RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 WDR54Q9H977 334 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 SH3BGRL2Q9UJC5 107 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 PSG11Q9UQ72 335 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 RNF24Q9Y225 148 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 ZNF835Q9Y2P0 537 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 ARID1AO14497 2285 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 NCKAP5O14513 1909 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 GTF3C1Q12789 2109 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 TRAV8-6A0A0B4J262 113 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 A0A1W2PR80 420 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 C7orf71A4D174 169 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 PSMB11A5LHX3 300 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 TMEM189A5PLL7 270 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 VWC2LB2RUY7 222 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 LEPROTL1O95214 131 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 NGFP01138 241 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 P04436 131 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 SP1P08047 785 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 ADH4P08319 380 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 OR9G9P0C7N8 305 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 FRMD6-AS1P0C7T7 363 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 GDF1P27539 372 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 SSR4P51571 173 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 BRWD1-AS2P59051 145 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 HBBP68871 147 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 NHLH1Q02575 133 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 CFHR1Q03591 330 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 HSD52Q0P140 79 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 MAJINQ3KP22 176 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 TMEM97Q5BJF2 176 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 PRAMEF5Q5TYX0 476 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 PRAMEF6Q5VXH4 476 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 RNASEKQ6P5S7 137 aaKnown RBP4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 DOLPP1Q86YN1 238 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 BPIFA4PQ86YQ2 179 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 MTURNQ8N3F0 131 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 GATD1Q8NB37 220 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 OR9G4Q8NGQ1 327 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 OR4A16Q8NH70 328 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 H1FXQ92522 213 aaKnown RBP4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 TMEM186Q96B77 213 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 GFRA4Q9GZZ7 299 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 RNASE7Q9H1E1 156 aaKnown RBP4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 PLEKHA3Q9HB20 300 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 PROK2Q9HC23 129 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 ZNF492Q9P255 531 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 WNT16Q9UBV4 365 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 FOXA2Q9Y261 457 aaPredicted RBP4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 LOXL2Q9Y4K0 774 aa4.85□□□□□ -1.63
SNRPA1-209ENST00000560307 RP1P56715 2156 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 PTPRBP23467 1997 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 IGHV1-24A0A0C4DH33 117 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 C15orf61A6NNL5 157 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 PATE3B3GLJ2 98 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 C12orf77C9JDV5 145 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 J3QR89 54 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 ZNF207O43670 478 aaKnown RBP4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 RBMXL2O75526 392 aaKnown RBP4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 SLPIP03973 132 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 PATE4P0C8F1 98 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 C8orf88P0DMB2 117 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 DEFA4P12838 97 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 HTR1DP28221 377 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 GPR12P47775 334 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 LGALS7P47929 136 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 MFAP2P55001 183 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 FXYD3Q14802 87 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 PSG5Q15238 335 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 POU2AF1Q16633 256 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 TCTEX1D4Q5JR98 221 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 C1orf185Q5T7R7 199 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 SHISA6Q6ZSJ9 500 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 C2orf91Q6ZV80 131 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 FA2HQ7L5A8 372 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 BHLHA15Q7RTS1 189 aaPredicted RBP4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 TMEM251Q8N6I4 163 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 C5orf17Q8NAS9 161 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 NUP35Q8NFH5 326 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 OR4X2Q8NGF9 303 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 PIFOQ8TCI5 191 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 URB1-AS1Q96HZ7 61 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 NABP2Q9BQ15 211 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 NDFIP1Q9BT67 221 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 SIGLEC8Q9NYZ4 499 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 JPT1Q9UK76 154 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 TCF19Q9Y242 345 aa4.84□□□□□ -1.63
SNRPA1-209ENST00000560307 DOCK11Q5JSL3 2073 aa4.84□□□□□ -1.64
SNRPA1-209ENST00000560307 A0A1B0GW15 77 aa4.83□□□□□ -1.64
SNRPA1-209ENST00000560307 A8MWL6 223 aa4.83□□□□□ -1.64
SNRPA1-209ENST00000560307 GGTLC3B5MD39 225 aa4.83□□□□□ -1.64
SNRPA1-209ENST00000560307 C2CD4DB7Z1M9 353 aa4.83□□□□□ -1.64
SNRPA1-209ENST00000560307 CXCL13O43927 109 aa4.83□□□□□ -1.64
SNRPA1-209ENST00000560307 SCRG1O75711 98 aa4.83□□□□□ -1.64
SNRPA1-209ENST00000560307 CT45A6P0DMU7 189 aa4.83□□□□□ -1.64
SNRPA1-209ENST00000560307 CT45A5P0DMU8 189 aa4.83□□□□□ -1.64
SNRPA1-209ENST00000560307 CT45A7P0DMV0 189 aa4.83□□□□□ -1.64
SNRPA1-209ENST00000560307 CCL3P10147 92 aa4.83□□□□□ -1.64
SNRPA1-209ENST00000560307 MGST1P10620 155 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms