 322 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 MAP6D1Q9H9H5 199 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 ENY2Q9NPA8 101 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 HEYLQ9NQ87 328 aaPredicted RBP9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 HSPB7Q9UBY9 170 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 CSMD3Q7Z407 3707 aa9.36□□□□□ -0.91
CHRNA3-208ENST00000561128 LOC102724200A0A096LPH7 203 aaPredicted RBP9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 TRAV14DV4A0A0A6YYC5 116 aa9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 A0A0B4J2A0 478 aa9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 ZNF701M0R085 212 aaPredicted RBP9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 DFFBO76075 338 aa9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 NPY1RP25929 384 aa9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 NPBWR1P48145 328 aa9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 SMCO1Q147U7 214 aa9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 GSG1LQ6UXU4 331 aa9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 SHPKQ9UHJ6 478 aa9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 FLVCR2Q9UPI3 526 aa9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 DYNC2H1Q8NCM8 4307 aaKnown RBP9.35□□□□□ -0.91
CHRNA3-208ENST00000561128 CORTO00230 105 aa9.34□□□□□ -0.91
CHRNA3-208ENST00000561128 PITX3O75364 302 aa9.34□□□□□ -0.91
CHRNA3-208ENST00000561128 VAMP1P23763 118 aa9.34□□□□□ -0.91
CHRNA3-208ENST00000561128 HTR2BP41595 481 aa9.34□□□□□ -0.91
CHRNA3-208ENST00000561128 RBMS2Q15434 407 aaKnown RBP9.34□□□□□ -0.91
CHRNA3-208ENST00000561128 USF2Q15853 346 aaPredicted RBP9.34□□□□□ -0.91
CHRNA3-208ENST00000561128 WFDC3Q8IUB2 231 aa9.34□□□□□ -0.91
CHRNA3-208ENST00000561128 LGI3Q8N145 548 aa9.34□□□□□ -0.91
CHRNA3-208ENST00000561128 LINC00854A0A1B0GVQ3 168 aa9.33□□□□□ -0.92
CHRNA3-208ENST00000561128 OR4C46A6NHA9 309 aa9.33□□□□□ -0.92
CHRNA3-208ENST00000561128 MPTX1A8MV57 137 aa9.33□□□□□ -0.92
CHRNA3-208ENST00000561128 IAPPP10997 89 aa9.33□□□□□ -0.92
CHRNA3-208ENST00000561128 S100A5P33763 92 aa9.33□□□□□ -0.92
CHRNA3-208ENST00000561128 SUB1P53999 127 aaKnown RBP eCLIP9.33□□□□□ -0.92
CHRNA3-208ENST00000561128 DTD1Q8TEA8 209 aa9.33□□□□□ -0.92
CHRNA3-208ENST00000561128 NPIPB3Q92617 1050 aa9.33□□□□□ -0.92
CHRNA3-208ENST00000561128 IGKV1D-37A0A075B6S9 117 aa9.32□□□□□ -0.92
CHRNA3-208ENST00000561128 SFT2D2O95562 160 aa9.32□□□□□ -0.92
CHRNA3-208ENST00000561128 CRYBB3P26998 211 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms