RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 DBX1A6NMT0 343 aa10.13□□□□□ -0.79
IRF9-210ENST00000560542 SCGB2A1O75556 95 aa10.13□□□□□ -0.79
IRF9-210ENST00000560542 PGLYRP1O75594 196 aaPredicted RBP10.13□□□□□ -0.79
IRF9-210ENST00000560542 TNFAIP8O95379 198 aa10.13□□□□□ -0.79
IRF9-210ENST00000560542 IGHV3-48P01763 117 aa10.13□□□□□ -0.79
IRF9-210ENST00000560542 CBX5P45973 191 aa10.13□□□□□ -0.79
IRF9-210ENST00000560542 ERHP84090 104 aaKnown RBP10.13□□□□□ -0.79
IRF9-210ENST00000560542 OXA1LQ15070 435 aa10.13□□□□□ -0.79
IRF9-210ENST00000560542 RAB40CQ96S21 281 aa10.13□□□□□ -0.79
IRF9-210ENST00000560542 SEPSECSQ9HD40 501 aaKnown RBP10.13□□□□□ -0.79
IRF9-210ENST00000560542 RHBDL2Q9NX52 303 aa10.13□□□□□ -0.79
IRF9-210ENST00000560542 NACAE9PAV3 2078 aa10.13□□□□□ -0.79
IRF9-210ENST00000560542 ZNF705FA8MVS1 300 aaPredicted RBP10.12□□□□□ -0.79
IRF9-210ENST00000560542 CORTO00230 105 aa10.12□□□□□ -0.79
IRF9-210ENST00000560542 TMEM50AO95807 157 aa10.12□□□□□ -0.79
IRF9-210ENST00000560542 ZNF705DP0CH99 300 aaPredicted RBP10.12□□□□□ -0.79
IRF9-210ENST00000560542 ZNF705BP0CI00 300 aaPredicted RBP10.12□□□□□ -0.79
IRF9-210ENST00000560542 AP2S1P53680 142 aaPredicted RBP10.12□□□□□ -0.79
IRF9-210ENST00000560542 TNP2Q05952 138 aa10.12□□□□□ -0.79
IRF9-210ENST00000560542 NEDD8Q15843 81 aa10.12□□□□□ -0.79
IRF9-210ENST00000560542 C22orf42Q6IC83 251 aa10.12□□□□□ -0.79
IRF9-210ENST00000560542 DHRS11Q6UWP2 260 aa10.12□□□□□ -0.79
IRF9-210ENST00000560542 SCRT2Q9NQ03 307 aa10.12□□□□□ -0.79
IRF9-210ENST00000560542 SNRPD3P62318 126 aaKnown RBP10.11□□□□□ -0.79
IRF9-210ENST00000560542 PSMG4Q5JS54 123 aa10.11□□□□□ -0.79
IRF9-210ENST00000560542 C15orf53Q8NAA6 179 aa10.11□□□□□ -0.79
IRF9-210ENST00000560542 OR4A16Q8NH70 328 aa10.11□□□□□ -0.79
IRF9-210ENST00000560542 LGALS14Q8TCE9 139 aa10.11□□□□□ -0.79
IRF9-210ENST00000560542 NIPSNAP3BQ9BS92 247 aa10.11□□□□□ -0.79
IRF9-210ENST00000560542 XCL2Q9UBD3 114 aa10.11□□□□□ -0.79
IRF9-210ENST00000560542 DKK2Q9UBU2 259 aa10.11□□□□□ -0.79
IRF9-210ENST00000560542 TMED3Q9Y3Q3 217 aa10.11□□□□□ -0.79
IRF9-210ENST00000560542 RFNGQ9Y644 331 aa10.11□□□□□ -0.79
IRF9-210ENST00000560542 TRAV18A0A075B6X5 111 aa10.1□□□□□ -0.79
IRF9-210ENST00000560542 A0A087WXM4 84 aa10.1□□□□□ -0.79
IRF9-210ENST00000560542 INS-IGF2F8WCM5 200 aa10.1□□□□□ -0.79
IRF9-210ENST00000560542 HOXA1P49639 335 aaPredicted RBP10.1□□□□□ -0.79
IRF9-210ENST00000560542 HSPE1P61604 102 aaKnown RBP10.1□□□□□ -0.79
IRF9-210ENST00000560542 DHRS2Q13268 280 aa10.1□□□□□ -0.79
IRF9-210ENST00000560542 C6orf223Q8N319 242 aa10.1□□□□□ -0.79
IRF9-210ENST00000560542 SMIM30A4D0T7 59 aa10.09□□□□□ -0.79
IRF9-210ENST00000560542 H3BMM0 161 aa10.09□□□□□ -0.79
IRF9-210ENST00000560542 GPR31O00270 319 aa10.09□□□□□ -0.79
IRF9-210ENST00000560542 CLN5O75503 358 aa10.09□□□□□ -0.79
IRF9-210ENST00000560542 S100GP29377 79 aa10.09□□□□□ -0.79
IRF9-210ENST00000560542 SFXN4Q6P4A7 337 aa10.09□□□□□ -0.79
IRF9-210ENST00000560542 H2BFWTQ7Z2G1 175 aa10.09□□□□□ -0.79
IRF9-210ENST00000560542 SEC22AQ96IW7 307 aa10.09□□□□□ -0.79
IRF9-210ENST00000560542 AUNIPQ9H7T9 357 aa10.09□□□□□ -0.79
IRF9-210ENST00000560542 EHFQ9NZC4 300 aa10.09□□□□□ -0.79
IRF9-210ENST00000560542 HLA-DRB4P13762 266 aa10.08□□□□□ -0.8
IRF9-210ENST00000560542 SNCAP37840 140 aa10.08□□□□□ -0.8
IRF9-210ENST00000560542 EMP1P54849 157 aa10.08□□□□□ -0.8
IRF9-210ENST00000560542 FAM222AQ5U5X8 452 aa10.08□□□□□ -0.8
IRF9-210ENST00000560542 OR4X1Q8NH49 305 aa10.08□□□□□ -0.8
IRF9-210ENST00000560542 SLC25A38Q96DW6 304 aa10.08□□□□□ -0.8
IRF9-210ENST00000560542 ZNF2Q9BSG1 426 aaPredicted RBP10.08□□□□□ -0.8
IRF9-210ENST00000560542 VCX3AQ9NNX9 186 aa10.08□□□□□ -0.8
IRF9-210ENST00000560542 DIABLOQ9NR28 239 aa10.08□□□□□ -0.8
IRF9-210ENST00000560542 U3KQE9 123 aa10.08□□□□□ -0.8
IRF9-210ENST00000560542 HLA-DRB4X5D2U9 266 aa10.08□□□□□ -0.8
IRF9-210ENST00000560542 HERC1Q15751 4861 aa10.07□□□□□ -0.8
IRF9-210ENST00000560542 TRAV30A0A087WSZ9 112 aa10.07□□□□□ -0.8
IRF9-210ENST00000560542 NBDYA0A0U1RRE5 68 aa10.07□□□□□ -0.8
IRF9-210ENST00000560542 FAM90A26D6RGX4 464 aa10.07□□□□□ -0.8
IRF9-210ENST00000560542 SUB1P53999 127 aaKnown RBP eCLIP10.07□□□□□ -0.8
IRF9-210ENST00000560542 TAS2R46P59540 309 aa10.07□□□□□ -0.8
IRF9-210ENST00000560542 TMEM88Q6PEY1 159 aa10.07□□□□□ -0.8
IRF9-210ENST00000560542 GLMPQ8WWB7 406 aa10.07□□□□□ -0.8
IRF9-210ENST00000560542 TMEM230Q96A57 120 aa10.07□□□□□ -0.8
IRF9-210ENST00000560542 ATG101Q9BSB4 218 aa10.07□□□□□ -0.8
IRF9-210ENST00000560542 IFT46Q9NQC8 304 aa10.07□□□□□ -0.8
IRF9-210ENST00000560542 TXNL4BQ9NX01 149 aaKnown RBP10.07□□□□□ -0.8
IRF9-210ENST00000560542 SSR3Q9UNL2 185 aa10.07□□□□□ -0.8
IRF9-210ENST00000560542 SMIM18P0DKX4 95 aa10.06□□□□□ -0.8
IRF9-210ENST00000560542 NKX2-1P43699 371 aaPredicted RBP10.06□□□□□ -0.8
IRF9-210ENST00000560542 RPL5P46777 297 aaKnown RBP10.06□□□□□ -0.8
IRF9-210ENST00000560542 ALDH3B2P48448 385 aa10.06□□□□□ -0.8
IRF9-210ENST00000560542 PPP5CP53041 499 aa10.06□□□□□ -0.8
IRF9-210ENST00000560542 LPCAT3Q6P1A2 487 aa10.06□□□□□ -0.8
IRF9-210ENST00000560542 C16orf54Q6UWD8 224 aa10.06□□□□□ -0.8
IRF9-210ENST00000560542 CLUHP3Q96NS8 147 aa10.06□□□□□ -0.8
IRF9-210ENST00000560542 NRN1Q9NPD7 142 aa10.06□□□□□ -0.8
IRF9-210ENST00000560542 LRP1BQ9NZR2 4599 aa10.06□□□□□ -0.8
IRF9-210ENST00000560542 IGKV1-17P01599 117 aa10.05□□□□□ -0.8
IRF9-210ENST00000560542 FCER2P06734 321 aa10.05□□□□□ -0.8
IRF9-210ENST00000560542 HNRNPCP07910 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
IRF9-210ENST00000560542 HTN3P15516 51 aa10.05□□□□□ -0.8
IRF9-210ENST00000560542 RFX2P48378 723 aa10.05□□□□□ -0.8
IRF9-210ENST00000560542 SLC35G3Q8N808 338 aa10.05□□□□□ -0.8
IRF9-210ENST00000560542 OR6F1Q8NGZ6 308 aa10.05□□□□□ -0.8
IRF9-210ENST00000560542 FXYD6Q9H0Q3 95 aa10.05□□□□□ -0.8
IRF9-210ENST00000560542 ANAPC10Q9UM13 185 aa10.05□□□□□ -0.8
IRF9-210ENST00000560542 LOC100506127A0A0U1RQW1 187 aa10.04□□□□□ -0.8
IRF9-210ENST00000560542 GSTZ1O43708 216 aaPredicted RBP10.04□□□□□ -0.8
IRF9-210ENST00000560542 TMEM127O75204 238 aa10.04□□□□□ -0.8
IRF9-210ENST00000560542 OPRK1P41145 380 aa10.04□□□□□ -0.8
IRF9-210ENST00000560542 OR5H2Q8NGV7 314 aa10.04□□□□□ -0.8
IRF9-210ENST00000560542 ZNRF2Q8NHG8 242 aa10.04□□□□□ -0.8
IRF9-210ENST00000560542 MRGPRFQ96AM1 343 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms